FFCP PHASE1:Mm9::chr2:115891770..115891799,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=17536|HGNC=|MCL_coexpression_id=288|UniProt=P97367|association_with_transcript=-195bp_to_ENSMUST00000110907,ENSMUST00000110908_5end|description=CAGE_peak_25_at_Meis2_5end|id=chr2:115891770..115891799,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002259,5.53e-12,1;UBERON:0002314,5.53e-12,1;UBERON:0004061,5.53e-12,1;UBERON:0006777,5.53e-12,1;UBERON:0005882,5.53e-12,1;UBERON:0000369,5.93e-10,5;UBERON:0002435,5.93e-10,5;UBERON:0000204,5.93e-10,5;UBERON:0010082,5.93e-10,5;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0001896,9.80e-07,2;UBERON:0002298,9.80e-07,2;UBERON:0005290,9.80e-07,2;UBERON:0010096,9.80e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.883474163806454,0.61245399607477,1.15014565221884,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0.558365998002762,0,0,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,1.04853447583376,3.20250421973039,5.52879149296603,0.695297280769106,0.767146371990992,0.41557608911912,0.973447578406546,0.203678727700633,0,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0,0.187403449119458,0.517406741478031,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.308534225774757,0.465067889500816,0,0.233530684734339,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0.474529061544512,0,0.502670417600539,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,3.85585579706168,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0.741701208042039,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,1.90934123603023,0,0,0.216010681643603,0.418176592028937,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0,0.341467211508268,0,0,0.367687016900028,0,0.412070114477788,0.64183841918363,0,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.287177344778066,0.476293691283074,0,0.38581844092741,0.824171801606613,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p25@Meis2}} | ||
|EntrezGene=17536 | |||
|HGNC= | |||
|MCL_coexpression_id=288 | |||
|UniProt=P97367 | |||
|association_with_transcript=-195bp_to_ENSMUST00000110907,ENSMUST00000110908_5end | |||
|description=CAGE_peak_25_at_Meis2_5end | |||
|id=chr2:115891770..115891799,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002259,5.53e-12,1;UBERON:0002314,5.53e-12,1;UBERON:0004061,5.53e-12,1;UBERON:0006777,5.53e-12,1;UBERON:0005882,5.53e-12,1;UBERON:0000369,5.93e-10,5;UBERON:0002435,5.93e-10,5;UBERON:0000204,5.93e-10,5;UBERON:0010082,5.93e-10,5;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0001896,9.80e-07,2;UBERON:0002298,9.80e-07,2;UBERON:0005290,9.80e-07,2;UBERON:0010096,9.80e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.883474163806454,0.61245399607477,1.15014565221884,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0.558365998002762,0,0,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,1.04853447583376,3.20250421973039,5.52879149296603,0.695297280769106,0.767146371990992,0.41557608911912,0.973447578406546,0.203678727700633,0,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0,0.187403449119458,0.517406741478031,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.308534225774757,0.465067889500816,0,0.233530684734339,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0.474529061544512,0,0.502670417600539,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,3.85585579706168,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0.741701208042039,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,1.90934123603023,0,0,0.216010681643603,0.418176592028937,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0,0.341467211508268,0,0,0.367687016900028,0,0.412070114477788,0.64183841918363,0,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.287177344778066,0.476293691283074,0,0.38581844092741,0.824171801606613,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p25@Meis2 | |||
}} |
Revision as of 21:41, 13 September 2013
Short description: | p25@Meis2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_Meis2_5end |
Coexpression cluster: | MCL_coexpression_mm9:288 |
Association with transcript: | -195bp_to_ENSMUST00000110907, ENSMUST00000110908_5end |
EntrezGene: | Meis2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpora quadrigemina | 5.53e-12 | 1 |
midbrain tectum | 5.53e-12 | 1 |
neural tube mantle layer | 5.53e-12 | 1 |
tectal plate | 5.53e-12 | 1 |
neural tube alar plate | 5.53e-12 | 1 |
corpus striatum | 5.93e-10 | 5 |
striatum | 5.93e-10 | 5 |
ventral part of telencephalon | 5.93e-10 | 5 |
future corpus striatum | 5.93e-10 | 5 |
brain | 1.66e-08 | 47 |
future brain | 1.66e-08 | 47 |
medulla oblongata | 9.80e-07 | 2 |
brainstem | 9.80e-07 | 2 |
myelencephalon | 9.80e-07 | 2 |
future myelencephalon | 9.80e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.