FFCP PHASE1:Mm9::chr2:24950645..24950658,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=241275|HGNC=|MCL_coexpression_id=1221|UniProt=Q8CJ00|association_with_transcript=0bp_to_ENSMUST00000114373_5end|description=CAGE_peak_2_at_Noxa1_5end|id=chr2:24950645..24950658,-|ontology_enrichment_celltype=CL:0002563!9.88e-11!9;CL:0002251!9.88e-11!9;CL:0000075!4.57e-08!7;CL:0000239!3.05e-07!6;CL:0000677!3.05e-07!6;CL:0000212!3.05e-07!6;CL:0000584!3.05e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.62e-19,9;CL:0002251,2.62e-19,9;CL:0000239,3.90e-11,6;CL:0000677,3.90e-11,6;CL:0000584,3.90e-11,6;CL:0002076,4.75e-11,15;CL:0002250,4.16e-10,3;CL:0000075,1.67e-09,7;CL:0000066,1.72e-09,25;CL:0000223,5.90e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.51e-34!59;UBERON:0000160!4.07e-30!43;UBERON:0001007!1.49e-21!128;UBERON:0001555!1.49e-21!128;UBERON:0007026!1.49e-21!128;UBERON:0004119!6.74e-21!130;UBERON:0000925!6.74e-21!130;UBERON:0006595!6.74e-21!130;UBERON:0004921!6.43e-20!126;UBERON:0004185!6.43e-20!126;UBERON:0000344!1.97e-16!15;UBERON:0001242!1.79e-14!13;UBERON:0000060!1.79e-14!13;UBERON:0001262!1.79e-14!13;UBERON:0004786!1.79e-14!13;UBERON:0003350!9.88e-11!9;UBERON:0004808!9.88e-11!9;UBERON:0001277!9.88e-11!9;UBERON:0004923!1.68e-10!24;UBERON:0002108!1.83e-10!16;UBERON:0000485!3.33e-10!11;UBERON:0001045!8.10e-08!13;UBERON:0001264!8.81e-07!12;UBERON:0003922!8.81e-07!12;UBERON:0002114!8.81e-07!12;UBERON:0003923!8.81e-07!12;UBERON:0003924!8.81e-07!12;UBERON:0003921!8.81e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.76e-29,15;UBERON:0001242,1.37e-24,13;UBERON:0001262,1.37e-24,13;UBERON:0004786,1.37e-24,13;UBERON:0000160,1.49e-22,31;UBERON:0003350,2.62e-19,9;UBERON:0004808,2.62e-19,9;UBERON:0001277,2.62e-19,9;UBERON:0005409,1.35e-17,47;UBERON:0004923,2.99e-17,24;UBERON:0000485,1.48e-15,11;UBERON:0002108,3.60e-11,4;UBERON:0001264,1.51e-10,12;UBERON:0000331,4.34e-09,3;UBERON:0002116,4.34e-09,3;UBERON:0001204,4.34e-09,3;UBERON:0001168,4.34e-09,3;UBERON:0001007,6.25e-07,116;UBERON:0001555,6.25e-07,116;UBERON:0007026,6.25e-07,116;UBERON:0001155,6.69e-07,2;UBERON:0000059,6.69e-07,2;UBERON:0004119,9.82e-07,118;UBERON:0000925,9.82e-07,118;UBERON:0006595,9.82e-07,118|phase1_expression=0,4.18770489167233,3.63999391511629,0.90739263392049,1.00179145989269,1.6787927191189,2.10251376535973,0.645616617207881,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,2.07990149631429,2.06468352960453,1.72269589234506,0.86152399231815,2.80112602491656,1.71021077510736,3.52842181663903,4.21287970245079,0,0,0,8.95440021228951,10.3065480122265,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,1.00534083520108,0.198956472041151,0.19496408711912,0.898819408654221,3.6743468478698,1.7922714592893,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.780534591431195,0,0.44292937929755,1.11618338060241,0.163863314715738,0.863424909329478,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,1.31976098378028,0,3.64170954232472,3.93020624054176,4.14931175462976,2.36241514304618,1.84461088766356,0.516856586336442,1.45413491791002,2.13898427030833,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,1.1659233465194,0,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,2.86401185404534,0,0.609958401380546,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.661227645802687,0.26175594198403,6.99920855775682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,3.47988086107804,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p2@Noxa1}} | ||
|EntrezGene=241275 | |||
|HGNC= | |||
|MCL_coexpression_id=1221 | |||
|UniProt=Q8CJ00 | |||
|association_with_transcript=0bp_to_ENSMUST00000114373_5end | |||
|description=CAGE_peak_2_at_Noxa1_5end | |||
|id=chr2:24950645..24950658,- | |||
|ontology_enrichment_celltype=CL:0002563!9.88e-11!9;CL:0002251!9.88e-11!9;CL:0000075!4.57e-08!7;CL:0000239!3.05e-07!6;CL:0000677!3.05e-07!6;CL:0000212!3.05e-07!6;CL:0000584!3.05e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.62e-19,9;CL:0002251,2.62e-19,9;CL:0000239,3.90e-11,6;CL:0000677,3.90e-11,6;CL:0000584,3.90e-11,6;CL:0002076,4.75e-11,15;CL:0002250,4.16e-10,3;CL:0000075,1.67e-09,7;CL:0000066,1.72e-09,25;CL:0000223,5.90e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.51e-34!59;UBERON:0000160!4.07e-30!43;UBERON:0001007!1.49e-21!128;UBERON:0001555!1.49e-21!128;UBERON:0007026!1.49e-21!128;UBERON:0004119!6.74e-21!130;UBERON:0000925!6.74e-21!130;UBERON:0006595!6.74e-21!130;UBERON:0004921!6.43e-20!126;UBERON:0004185!6.43e-20!126;UBERON:0000344!1.97e-16!15;UBERON:0001242!1.79e-14!13;UBERON:0000060!1.79e-14!13;UBERON:0001262!1.79e-14!13;UBERON:0004786!1.79e-14!13;UBERON:0003350!9.88e-11!9;UBERON:0004808!9.88e-11!9;UBERON:0001277!9.88e-11!9;UBERON:0004923!1.68e-10!24;UBERON:0002108!1.83e-10!16;UBERON:0000485!3.33e-10!11;UBERON:0001045!8.10e-08!13;UBERON:0001264!8.81e-07!12;UBERON:0003922!8.81e-07!12;UBERON:0002114!8.81e-07!12;UBERON:0003923!8.81e-07!12;UBERON:0003924!8.81e-07!12;UBERON:0003921!8.81e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.76e-29,15;UBERON:0001242,1.37e-24,13;UBERON:0001262,1.37e-24,13;UBERON:0004786,1.37e-24,13;UBERON:0000160,1.49e-22,31;UBERON:0003350,2.62e-19,9;UBERON:0004808,2.62e-19,9;UBERON:0001277,2.62e-19,9;UBERON:0005409,1.35e-17,47;UBERON:0004923,2.99e-17,24;UBERON:0000485,1.48e-15,11;UBERON:0002108,3.60e-11,4;UBERON:0001264,1.51e-10,12;UBERON:0000331,4.34e-09,3;UBERON:0002116,4.34e-09,3;UBERON:0001204,4.34e-09,3;UBERON:0001168,4.34e-09,3;UBERON:0001007,6.25e-07,116;UBERON:0001555,6.25e-07,116;UBERON:0007026,6.25e-07,116;UBERON:0001155,6.69e-07,2;UBERON:0000059,6.69e-07,2;UBERON:0004119,9.82e-07,118;UBERON:0000925,9.82e-07,118;UBERON:0006595,9.82e-07,118 | |||
|phase1_expression=0,4.18770489167233,3.63999391511629,0.90739263392049,1.00179145989269,1.6787927191189,2.10251376535973,0.645616617207881,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,2.07990149631429,2.06468352960453,1.72269589234506,0.86152399231815,2.80112602491656,1.71021077510736,3.52842181663903,4.21287970245079,0,0,0,8.95440021228951,10.3065480122265,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,1.00534083520108,0.198956472041151,0.19496408711912,0.898819408654221,3.6743468478698,1.7922714592893,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.780534591431195,0,0.44292937929755,1.11618338060241,0.163863314715738,0.863424909329478,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,1.31976098378028,0,3.64170954232472,3.93020624054176,4.14931175462976,2.36241514304618,1.84461088766356,0.516856586336442,1.45413491791002,2.13898427030833,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,1.1659233465194,0,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,2.86401185404534,0,0.609958401380546,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.661227645802687,0.26175594198403,6.99920855775682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,3.47988086107804,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p2@Noxa1 | |||
}} |
Revision as of 23:24, 13 September 2013
Short description: | p2@Noxa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Noxa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1221 |
Association with transcript: | 0bp_to_ENSMUST00000114373_5end |
EntrezGene: | Noxa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.62e-19 | 9 |
epithelial cell of alimentary canal | 2.62e-19 | 9 |
brush border epithelial cell | 3.90e-11 | 6 |
gut absorptive cell | 3.90e-11 | 6 |
enterocyte | 3.90e-11 | 6 |
endo-epithelial cell | 4.75e-11 | 15 |
intestinal crypt stem cell | 4.16e-10 | 3 |
columnar/cuboidal epithelial cell | 1.67e-09 | 7 |
epithelial cell | 1.72e-09 | 25 |
endodermal cell | 5.90e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.76e-29 | 15 |
intestinal mucosa | 1.37e-24 | 13 |
wall of intestine | 1.37e-24 | 13 |
gastrointestinal system mucosa | 1.37e-24 | 13 |
intestine | 1.49e-22 | 31 |
epithelium of mucosa | 2.62e-19 | 9 |
gastrointestinal system epithelium | 2.62e-19 | 9 |
intestinal epithelium | 2.62e-19 | 9 |
gastrointestinal system | 1.35e-17 | 47 |
organ component layer | 2.99e-17 | 24 |
simple columnar epithelium | 1.48e-15 | 11 |
small intestine | 3.60e-11 | 4 |
pancreas | 1.51e-10 | 12 |
ileal mucosa | 4.34e-09 | 3 |
ileum | 4.34e-09 | 3 |
mucosa of small intestine | 4.34e-09 | 3 |
wall of small intestine | 4.34e-09 | 3 |
digestive system | 6.25e-07 | 116 |
digestive tract | 6.25e-07 | 116 |
primitive gut | 6.25e-07 | 116 |
colon | 6.69e-07 | 2 |
large intestine | 6.69e-07 | 2 |
endoderm-derived structure | 9.82e-07 | 118 |
endoderm | 9.82e-07 | 118 |
presumptive endoderm | 9.82e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.