FFCP PHASE1:Hg19::chr6:50789547..50789550,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7021|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11743|TSSclassifier=W|UniProt=|association_with_transcript=49bp_to_ENST00000489228_5end|description=CAGE_peak_12_at_TFAP2B_5end|id=chr6:50789547..50789550,+|ontology_enrichment_celltype=CL:0000239!1.42e-13!3;CL:1000615!1.42e-13!3;CL:0002306!1.42e-13!3;CL:1000507!4.57e-12!12;CL:1000494!4.57e-12!12;CL:0000075!9.11e-11!27;CL:0000242!7.46e-10!2;CL:0002367!1.82e-09!2;CL:1000449!7.01e-09!16;CL:0000312!3.76e-08!5;CL:1000497!8.08e-08!18;CL:0002518!8.08e-08!18;CL:0000240!7.45e-07!6;CL:0000311!7.45e-07!6;CL:0000079!7.45e-07!6;CL:0000237!7.45e-07!6;CL:0000036!7.45e-07!6;CL:0000357!7.45e-07!6;CL:0000114!7.45e-07!6;CL:0000197!9.46e-07!6;CL:0000098!9.46e-07!6;CL:0002167!9.46e-07!6;CL:0002077!9.88e-07!33|ontology_enrichment_celltype_v019=CL:0000333;2.17e-15;5!CL:0000123;1.64e-10;2!CL:0000242;1.64e-10;2!CL:0002367;2.85e-10;2!CL:1000507;4.18e-08;10!CL:1000494;4.18e-08;10!CL:0000239;2.88e-07;3!CL:1000615;2.88e-07;3!CL:0002306;2.88e-07;3|ontology_enrichment_celltype_v019_2=CL:0000242,1.57e-10,2;CL:0002367,2.49e-10,2;CL:1000507,3.76e-08,10;CL:1000494,3.76e-08,10;CL:0000239,2.79e-07,3;CL:1000615,2.79e-07,3;CL:0002306,2.79e-07,3|ontology_enrichment_development_v019=UBERON:0008425;1.71e-19;1!UBERON:0003918;2.57e-08;10!UBERON:0007687;2.57e-08;10|ontology_enrichment_disease=DOID:3095!1.09e-10!22;DOID:2994!1.09e-10!22;DOID:171!3.73e-07!10|ontology_enrichment_disease_v019=DOID:171;6.08e-29;10!DOID:3095;2.13e-13;22!DOID:2994;2.13e-13;22!DOID:169;5.42e-13;6|ontology_enrichment_disease_v019_2=DOID:171,8.12e-29,10;DOID:3095,2.42e-13,22;DOID:2994,2.42e-13,22;DOID:169,5.76e-13,6|ontology_enrichment_uberon=UBERON:0006853!1.42e-13!3;UBERON:0007685!1.42e-13!3;UBERON:0004134!1.42e-13!3;UBERON:0009773!4.57e-12!12;UBERON:0001231!4.57e-12!12;UBERON:0004810!4.57e-12!12;UBERON:0006555!3.47e-11!17;UBERON:0005103!3.47e-11!17;UBERON:0000083!3.47e-11!17;UBERON:0009201!3.47e-11!17;UBERON:0004819!3.47e-11!17;UBERON:0006553!3.47e-11!17;UBERON:0003074!3.47e-11!17;UBERON:0003060!3.47e-11!17;UBERON:0002113!3.69e-11!27;UBERON:0003918!3.69e-11!27;UBERON:0005095!3.69e-11!27;UBERON:0007687!3.69e-11!27;UBERON:0000080!1.65e-10!18;UBERON:0002120!1.65e-10!18;UBERON:0004875!1.65e-10!18;UBERON:0005721!1.65e-10!18;UBERON:0005754!1.65e-10!18;UBERON:0007297!1.65e-10!18;UBERON:0005969!1.82e-09!2;UBERON:0003956!1.82e-09!2;UBERON:0004876!2.34e-09!20;UBERON:0000489!3.73e-09!32;UBERON:0000058!4.57e-09!26;UBERON:0003135!5.65e-09!11;UBERON:0004211!7.01e-09!16;UBERON:0001285!7.01e-09!16;UBERON:0007684!7.01e-09!16;UBERON:0003220!7.01e-09!16;UBERON:0004208!7.01e-09!16;UBERON:0003887!7.30e-09!21|ontology_enrichment_uberon_v019=UBERON:0002346;8.11e-19;4!UBERON:0000923;8.11e-19;4!UBERON:0010316;8.11e-19;4!UBERON:0005291;8.11e-19;4!UBERON:0000013;2.17e-15;5!UBERON:0002410;2.17e-15;5!UBERON:0002050;2.90e-15;5!UBERON:0005423;2.90e-15;5!UBERON:0002113;1.95e-12;24!UBERON:0011143;1.95e-12;24!UBERON:0000489;2.38e-10;29!UBERON:0005969;2.85e-10;2!UBERON:0003956;2.85e-10;2!UBERON:0006554;5.15e-10;30!UBERON:0001008;5.15e-10;30!UBERON:0000010;5.64e-09;8!UBERON:0004211;4.18e-08;10!UBERON:0009773;4.18e-08;10!UBERON:0001231;4.18e-08;10!UBERON:0004810;4.18e-08;10!UBERON:0006853;2.88e-07;3!UBERON:0007685;2.88e-07;3!UBERON:0004134;2.88e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.34e-15,5;UBERON:0002410,2.34e-15,5;UBERON:0002113,1.55e-11,26;UBERON:0003918,1.55e-11,26;UBERON:0011143,1.55e-11,26;UBERON:0005095,1.55e-11,26;UBERON:0007687,1.55e-11,26;UBERON:0005969,2.49e-10,2;UBERON:0003956,2.49e-10,2;UBERON:0000489,1.00e-09,31;UBERON:0000010,5.87e-09,8;UBERON:0004810,3.76e-08,10;UBERON:0006853,2.79e-07,3;UBERON:0007685,2.79e-07,3;UBERON:0004134,2.79e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,0.630809660135739,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0.501689773854853,0.764628819135115,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13841952129715,0.349934720244983,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7021 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11743 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=49bp_to_ENST00000489228_5end | |||
|description=CAGE_peak_12_at_TFAP2B_5end | |||
|id=chr6:50789547..50789550,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.42e-13!3;CL:1000615!1.42e-13!3;CL:0002306!1.42e-13!3;CL:1000507!4.57e-12!12;CL:1000494!4.57e-12!12;CL:0000075!9.11e-11!27;CL:0000242!7.46e-10!2;CL:0002367!1.82e-09!2;CL:1000449!7.01e-09!16;CL:0000312!3.76e-08!5;CL:1000497!8.08e-08!18;CL:0002518!8.08e-08!18;CL:0000240!7.45e-07!6;CL:0000311!7.45e-07!6;CL:0000079!7.45e-07!6;CL:0000237!7.45e-07!6;CL:0000036!7.45e-07!6;CL:0000357!7.45e-07!6;CL:0000114!7.45e-07!6;CL:0000197!9.46e-07!6;CL:0000098!9.46e-07!6;CL:0002167!9.46e-07!6;CL:0002077!9.88e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.17e-15;5!CL:0000123;1.64e-10;2!CL:0000242;1.64e-10;2!CL:0002367;2.85e-10;2!CL:1000507;4.18e-08;10!CL:1000494;4.18e-08;10!CL:0000239;2.88e-07;3!CL:1000615;2.88e-07;3!CL:0002306;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.57e-10,2;CL:0002367,2.49e-10,2;CL:1000507,3.76e-08,10;CL:1000494,3.76e-08,10;CL:0000239,2.79e-07,3;CL:1000615,2.79e-07,3;CL:0002306,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.71e-19;1!UBERON:0003918;2.57e-08;10!UBERON:0007687;2.57e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!1.09e-10!22;DOID:2994!1.09e-10!22;DOID:171!3.73e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;6.08e-29;10!DOID:3095;2.13e-13;22!DOID:2994;2.13e-13;22!DOID:169;5.42e-13;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.12e-29,10;DOID:3095,2.42e-13,22;DOID:2994,2.42e-13,22;DOID:169,5.76e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0006853!1.42e-13!3;UBERON:0007685!1.42e-13!3;UBERON:0004134!1.42e-13!3;UBERON:0009773!4.57e-12!12;UBERON:0001231!4.57e-12!12;UBERON:0004810!4.57e-12!12;UBERON:0006555!3.47e-11!17;UBERON:0005103!3.47e-11!17;UBERON:0000083!3.47e-11!17;UBERON:0009201!3.47e-11!17;UBERON:0004819!3.47e-11!17;UBERON:0006553!3.47e-11!17;UBERON:0003074!3.47e-11!17;UBERON:0003060!3.47e-11!17;UBERON:0002113!3.69e-11!27;UBERON:0003918!3.69e-11!27;UBERON:0005095!3.69e-11!27;UBERON:0007687!3.69e-11!27;UBERON:0000080!1.65e-10!18;UBERON:0002120!1.65e-10!18;UBERON:0004875!1.65e-10!18;UBERON:0005721!1.65e-10!18;UBERON:0005754!1.65e-10!18;UBERON:0007297!1.65e-10!18;UBERON:0005969!1.82e-09!2;UBERON:0003956!1.82e-09!2;UBERON:0004876!2.34e-09!20;UBERON:0000489!3.73e-09!32;UBERON:0000058!4.57e-09!26;UBERON:0003135!5.65e-09!11;UBERON:0004211!7.01e-09!16;UBERON:0001285!7.01e-09!16;UBERON:0007684!7.01e-09!16;UBERON:0003220!7.01e-09!16;UBERON:0004208!7.01e-09!16;UBERON:0003887!7.30e-09!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.11e-19;4!UBERON:0000923;8.11e-19;4!UBERON:0010316;8.11e-19;4!UBERON:0005291;8.11e-19;4!UBERON:0000013;2.17e-15;5!UBERON:0002410;2.17e-15;5!UBERON:0002050;2.90e-15;5!UBERON:0005423;2.90e-15;5!UBERON:0002113;1.95e-12;24!UBERON:0011143;1.95e-12;24!UBERON:0000489;2.38e-10;29!UBERON:0005969;2.85e-10;2!UBERON:0003956;2.85e-10;2!UBERON:0006554;5.15e-10;30!UBERON:0001008;5.15e-10;30!UBERON:0000010;5.64e-09;8!UBERON:0004211;4.18e-08;10!UBERON:0009773;4.18e-08;10!UBERON:0001231;4.18e-08;10!UBERON:0004810;4.18e-08;10!UBERON:0006853;2.88e-07;3!UBERON:0007685;2.88e-07;3!UBERON:0004134;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.34e-15,5;UBERON:0002410,2.34e-15,5;UBERON:0002113,1.55e-11,26;UBERON:0003918,1.55e-11,26;UBERON:0011143,1.55e-11,26;UBERON:0005095,1.55e-11,26;UBERON:0007687,1.55e-11,26;UBERON:0005969,2.49e-10,2;UBERON:0003956,2.49e-10,2;UBERON:0000489,1.00e-09,31;UBERON:0000010,5.87e-09,8;UBERON:0004810,3.76e-08,10;UBERON:0006853,2.79e-07,3;UBERON:0007685,2.79e-07,3;UBERON:0004134,2.79e-07,3 | |||
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|short_description=p12@TFAP2B | |||
}} |
Revision as of 21:21, 13 September 2013
Short description: | p12@TFAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_TFAP2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000489228_5end |
EntrezGene: | TFAP2B |
HGNC: | 11743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.57e-10 | 2 |
trabecular meshwork cell | 2.49e-10 | 2 |
kidney tubule cell | 3.76e-08 | 10 |
nephron tubule epithelial cell | 3.76e-08 | 10 |
brush border epithelial cell | 2.79e-07 | 3 |
kidney cortex tubule cell | 2.79e-07 | 3 |
epithelial cell of proximal tubule | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.34e-15 | 5 |
autonomic nervous system | 2.34e-15 | 5 |
kidney | 1.55e-11 | 26 |
kidney mesenchyme | 1.55e-11 | 26 |
upper urinary tract | 1.55e-11 | 26 |
kidney rudiment | 1.55e-11 | 26 |
kidney field | 1.55e-11 | 26 |
reticulum trabeculare | 2.49e-10 | 2 |
aqueous drainage system | 2.49e-10 | 2 |
cavitated compound organ | 1.00e-09 | 31 |
peripheral nervous system | 5.87e-09 | 8 |
nephron tubule epithelium | 3.76e-08 | 10 |
renal cortex tubule | 2.79e-07 | 3 |
region of nephron tubule | 2.79e-07 | 3 |
proximal tubule | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.12e-29 | 10 |
germ cell and embryonal cancer | 2.42e-13 | 22 |
germ cell cancer | 2.42e-13 | 22 |
neuroendocrine tumor | 5.76e-13 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.