FFCP PHASE1:Mm9::chr2:164286445..164286518,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66460|HGNC=|MCL_coexpression_id=462|UniProt=Q78S06,D6RE24,E9PXJ7,A2A5F8|association_with_transcript=0bp_to_ENSMUST00000054527,ENSMUST00000072452,ENSMUST00000138268,ENSMUST00000164863,NM_025575,uc008nur.1,uc008nus.1_5end|description=CAGE_peak_1_at_Sys1_5end|id=chr2:164286445..164286518,+|ontology_enrichment_celltype=CL:0000144!7.30e-16!121;CL:0000012!7.30e-16!121;CL:0002371!3.65e-15!118;CL:0000548!1.02e-13!115;CL:0000004!1.02e-13!115;CL:0000255!1.02e-13!115;CL:0000063!4.41e-13!66;CL:0000219!1.24e-11!54;CL:0002320!1.58e-09!46;CL:0000134!1.58e-09!46;CL:0000034!5.87e-08!97|ontology_enrichment_celltype_v019_2=CL:0000219,1.24e-11,54;CL:0002320,1.58e-09,46;CL:0000134,1.58e-09,46;CL:0000034,5.87e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.58e-09!46;UBERON:0002193!3.23e-09!48;UBERON:0002390!3.71e-08!45;UBERON:0003061!3.71e-08!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.58e-09,46;UBERON:0002193,3.23e-09,48;UBERON:0002405,3.23e-09,48;UBERON:0002390,3.71e-08,45;UBERON:0003061,3.71e-08,45|phase1_expression=22.1005409004616,70.1440569355116,98.7348349475293,57.7706643596045,70.626297922435,26.0212871463429,31.537706480396,47.2591363796169,30.2695752626083,28.7899367376052,35.4421194226795,26.4843567864517,48.9634087603248,48.1686417328676,26.9818907070687,23.6896062846096,16.7894850750755,62.4615087409311,61.1530373881595,62.8096684661085,17.2637879006672,22.1418821177974,21.4183827093927,34.3983709005824,57.3523202667925,82.6894028325629,49.1068675621345,42.0168903737484,55.8668853201739,39.8207605020691,54.7674361318603,40.0069324279568,38.7490816178279,15.8481681015439,14.1537293678125,18.9507495708681,15.9252097884648,69.8947823330636,51.5681327385708,45.5465657257204,74.7053989799388,58.7419117064263,58.2612423637384,20.0175940581168,19.1602400004883,25.5129985504737,86.0630478782843,46.875408621796,44.5962950950978,41.4135685028224,38.3562795253493,71.8762821824858,64.7640859382862,68.1840413490664,48.0614132773724,34.4727644288169,32.0917452731408,27.3306208907044,39.0470769459024,42.3192783417626,51.3403436840005,66.4135282855499,71.1435836888911,80.9909745553259,81.0870417304919,78.152812644071,68.9080254192331,105.660033963427,31.4179525294687,37.9366686712051,35.7552434297349,35.1350710816678,34.6763609294033,32.7050433903927,33.641760327401,55.1531271966013,22.0231761998777,20.8130361078856,21.6585211891303,32.5759130693579,32.0206752608434,31.2548022334056,21.217907924105,25.8870800614573,20.1693687065389,35.9446874277875,29.3285662446152,33.7382996943794,24.8381914132844,20.1020349884049,25.218210517046,46.4628893569949,36.0384806865108,38.8586297979228,26.6408331153544,25.0895056774508,25.9822177243741,28.2914335479576,34.8113246167844,30.7405429823996,27.8869971157827,46.1975318691544,35.6727335589304,28.4426681261332,53.9062692117923,54.2190112116711,47.5192978313896,26.3764762151029,37.2870552451927,16.7739617143252,20.1242979048718,29.8376168745898,23.9840117146301,23.6634545667617,20.1076689202055,17.4676561948249,31.8881508377342,15.3275318335106,25.6537060065464,18.9267214438469,23.1883594383413,18.4252596191384,33.550517019262,18.1524094147159,18.0124167859571,34.7421595083684,21.2072770375479,26.9956228947033,23.3809217814439,17.8250860891739,27.4500361691176,34.9319098873763,27.4642425903797,25.8272611903634,15.9996794310861,19.4689515681309,29.8389336081427,25.1302080632388,31.843067562643,16.8353484709179,15.4843327125617,23.4500146522142,19.6267721487831,17.1803492332715,18.9821832632205,19.7295129238669,20.4269759540209,23.2833033665114,17.6765754204931,14.9393803332577,22.3457927688215,28.2762494831572,22.2437799380478,22.984642990463,19.3435208223467,21.6947350832158,35.1106593656617,29.5950093181922,34.0996199274711,18.8484453007307,16.8858763186389,18.3663302690235,18.9395788468168,17.9055450890137,15.5809784016252,14.8821724640261,18.5108646965737,17.3980360127083,17.7724637906559,18.0584210487005,17.5108628619048,20.7603982143972,22.1745616443961,22.6808847705028,21.8701546506692,28.9161960785789,60.1362185030512,32.2629691329524,20.4756720513825,20.2045904518582,20.8765287341791,18.1515172161008,21.7930482967973,32.3383564391351,37.4877958620164,27.1753275294618,27.1442025504291,25.8643413653496,25.7352594997239,26.0657628509724,33.0691216308282,28.8754846218832,27.881181440103,21.478720370629,16.9061603509621,19.5505274731502,19.5892012039302,22.5135981847923,18.3385957660346,13.2849133181642,20.5668333472201,17.2756029490521,19.862326014839,19.0203420516347,20.2455764966599,14.1663130802458,17.0402501966342,16.8824011826692,22.4070749567649,16.1109836972454,18.159145398804,21.6903516418584,8.62609239164127,20.8398930694362,16.5379966750717,23.9949934049756,20.8100999685418,15.9206362049911,26.0501998134913,25.7708320007859,23.3039916312097,23.2550767512008,26.2853078083122,22.6133447546451,25.2326259339175,31.2213836572478,20.1772984455924,17.717175171902,19.7723913135284,22.4492741160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| ||
|EntrezGene=66460 | |||
|HGNC= | |||
|MCL_coexpression_id=462 | |||
|UniProt=Q78S06,D6RE24,E9PXJ7,A2A5F8 | |||
|association_with_transcript=0bp_to_ENSMUST00000054527,ENSMUST00000072452,ENSMUST00000138268,ENSMUST00000164863,NM_025575,uc008nur.1,uc008nus.1_5end | |||
|description=CAGE_peak_1_at_Sys1_5end | |||
|id=chr2:164286445..164286518,+ | |||
|ontology_enrichment_celltype=CL:0000144!7.30e-16!121;CL:0000012!7.30e-16!121;CL:0002371!3.65e-15!118;CL:0000548!1.02e-13!115;CL:0000004!1.02e-13!115;CL:0000255!1.02e-13!115;CL:0000063!4.41e-13!66;CL:0000219!1.24e-11!54;CL:0002320!1.58e-09!46;CL:0000134!1.58e-09!46;CL:0000034!5.87e-08!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.24e-11,54;CL:0002320,1.58e-09,46;CL:0000134,1.58e-09,46;CL:0000034,5.87e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.58e-09!46;UBERON:0002193!3.23e-09!48;UBERON:0002390!3.71e-08!45;UBERON:0003061!3.71e-08!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.58e-09,46;UBERON:0002193,3.23e-09,48;UBERON:0002405,3.23e-09,48;UBERON:0002390,3.71e-08,45;UBERON:0003061,3.71e-08,45 | |||
|phase1_expression=22.1005409004616,70.1440569355116,98.7348349475293,57.7706643596045,70.626297922435,26.0212871463429,31.537706480396,47.2591363796169,30.2695752626083,28.7899367376052,35.4421194226795,26.4843567864517,48.9634087603248,48.1686417328676,26.9818907070687,23.6896062846096,16.7894850750755,62.4615087409311,61.1530373881595,62.8096684661085,17.2637879006672,22.1418821177974,21.4183827093927,34.3983709005824,57.3523202667925,82.6894028325629,49.1068675621345,42.0168903737484,55.8668853201739,39.8207605020691,54.7674361318603,40.0069324279568,38.7490816178279,15.8481681015439,14.1537293678125,18.9507495708681,15.9252097884648,69.8947823330636,51.5681327385708,45.5465657257204,74.7053989799388,58.7419117064263,58.2612423637384,20.0175940581168,19.1602400004883,25.5129985504737,86.0630478782843,46.875408621796,44.5962950950978,41.4135685028224,38.3562795253493,71.8762821824858,64.7640859382862,68.1840413490664,48.0614132773724,34.4727644288169,32.0917452731408,27.3306208907044,39.0470769459024,42.3192783417626,51.3403436840005,66.4135282855499,71.1435836888911,80.9909745553259,81.0870417304919,78.152812644071,68.9080254192331,105.660033963427,31.4179525294687,37.9366686712051,35.7552434297349,35.1350710816678,34.6763609294033,32.7050433903927,33.641760327401,55.1531271966013,22.0231761998777,20.8130361078856,21.6585211891303,32.5759130693579,32.0206752608434,31.2548022334056,21.217907924105,25.8870800614573,20.1693687065389,35.9446874277875,29.3285662446152,33.7382996943794,24.8381914132844,20.1020349884049,25.218210517046,46.4628893569949,36.0384806865108,38.8586297979228,26.6408331153544,25.0895056774508,25.9822177243741,28.2914335479576,34.8113246167844,30.7405429823996,27.8869971157827,46.1975318691544,35.6727335589304,28.4426681261332,53.9062692117923,54.2190112116711,47.5192978313896,26.3764762151029,37.2870552451927,16.7739617143252,20.1242979048718,29.8376168745898,23.9840117146301,23.6634545667617,20.1076689202055,17.4676561948249,31.8881508377342,15.3275318335106,25.6537060065464,18.9267214438469,23.1883594383413,18.4252596191384,33.550517019262,18.1524094147159,18.0124167859571,34.7421595083684,21.2072770375479,26.9956228947033,23.3809217814439,17.8250860891739,27.4500361691176,34.9319098873763,27.4642425903797,25.8272611903634,15.9996794310861,19.4689515681309,29.8389336081427,25.1302080632388,31.843067562643,16.8353484709179,15.4843327125617,23.4500146522142,19.6267721487831,17.1803492332715,18.9821832632205,19.7295129238669,20.4269759540209,23.2833033665114,17.6765754204931,14.9393803332577,22.3457927688215,28.2762494831572,22.2437799380478,22.984642990463,19.3435208223467,21.6947350832158,35.1106593656617,29.5950093181922,34.0996199274711,18.8484453007307,16.8858763186389,18.3663302690235,18.9395788468168,17.9055450890137,15.5809784016252,14.8821724640261,18.5108646965737,17.3980360127083,17.7724637906559,18.0584210487005,17.5108628619048,20.7603982143972,22.1745616443961,22.6808847705028,21.8701546506692,28.9161960785789,60.1362185030512,32.2629691329524,20.4756720513825,20.2045904518582,20.8765287341791,18.1515172161008,21.7930482967973,32.3383564391351,37.4877958620164,27.1753275294618,27.1442025504291,25.8643413653496,25.7352594997239,26.0657628509724,33.0691216308282,28.8754846218832,27.881181440103,21.478720370629,16.9061603509621,19.5505274731502,19.5892012039302,22.5135981847923,18.3385957660346,13.2849133181642,20.5668333472201,17.2756029490521,19.862326014839,19.0203420516347,20.2455764966599,14.1663130802458,17.0402501966342,16.8824011826692,22.4070749567649,16.1109836972454,18.159145398804,21.6903516418584,8.62609239164127,20.8398930694362,16.5379966750717,23.9949934049756,20.8100999685418,15.9206362049911,26.0501998134913,25.7708320007859,23.3039916312097,23.2550767512008,26.2853078083122,22.6133447546451,25.2326259339175,31.2213836572478,20.1772984455924,17.717175171902,19.7723913135284,22.4492741160561,25.9027472798843,23.7224456073679,34.6819953060326,69.6199275287948,23.6046851049137,20.6952559728549,20.5504755184374,23.3251256318484,38.6886471088954,21.7124997395761,13.2513452154828,17.9601822376454,12.4945570685023,15.7719406648684,18.0466926006739,16.9845918473299,12.9539424535966,16.3663280430335,12.6492088942888,23.4564560987919,20.1554920995741,35.7911863371183,31.6000701145938,24.2506080769627,30.5313818181915,28.6481150662878,28.7207379116513,26.2161060860698,34.5503214670504,27.3617281670095,26.3596859031586,31.627434464543,23.8853243517763,26.2310509086727,31.6255825724996,26.8152412445286,29.2778060948258,24.6683698822895,27.941475697075,26.3634553088859,23.0542303734956,31.3929118979644,25.9987452551351,42.0161629778147,18.7737366450968,39.8244293223982,33.7408449024092,21.9298716412168,23.4123418709063,18.3351291781594,24.5907028646461,18.3837807714469,26.2332752966866,22.8073121472927,31.269371186007,34.6729938178214,26.8532064686082,19.5903195284879,20.0940514749907,28.8260498240219,30.0861821089124,29.9496107972628,33.0297937392573,35.3228128665592,2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| |||
|short_description=p1@Sys1 | |||
}} |
Revision as of 22:52, 13 September 2013
Short description: | p1@Sys1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sys1_5end |
Coexpression cluster: | MCL_coexpression_mm9:462 |
Association with transcript: | 0bp_to_ENSMUST00000054527, ENSMUST00000072452, ENSMUST00000138268, ENSMUST00000164863, NM_025575, uc008nur.1, uc008nus.1_5end |
EntrezGene: | Sys1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.24e-11 | 54 |
connective tissue cell | 1.58e-09 | 46 |
mesenchymal cell | 1.58e-09 | 46 |
stem cell | 5.87e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.58e-09 | 46 |
hemolymphoid system | 3.23e-09 | 48 |
immune system | 3.23e-09 | 48 |
hematopoietic system | 3.71e-08 | 45 |
blood island | 3.71e-08 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.