FFCP PHASE1:Hg19::chr6:64281529..64281540,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7803|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9634|TSSclassifier=W|UniProt=Q93096|association_with_transcript=-379bp_to_NM_003463,uc003pel.2_5end|coexpression_cluster_id=C73|description=CAGE_peak_46_at_PTP4A1_5end|id=chr6:64281529..64281540,+|ontology_enrichment_celltype=CL:0002150!1.98e-13!3;CL:0000861!1.98e-13!3;CL:0000624!1.35e-11!6|ontology_enrichment_celltype_v019=CL:0000815;1.43e-15;2!CL:0000792;1.43e-15;2!CL:0002677;1.43e-15;2!CL:0000898;7.78e-11;3|ontology_enrichment_celltype_v019_2=CL:0000815,1.54e-15,2;CL:0000792,1.54e-15,2;CL:0002677,1.54e-15,2;CL:0000898,8.17e-11,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.76e-21!9;UBERON:0001557!1.58e-15!19;UBERON:0001905!5.29e-10!2;UBERON:0002757!5.29e-10!2;UBERON:0010134!5.29e-10!2;UBERON:0002784!5.29e-10!2;UBERON:0005408!5.29e-10!2;UBERON:0001899!5.29e-10!2;UBERON:0008947!5.18e-07!38;UBERON:0003258!5.18e-07!38;UBERON:0000065!7.09e-07!53;UBERON:0000072!8.97e-07!46|ontology_enrichment_uberon_v019=UBERON:0001905;2.33e-57;2!UBERON:0002757;2.33e-57;2!UBERON:0010134;2.33e-57;2!UBERON:0005408;2.33e-57;2!UBERON:0001899;2.33e-57;2!UBERON:0003296;2.55e-29;4!UBERON:0010133;2.55e-29;4!UBERON:0002784;2.55e-29;4!UBERON:0001894;3.02e-17;7|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.69e-57,2;UBERON:0002757,2.69e-57,2;UBERON:0010134,2.69e-57,2;UBERON:0005408,2.69e-57,2;UBERON:0001899,2.69e-57,2;UBERON:0003296,2.74e-29,4;UBERON:0010133,2.74e-29,4;UBERON:0002784,2.74e-29,4;UBERON:0001894,3.15e-17,7;UBERON:0006222,3.15e-17,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.205601498999509,0,3.2592226663359,0.946895611469467,1.94826728407911,0,0,0,0.270803863765016,0,0,0,0,0,3.26230438956533,1.87278579662799,2.09071047609954,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677294319023596,0.584714536689484,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2138624198618,2.01770233331294,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p46@PTP4A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7803 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9634 | |||
|TSSclassifier=W | |||
|UniProt=Q93096 | |||
|association_with_transcript=-379bp_to_NM_003463,uc003pel.2_5end | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_46_at_PTP4A1_5end | |||
|id=chr6:64281529..64281540,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.98e-13!3;CL:0000861!1.98e-13!3;CL:0000624!1.35e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0000815;1.43e-15;2!CL:0000792;1.43e-15;2!CL:0002677;1.43e-15;2!CL:0000898;7.78e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.54e-15,2;CL:0000792,1.54e-15,2;CL:0002677,1.54e-15,2;CL:0000898,8.17e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.76e-21!9;UBERON:0001557!1.58e-15!19;UBERON:0001905!5.29e-10!2;UBERON:0002757!5.29e-10!2;UBERON:0010134!5.29e-10!2;UBERON:0002784!5.29e-10!2;UBERON:0005408!5.29e-10!2;UBERON:0001899!5.29e-10!2;UBERON:0008947!5.18e-07!38;UBERON:0003258!5.18e-07!38;UBERON:0000065!7.09e-07!53;UBERON:0000072!8.97e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.33e-57;2!UBERON:0002757;2.33e-57;2!UBERON:0010134;2.33e-57;2!UBERON:0005408;2.33e-57;2!UBERON:0001899;2.33e-57;2!UBERON:0003296;2.55e-29;4!UBERON:0010133;2.55e-29;4!UBERON:0002784;2.55e-29;4!UBERON:0001894;3.02e-17;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.69e-57,2;UBERON:0002757,2.69e-57,2;UBERON:0010134,2.69e-57,2;UBERON:0005408,2.69e-57,2;UBERON:0001899,2.69e-57,2;UBERON:0003296,2.74e-29,4;UBERON:0010133,2.74e-29,4;UBERON:0002784,2.74e-29,4;UBERON:0001894,3.15e-17,7;UBERON:0006222,3.15e-17,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.205601498999509,0,3.2592226663359,0.946895611469467,1.94826728407911,0,0,0,0.270803863765016,0,0,0,0,0,3.26230438956533,1.87278579662799,2.09071047609954,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677294319023596,0.584714536689484,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2138624198618,2.01770233331294,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p46@PTP4A1 | |||
}} |
Revision as of 21:34, 13 September 2013
Short description: | p46@PTP4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_46_at_PTP4A1_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -379bp_to_NM_003463, uc003pel.2_5end |
EntrezGene: | PTP4A1 |
HGNC: | 9634 |
UniProt: | Q93096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.54e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.54e-15 | 2 |
naive regulatory T cell | 1.54e-15 | 2 |
naive T cell | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.69e-57 | 2 |
regional part of epithalamus | 2.69e-57 | 2 |
secretory circumventricular organ | 2.69e-57 | 2 |
circumventricular organ | 2.69e-57 | 2 |
epithalamus | 2.69e-57 | 2 |
gland of diencephalon | 2.74e-29 | 4 |
neuroendocrine gland | 2.74e-29 | 4 |
regional part of diencephalon | 2.74e-29 | 4 |
diencephalon | 3.15e-17 | 7 |
future diencephalon | 3.15e-17 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.