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FFCP PHASE1:Mm9::chr2:102241148..102241266,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=80985|HGNC=|UniProt=Q4KMS1,Q9QXA7|association_with_transcript=-91bp_to_ENSMUST00000102573,NM_020267,uc008lhv.1_5end|description=CAGE_peak_2_at_Trim44_5end|id=chr2:102241148..102241266,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.25e-10!94;UBERON:0007811!6.22e-09!86;UBERON:0003056!8.61e-09!49;UBERON:0002020!1.38e-08!34;UBERON:0002791!1.85e-08!29;UBERON:0003528!1.85e-08!29;UBERON:0001893!1.85e-08!29;UBERON:0003080!3.52e-08!40;UBERON:0002780!4.36e-08!39;UBERON:0001890!4.36e-08!39;UBERON:0006240!4.36e-08!39;UBERON:0000955!6.38e-08!50;UBERON:0006238!6.38e-08!50;UBERON:0000033!8.61e-08!63;UBERON:0001049!1.05e-07!52;UBERON:0005068!1.05e-07!52;UBERON:0006241!1.05e-07!52;UBERON:0007135!1.05e-07!52;UBERON:0002616!1.98e-07!49;UBERON:0002346!2.46e-07!71;UBERON:0003075!2.46e-07!71;UBERON:0007284!2.46e-07!71;UBERON:0001017!5.15e-07!73;UBERON:0005743!5.15e-07!73;UBERON:0000956!9.40e-07!21;UBERON:0001869!9.40e-07!21;UBERON:0000203!9.40e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0003056,8.60e-09,49;UBERON:0002020,1.38e-08,34;UBERON:0003528,1.85e-08,29;UBERON:0002791,1.85e-08,29;UBERON:0001893,1.85e-08,29;UBERON:0003080,3.52e-08,40;UBERON:0002780,4.35e-08,39;UBERON:0001890,4.35e-08,39;UBERON:0006240,4.35e-08,39;UBERON:0002346,6.35e-08,64;UBERON:0003075,6.35e-08,64;UBERON:0007284,6.35e-08,64;UBERON:0000073,8.81e-08,54;UBERON:0000955,1.03e-07,47;UBERON:0006238,1.03e-07,47;UBERON:0001049,1.05e-07,52;UBERON:0005068,1.05e-07,52;UBERON:0006241,1.05e-07,52;UBERON:0007135,1.05e-07,52;UBERON:0010371,3.05e-07,73;UBERON:0002616,3.21e-07,46;UBERON:0001017,5.14e-07,73;UBERON:0000956,9.39e-07,21;UBERON:0001869,9.39e-07,21;UBERON:0000203,9.39e-07,21|phase1_expression=12.1713123799643,0,0,0.90739263392049,0.500895729946347,2.51818907867835,2.56973904655078,7.48915275961142,10.98152032783,11.2350972634557,5.82141091966717,7.41881078656629,8.38883576662908,7.60557501045277,4.33042690360362,5.87178275430495,2.79824751251259,7.5710919685977,12.2031845909108,8.48779303596061,17.1787446105161,10.0283860712894,9.92559198727954,1.75991665072747,1.60586496747019,0.57423196411502,0,0.646413698057667,0.760093677825496,0.756090389279792,2.21730510655305,3.81018404075779,2.46025915033828,0,1.44425809875637,0.997407872150954,3.06254034393554,0.418531630736908,1.5626706890476,0,0,0.683045484958446,0,2.14024590558481,3.34543873024398,2.0190142737785,3.9119567217402,3.48840250208714,5.93152693383074,5.44403717407994,5.03951117851305,2.87505128729943,9.89917375740644,7.25362142011344,17.1407837562657,6.68874533693462,8.02293631828519,11.8604581223812,20.0293296251002,12.1667925232568,13.9442908771359,4.40497891689872,3.55717918444456,1.7997994345628,2.96659908770092,4.9733608046227,3.89480143673926,3.45796474789399,26.3371615263533,19.8458729347585,20.8221711737868,10.2834354385369,11.4851641294839,22.2933254571216,19.2649396746655,11.9498442259303,6.60695285996332,18.1316020080967,21.3513081226178,19.6510568717989,22.5059603261928,27.0874952689515,7.81712397203867,10.1297269805702,17.5717984943332,15.9099436155781,19.7896636310753,19.7583412574819,8.02697649331751,8.16172849153284,6.95674772884027,6.88339101585109,3.39985666853875,4.85732872474035,5.84798775702902,4.48026887097336,7.72444310724635,9.88495870952735,7.53379413348319,6.36011234118612,14.9294024963281,14.115912515575,20.3844191765317,0,2.59789249213457,2.53359865475099,4.04419556011827,11.5325718516251,18.125651855302,15.1410981846121,13.5318554877586,9.43842982767638,10.1470818792666,8.59119051149949,16.4624189989987,12.8179923156269,11.1237735480468,11.423349196673,9.73071607144862,12.9413479957927,10.1587098491781,8.24287930329878,0,17.8596286177044,16.9651832518899,3.57639877292028,11.0229914545447,4.79922184794726,8.76784566804146,16.027598416316,21.0450277296568,41.717244901471,26.7689453096106,26.8501230196847,19.7398642331582,24.3361894601636,26.3763952372319,11.9430691785689,10.108910337347,6.10281382070775,14.1831282829347,13.104419952708,16.5657159420921,17.0296444154358,22.9283002139975,21.2668775672851,21.4576949241779,9.05461797586555,12.7185115830377,16.8304411349359,19.5305747821983,13.1517439456545,15.5706459566335,21.9398864908965,16.4625709126355,21.2966665495788,4.91549231119264,4.11756651383544,5.11494298912067,10.3562886267751,13.3679854189225,13.6847166710371,17.992599904476,13.7734962223183,15.8895126274,13.4869687955237,11.267482858784,14.1286064264275,15.7977455916941,13.790066982644,14.5113169087082,12.1345989563026,11.4166059951346,12.2127841071938,24.3936340334388,42.1908910755066,1.98251269790279,3.17340679996253,17.7029247944244,17.8822237332538,17.2682398171605,11.6976444281539,8.67274370994994,6.65789691393957,6.16887780007865,6.25856027951241,8.29406189040889,7.36138946552258,8.96834800747953,2.69645822596266,3.8904848977445,4.77939055810481,8.15571974098251,17.1372768914593,18.0332377076929,17.514014194697,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|EntrezGene=80985
|HGNC=
|UniProt=Q4KMS1,Q9QXA7
|association_with_transcript=-91bp_to_ENSMUST00000102573,NM_020267,uc008lhv.1_5end
|description=CAGE_peak_2_at_Trim44_5end
|id=chr2:102241148..102241266,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.25e-10!94;UBERON:0007811!6.22e-09!86;UBERON:0003056!8.61e-09!49;UBERON:0002020!1.38e-08!34;UBERON:0002791!1.85e-08!29;UBERON:0003528!1.85e-08!29;UBERON:0001893!1.85e-08!29;UBERON:0003080!3.52e-08!40;UBERON:0002780!4.36e-08!39;UBERON:0001890!4.36e-08!39;UBERON:0006240!4.36e-08!39;UBERON:0000955!6.38e-08!50;UBERON:0006238!6.38e-08!50;UBERON:0000033!8.61e-08!63;UBERON:0001049!1.05e-07!52;UBERON:0005068!1.05e-07!52;UBERON:0006241!1.05e-07!52;UBERON:0007135!1.05e-07!52;UBERON:0002616!1.98e-07!49;UBERON:0002346!2.46e-07!71;UBERON:0003075!2.46e-07!71;UBERON:0007284!2.46e-07!71;UBERON:0001017!5.15e-07!73;UBERON:0005743!5.15e-07!73;UBERON:0000956!9.40e-07!21;UBERON:0001869!9.40e-07!21;UBERON:0000203!9.40e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0003056,8.60e-09,49;UBERON:0002020,1.38e-08,34;UBERON:0003528,1.85e-08,29;UBERON:0002791,1.85e-08,29;UBERON:0001893,1.85e-08,29;UBERON:0003080,3.52e-08,40;UBERON:0002780,4.35e-08,39;UBERON:0001890,4.35e-08,39;UBERON:0006240,4.35e-08,39;UBERON:0002346,6.35e-08,64;UBERON:0003075,6.35e-08,64;UBERON:0007284,6.35e-08,64;UBERON:0000073,8.81e-08,54;UBERON:0000955,1.03e-07,47;UBERON:0006238,1.03e-07,47;UBERON:0001049,1.05e-07,52;UBERON:0005068,1.05e-07,52;UBERON:0006241,1.05e-07,52;UBERON:0007135,1.05e-07,52;UBERON:0010371,3.05e-07,73;UBERON:0002616,3.21e-07,46;UBERON:0001017,5.14e-07,73;UBERON:0000956,9.39e-07,21;UBERON:0001869,9.39e-07,21;UBERON:0000203,9.39e-07,21
|phase1_expression=12.1713123799643,0,0,0.90739263392049,0.500895729946347,2.51818907867835,2.56973904655078,7.48915275961142,10.98152032783,11.2350972634557,5.82141091966717,7.41881078656629,8.38883576662908,7.60557501045277,4.33042690360362,5.87178275430495,2.79824751251259,7.5710919685977,12.2031845909108,8.48779303596061,17.1787446105161,10.0283860712894,9.92559198727954,1.75991665072747,1.60586496747019,0.57423196411502,0,0.646413698057667,0.760093677825496,0.756090389279792,2.21730510655305,3.81018404075779,2.46025915033828,0,1.44425809875637,0.997407872150954,3.06254034393554,0.418531630736908,1.5626706890476,0,0,0.683045484958446,0,2.14024590558481,3.34543873024398,2.0190142737785,3.9119567217402,3.48840250208714,5.93152693383074,5.44403717407994,5.03951117851305,2.87505128729943,9.89917375740644,7.25362142011344,17.1407837562657,6.68874533693462,8.02293631828519,11.8604581223812,20.0293296251002,12.1667925232568,13.9442908771359,4.40497891689872,3.55717918444456,1.7997994345628,2.96659908770092,4.9733608046227,3.89480143673926,3.45796474789399,26.3371615263533,19.8458729347585,20.8221711737868,10.2834354385369,11.4851641294839,22.2933254571216,19.2649396746655,11.9498442259303,6.60695285996332,18.1316020080967,21.3513081226178,19.6510568717989,22.5059603261928,27.0874952689515,7.81712397203867,10.1297269805702,17.5717984943332,15.9099436155781,19.7896636310753,19.7583412574819,8.02697649331751,8.16172849153284,6.95674772884027,6.88339101585109,3.39985666853875,4.85732872474035,5.84798775702902,4.48026887097336,7.72444310724635,9.88495870952735,7.53379413348319,6.36011234118612,14.9294024963281,14.115912515575,20.3844191765317,0,2.59789249213457,2.53359865475099,4.04419556011827,11.5325718516251,18.125651855302,15.1410981846121,13.5318554877586,9.43842982767638,10.1470818792666,8.59119051149949,16.4624189989987,12.8179923156269,11.1237735480468,11.423349196673,9.73071607144862,12.9413479957927,10.1587098491781,8.24287930329878,0,17.8596286177044,16.9651832518899,3.57639877292028,11.0229914545447,4.79922184794726,8.76784566804146,16.027598416316,21.0450277296568,41.717244901471,26.7689453096106,26.8501230196847,19.7398642331582,24.3361894601636,26.3763952372319,11.9430691785689,10.108910337347,6.10281382070775,14.1831282829347,13.104419952708,16.5657159420921,17.0296444154358,22.9283002139975,21.2668775672851,21.4576949241779,9.05461797586555,12.7185115830377,16.8304411349359,19.5305747821983,13.1517439456545,15.5706459566335,21.9398864908965,16.4625709126355,21.2966665495788,4.91549231119264,4.11756651383544,5.11494298912067,10.3562886267751,13.3679854189225,13.6847166710371,17.992599904476,13.7734962223183,15.8895126274,13.4869687955237,11.267482858784,14.1286064264275,15.7977455916941,13.790066982644,14.5113169087082,12.1345989563026,11.4166059951346,12.2127841071938,24.3936340334388,42.1908910755066,1.98251269790279,3.17340679996253,17.7029247944244,17.8822237332538,17.2682398171605,11.6976444281539,8.67274370994994,6.65789691393957,6.16887780007865,6.25856027951241,8.29406189040889,7.36138946552258,8.96834800747953,2.69645822596266,3.8904848977445,4.77939055810481,8.15571974098251,17.1372768914593,18.0332377076929,17.514014194697,16.8738663835834,22.0927832654503,22.3857341419871,18.4512684974503,14.4438829614065,12.9567022117891,7.11486305009157,7.67487486294033,5.50365186316968,3.37293168577281,6.8972441272091,3.85883455603867,4.83789118384698,6.61701116136864,9.72811360650212,9.33508804839477,31.629005436018,15.2577788544086,13.4176199439261,11.1134706296729,8.07288360848605,8.20153986317724,15.3345147838282,17.4332098828846,20.0446921023692,15.9560380628677,19.0099101113687,17.253144516507,17.853273066451,25.5625078693716,30.1083125242825,27.0186921371505,34.7611395673322,20.8106409688987,20.0314578964439,18.2257813812705,7.53956419696361,2.71952841909355,4.91764273019036,8.27810238914197,12.0412942490844,15.003095883802,9.83609672260053,7.57412781613119,9.78075480190396,7.41833614163613,15.2950612390287,17.2057534525837,17.8238939265915,17.2676683781188,13.3587531552715,12.8592577480977,22.5314033429518,28.9189184779626,15.7553494581178,21.5459380437379,25.2474786998043,13.857490329693,13.2745138339963,12.867373716214,13.9068836203785,11.3163047853539,9.7449624650655,12.604841065701,18.8652654012801,19.6308213917853,14.2598951353889,17.3820216864699,11.5960469432499,9.28219889233682,11.9153862013826,12.0640933000978,12.9358683782754,12.4315480318324,16.4926417287314,14.4478742257677,16.29035303961,7.30715877875038,5.39744928546534,9.53244318887191,7.71849393192367,19.2916915941532,16.4693715229824,14.6560407575419,9.19167048824151,10.9974402829191,4.95517422270746,16.6882771809459,9.7396402054776,16.5109494370578,11.2968661695524,5.65105371014073,6.42462870288818,7.0921233694022,16.1479508494163,13.1554365184239,14.9255971708778,4.77335309007557,16.9239756565907,17.0788352386553,16.2008011232702,12.9634743528971,8.95286511359328,12.1377911746339,13.6378201946804,4.71160695571253,4.14767914533737,4.97071450469541,3.38215763210514,21.8294157224209,14.7258056506817,18.4728628926845,20.9238914033924,18.247261553004,21.476374672173,20.0514752659683,14.8900269084509,6.28118714147616,6.62469014393091,16.7485893932934,15.0016659314722,13.8659792172517,15.0708154654242,16.8285093927433,15.8945083825012,18.6302946755952,15.359710826156,21.4048873890073,24.0813509029799,17.7454085840839,19.0042867442517,21.4552406857935,23.3753804363138,8.16229381014761,1.99787358036658,1.52513556236109,4.02923079273788,12.5573236120924,13.7008207079363,13.7363718200449,9.21784030039983,8.02515366456581,22.5900737046827,20.714635642823,23.4887160510153,26.980949627959,20.5524755931193,13.5970901530146,19.5756525067224,19.3638117386415,16.3131267234314,19.6748918465692,13.0772057956063,20.3502685434526,14.000155671839,15.0726164582342,15.9306003597267,14.7074806760011,12.2235700290888,16.8948746935893,20.859748623468,15.1618327058278,13.6878821940729,16.0332390178165,18.0728109416873,21.3844009032263,19.9875431965534,23.3383908728706,18.1938391733423,19.6767404872979,17.3076078337389,15.6030855342461,13.0290315906458,14.3755402989063,17.6442780561018,15.8427594129238,19.3865323655581,18.8690575598439,17.0123014771678,14.2057644176435,18.3335553691913,9.53941861818155,20.9983982079788,17.3367888980992,17.187703813127,16.1134314833405,15.046715656529,15.9878769880285,10.292990771598,14.8261027293326,12.4337415844748,9.48543102213917,11.8252596166415
|short_description=p2@Trim44
}}

Revision as of 21:26, 13 September 2013

Short description:p2@Trim44
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trim44_5end
Coexpression cluster:NA
Association with transcript: -91bp_to_ENSMUST00000102573, NM_020267, uc008lhv.1_5end
EntrezGene:Trim44
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trim44

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.42
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.39
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.20
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.90
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.14
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C320.03
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.34
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.85
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.82
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D827.09
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.76
Mouse Schwann, donor1.CNhs12507.11728-123D98.03
Mouse Schwann, donor2.CNhs12573.11746-123F98.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.53
accessory axillary lymph node, adult.CNhs10475.1063-29H918.13
adrenal gland, adult.CNhs10508.49-24D715.14
adrenal gland, embryo E14.CNhs11038.406-44C513.53
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F58.59
adrenal gland, neonate N00.CNhs11191.1311-23C116.46
adrenal gland, neonate N25.CNhs11223.1377-27I312.82
amnion, adult pregnant day17.5.CNhs10488.583-22A811.12
aorta, adult.CNhs10498.46-23H111.42
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F512.94
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I216.97
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.02
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.77
corpora quadrigemina, adult.CNhs10501.16-22A416.03
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F141.72
cortex, adult.CNhs10473.12-14D526.77
cortex, neonate N30.CNhs11107.1392-42F226.85
diencephalon, adult.CNhs10482.20-12F219.74
diencephalon, neonate N30.CNhs11201.1388-42B224.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B126.38
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.94
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C614.18
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C916.57
eyeball, embryo E17.CNhs11023.1261-18D417.03
eyeball, neonate N00.CNhs11207.633-15C622.93
eyeball, neonate N01.CNhs11140.1532-43E721.27
eyeball, neonate N02.CNhs11205.1551-44G821.46
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E212.72
forelimb, embryo E12.CNhs10600.359-14H216.83
forelimb, embryo E13.CNhs10589.384-1E219.53
forelimb, embryo E14.CNhs10577.413-26A813.15
forelimb, embryo E15.CNhs11007.437-20E715.57
forelimb, embryo E17.CNhs10598.1517-43C421.94
forelimb, embryo E18.CNhs11008.1520-43B516.46
gonad, embryo E13.CNhs11044.1564-45I621.30
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F513.37
heart, embryo E13.CNhs11013.376-3I913.68
heart, embryo E14.CNhs10597.403-26D417.99
heart, embryo E15.CNhs11017.431-16C813.77
heart, embryo E16.CNhs11021.457-17C615.89
heart, embryo E17.CNhs11025.479-18E513.49
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E314.13
heart, neonate N03.CNhs11221.1349-25I215.80
heart, neonate N10.CNhs11118.749-24G113.79
heart, neonate N16.CNhs11209.782-15G114.51
heart, neonate N20.CNhs11127.821-26I612.13
heart, neonate N25.CNhs11196.1351-25D311.42
heart, neonate N30.CNhs11202.1390-42D212.21
hippocampus, adult.CNhs10478.13-16E824.39
hippocampus, neonate N00.CNhs11228.627-43G142.19
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I517.70
intestine, embryo E13.CNhs11010.381-16D517.88
intestine, embryo E15.CNhs10602.976-16D817.27
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D38.67
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F817.14
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I217.51
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G722.09
kidney, neonate N10.CNhs11206.758-6D522.39
kidney, neonate N20.CNhs11113.832-19I118.45
kidney, neonate N25.CNhs11122.1353-25F314.44
kidney, neonate N30.CNhs11203.1385-42H112.96
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F87.67
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H215.26
liver, neonate N10.CNhs11115.751-24B913.42
liver, neonate N20.CNhs11220.823-25A311.11
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B115.33
lung, embryo E12.CNhs10522.354-16G217.43
lung, embryo E14.CNhs10604.404-26F820.04
lung, embryo E15.CNhs11020.432-17C515.96
lung, embryo E16.CNhs10998.458-17B619.01
lung, embryo E17.CNhs10605.480-44A617.25
lung, embryo E18.CNhs10583.1287-20I617.85
lung, neonate N00.CNhs11224.640-42C625.56
lung, neonate N06.CNhs11212.683-20E530.11
lung, neonate N07.CNhs11111.715-19A327.02
lung, neonate N10.CNhs11219.750-23E634.76
lung, neonate N20.CNhs11109.822-18A420.81
lung, neonate N25.CNhs11119.1359-25C720.03
lung, neonate N30.CNhs11133.1394-42H218.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A315.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.86
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.53
olfactory brain, adult.CNhs10489.18-22I928.92
ovary, adult.CNhs10507.91-2I715.76
ovary, embryo E18.CNhs11040.505-44H721.55
ovary, neonate N00.CNhs11217.1299-22I425.25
oviduct, adult pregnant day01.CNhs10500.988-6G613.86
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F412.87
pancreas, embryo E15.CNhs11042.1556-45F213.91
pancreas, embryo E16.CNhs11003.460-26E511.32
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G918.87
pancreas, neonate N01.CNhs11138.1531-43D719.63
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B617.38
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E612.06
pituitary gland, embryo E13.CNhs11009.370-44C712.94
pituitary gland, embryo E14.CNhs11037.398-44A512.43
pituitary gland, embryo E15.CNhs10592.427-16B916.49
pituitary gland, embryo E16.CNhs11036.449-43F614.45
pituitary gland, embryo E17.CNhs11039.1265-44F516.29
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G39.53
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C319.29
skin, neonate N00.CNhs11124.650-25G416.47
skin, neonate N03.CNhs11215.662-22H314.66
skin, neonate N06.CNhs11097.693-20I59.19
skin, neonate N10.CNhs11108.762-6C411.00
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C916.69
spleen, adult.CNhs10465.25-2G29.74
spleen, embryo E16.CNhs11035.461-43C116.51
spleen, embryo E18.CNhs11011.1271-21F211.30
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H16.42
spleen, neonate N25.CNhs11099.1354-25G37.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.93
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E316.92
stomach, embryo E15.CNhs10603.1252-16G817.08
stomach, embryo E16.CNhs11022.459-17D416.20
stomach, embryo E17.CNhs11006.1035-18D512.96
stomach, embryo E18.CNhs10999.1286-20C68.95
stomach, neonate N03.CNhs11193.1340-24B812.14
stomach, neonate N07.CNhs11210.718-18A913.64
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F521.83
testis, embryo E15.CNhs11034.443-27C514.73
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I520.92
testis, embryo E18.CNhs11027.503-18G518.25
testis, neonate N00.CNhs11189.1300-22B721.48
testis, neonate N07.CNhs11222.726-26I420.05
testis, neonate N10.CNhs11204.763-44D914.89
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B516.75
thymus, embryo E14.CNhs11041.402-44I415.00
thymus, embryo E15.CNhs11005.430-45I213.87
thymus, embryo E16.CNhs11002.456-26C515.07
thymus, embryo E17.CNhs10581.478-18C116.83
thymus, embryo E18.CNhs10595.1273-19G415.89
thymus, neonate N02.CNhs11181.1541-43F818.63
thymus, neonate N03.CNhs11137.2104-43C715.36
thymus, neonate N06.CNhs11197.681-26C421.40
thymus, neonate N07.CNhs11211.713-19D324.08
thymus, neonate N10.CNhs11194.748-24E417.75
thymus, neonate N20.CNhs11186.820-7A219.00
thymus, neonate N25.CNhs11125.1362-25G721.46
thymus, neonate N30.CNhs11132.1393-42G223.38
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E412.56
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E513.74
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I813.08
whole body, embryo E12.CNhs10587.857-27C920.35
whole body, embryo E13.CNhs10512.372-23H214.00
whole body, embryo E14.5.CNhs10578.420-27D215.07
whole body, embryo E14.CNhs10519.395-14B115.93
whole body, embryo E16.CNhs10514.453-14F214.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.86
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.69
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.87
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.11
whole body, embryo E17.5.CNhs10513.490-9F915.05
whole body, embryo E17.CNhs10517.475-3I515.99
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C612.43
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B411.83





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate8.60e-0949
gray matter1.38e-0834
brain grey matter1.85e-0829
regional part of telencephalon1.85e-0829
telencephalon1.85e-0829
anterior neural tube3.52e-0840
regional part of forebrain4.35e-0839
forebrain4.35e-0839
future forebrain4.35e-0839
neurectoderm6.35e-0864
neural plate6.35e-0864
presumptive neural plate6.35e-0864
regional part of nervous system8.81e-0854
brain1.03e-0747
future brain1.03e-0747
neural tube1.05e-0752
neural rod1.05e-0752
future spinal cord1.05e-0752
neural keel1.05e-0752
ecto-epithelium3.05e-0773
regional part of brain3.21e-0746
central nervous system5.14e-0773
cerebral cortex9.39e-0721
cerebral hemisphere9.39e-0721
pallium9.39e-0721







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