FFCP PHASE1:Hg19::chr7:12726445..12726454,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10124|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=695|TSSclassifier=S|UniProt=P40617|association_with_transcript=0bp_to_NM_001037164,NM_212460_5end|coexpression_cluster_id=C1|description=CAGE_peak_7_at_ARL4A_5end|id=chr7:12726445..12726454,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10|ontology_enrichment_disease=DOID:14566!1.89e-07!239;DOID:305!5.35e-07!106;DOID:162!6.15e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0.264145302039678,0,0.288239906833923,0,0.126995788584338,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0.329607748453519,0.211125408127993,0,0,0,0,0.123084805461069,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0.843992258112108,0.163232808159148,0,0,0,0,0,0,0.247127877893006,0.208843899010911,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0.0801588202515337,0,0,0.288180834308212,0.229073192331831,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.16147564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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=695 | |||
|TSSclassifier=S | |||
|UniProt=P40617 | |||
|association_with_transcript=0bp_to_NM_001037164,NM_212460_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_7_at_ARL4A_5end | |||
|id=chr7:12726445..12726454,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease=DOID:14566!1.89e-07!239;DOID:305!5.35e-07!106;DOID:162!6.15e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0.264145302039678,0,0.288239906833923,0,0.126995788584338,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0.329607748453519,0.211125408127993,0,0,0,0,0.123084805461069,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0.843992258112108,0.163232808159148,0,0,0,0,0,0,0.247127877893006,0.208843899010911,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0.0801588202515337,0,0,0.288180834308212,0.229073192331831,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.354581522651905,0,0,0.157115589916002,0,0,0,0,0,0.158013611732727,0,0.347716544605159,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0,0.098150233615243,0,0,0,1.1598144313382,0,0,0,0.713520544665411,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0.0802413666891683,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,3.48582011803901,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p7@ARL4A | |||
}} |
Revision as of 23:04, 13 September 2013
Short description: | p7@ARL4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ARL4A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_001037164, NM_212460_5end |
EntrezGene: | ARL4A |
HGNC: | 695 |
UniProt: | P40617 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
cuboidal epithelium | 3.42e-11 | 4 |
transparent eye structure | 3.42e-11 | 4 |
simple cuboidal epithelium | 3.42e-11 | 4 |
cranial placode | 3.42e-11 | 4 |
lens of camera-type eye | 3.42e-11 | 4 |
epithelium of lens | 3.42e-11 | 4 |
lens placode | 3.42e-11 | 4 |
lens vesicle | 3.42e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.