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FFCP PHASE1:Mm9::chr2:44782726..44782759,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=227835|HGNC=|MCL_coexpression_id=1107|UniProt=Q8BW56|association_with_transcript=0bp_to_ENSMUST00000100127,ENSMUST00000143766,uc008jpb.1_5end|description=CAGE_peak_1_at_Gtdc1_5end|id=chr2:44782726..44782759,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.24e-11!94;UBERON:0007811!1.92e-08!86;UBERON:0003056!2.86e-08!49;UBERON:0001049!6.70e-08!52;UBERON:0005068!6.70e-08!52;UBERON:0006241!6.70e-08!52;UBERON:0007135!6.70e-08!52;UBERON:0003080!1.46e-07!40;UBERON:0000955!1.97e-07!50;UBERON:0006238!1.97e-07!50;UBERON:0000033!3.59e-07!63;UBERON:0002780!4.08e-07!39;UBERON:0001890!4.08e-07!39;UBERON:0006240!4.08e-07!39;UBERON:0002616!6.10e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.15e-08,49;UBERON:0001049,6.83e-08,52;UBERON:0005068,6.83e-08,52;UBERON:0006241,6.83e-08,52;UBERON:0007135,6.83e-08,52;UBERON:0002346,8.93e-08,64;UBERON:0003075,8.93e-08,64;UBERON:0007284,8.93e-08,64;UBERON:0000955,1.33e-07,47;UBERON:0006238,1.33e-07,47;UBERON:0003080,1.61e-07,40;UBERON:0000073,2.18e-07,54;UBERON:0002616,4.27e-07,46;UBERON:0002780,4.50e-07,39;UBERON:0001890,4.50e-07,39;UBERON:0006240,4.50e-07,39|phase1_expression=6.24580503708696,2.44282785347553,2.27499619694768,3.32710632437513,6.01074875935617,1.6787927191189,1.63528848416868,7.36002943616985,4.50523910885334,7.95819389494778,2.91070545983358,3.03134204182278,7.53283211697305,6.55653018142481,1.99865857089398,4.04950534779652,2.09868563438444,8.51747846467242,13.3001000597567,9.33657233955666,3.91199134694921,0.893618560807968,0.261199789138935,1.27993938234725,0.68822784320151,1.14846392823004,2.58457197695445,1.07735616342945,2.09025761402011,1.76421090831952,1.55211357458713,2.54012269383853,1.84519436275371,0,0.866554859253824,0.831173226792462,1.63335485009895,12.1374172913703,6.2506827561904,6.80580867165938,6.47054636834116,12.294818729252,11.6522484727477,1.00717454380462,0.608261587317087,2.0190142737785,0,0.65407546914134,0.878744730937887,0.388859798148567,0.979904951377538,1.43752564364972,11.0736519998106,11.6057942721815,7.39406358113421,0.514518872071894,2.29226751951005,1.03134418455488,4.45096213891115,3.70293685490423,4.43681982454325,1.0165335962074,1.77858959222228,0.449949858640699,0,1.4209602298922,1.49800055259202,1.15265491596466,10.6800300677732,8.23536223823313,10.5162480675691,3.99911378165325,4.8591079009355,7.59442955132715,6.80502844229478,0.919218786610021,3.30347642998166,6.00130489000382,5.9906547969935,3.95658863190582,4.48289453651807,4.68822033501084,2.23346399201105,8.4414391504752,6.72312290217964,7.66034322231536,6.40672563595963,8.20157561631323,0.832988126665025,1.36028808192214,4.34796733052517,0.860423876981386,4.0798280022465,1.61910957491345,1.94932925234301,1.34408066129201,1.82577746171277,1.36344258062446,0.779358013808606,0.35333957451034,2.53518155598025,2.56652954828636,5.09610479413291,0,1.08245520505607,1.01343946190039,1.01104889002957,3.19714863213368,20.9739685754209,2.67195850316685,4.16364784238726,1.52232739156071,3.92046345335299,2.11011696773672,6.23220147819235,1.0053327306374,4.94389935468748,2.89198713839823,7.96149496754887,5.82360659810673,3.75430581382669,3.87900202508178,3.72783522436244,10.2473278954042,5.44561437714983,2.55457055208591,1.7972268675888,1.19980546198682,2.54140454146129,11.2342979553617,9.60751265919116,7.16229807043327,18.0777292999968,18.1557974704535,6.85700547046548,10.2211995732687,6.51771928642024,4.97627882440372,6.82351447770922,4.41927897361595,5.07469727554544,4.36813998423599,5.04173963454978,4.67184935290717,8.91278138882395,7.81493693737584,6.74652416830048,9.31332134660456,4.95806383745537,8.50977360755187,11.2608719464927,8.54863356467542,7.50727572909114,8.358051996532,6.58502836505419,3.78165106955137,1.40442637462647,1.80143534980301,3.40996199274711,3.72826390563903,6.3322036194896,6.30217215113552,7.10234206755631,6.29645541591692,6.47921874126989,6.27841650826101,5.36546802799238,9.10769670463922,5.9241545968853,6.07419617092652,6.97191762094359,5.55559952216263,3.07370161407471,4.56301823785264,16.8231958851302,20.3751132510983,4.62586296177317,2.64450566663544,5.75878276445132,3.94802342162745,5.41243337552792,4.23535401709019,2.66853652613844,5.70676878337677,2.84717436926707,3.78807595865225,7.28872105520782,6.16765063327568,5.45899443933536,2.69645822596266,2.16138049874694,3.18626037206988,1.51734320762465,3.65595240351132,2.25415471346161,3.66572390121566,6.98228953803453,7.43439690837377,5.24863258131335,3.24742325555125,3.767969468193,4.31890073726302,2.37162101669719,4.67166296005063,5.11053387294328,3.14806957338795,4.26006254915856,4.58236603529592,5.0925170356284,4.89083433666378,3.72911021582581,3.56929837144506,5.75072826109418,7.44281895337007,4.99260276983297,3.53610429125956,2.15276896226295,2.8946611281802,3.69506380333209,3.7898282354097,4.88894929326078,3.73439188705414,5.16318546234705,4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|EntrezGene=227835
|HGNC=
|MCL_coexpression_id=1107
|UniProt=Q8BW56
|association_with_transcript=0bp_to_ENSMUST00000100127,ENSMUST00000143766,uc008jpb.1_5end
|description=CAGE_peak_1_at_Gtdc1_5end
|id=chr2:44782726..44782759,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!9.24e-11!94;UBERON:0007811!1.92e-08!86;UBERON:0003056!2.86e-08!49;UBERON:0001049!6.70e-08!52;UBERON:0005068!6.70e-08!52;UBERON:0006241!6.70e-08!52;UBERON:0007135!6.70e-08!52;UBERON:0003080!1.46e-07!40;UBERON:0000955!1.97e-07!50;UBERON:0006238!1.97e-07!50;UBERON:0000033!3.59e-07!63;UBERON:0002780!4.08e-07!39;UBERON:0001890!4.08e-07!39;UBERON:0006240!4.08e-07!39;UBERON:0002616!6.10e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.15e-08,49;UBERON:0001049,6.83e-08,52;UBERON:0005068,6.83e-08,52;UBERON:0006241,6.83e-08,52;UBERON:0007135,6.83e-08,52;UBERON:0002346,8.93e-08,64;UBERON:0003075,8.93e-08,64;UBERON:0007284,8.93e-08,64;UBERON:0000955,1.33e-07,47;UBERON:0006238,1.33e-07,47;UBERON:0003080,1.61e-07,40;UBERON:0000073,2.18e-07,54;UBERON:0002616,4.27e-07,46;UBERON:0002780,4.50e-07,39;UBERON:0001890,4.50e-07,39;UBERON:0006240,4.50e-07,39
|phase1_expression=6.24580503708696,2.44282785347553,2.27499619694768,3.32710632437513,6.01074875935617,1.6787927191189,1.63528848416868,7.36002943616985,4.50523910885334,7.95819389494778,2.91070545983358,3.03134204182278,7.53283211697305,6.55653018142481,1.99865857089398,4.04950534779652,2.09868563438444,8.51747846467242,13.3001000597567,9.33657233955666,3.91199134694921,0.893618560807968,0.261199789138935,1.27993938234725,0.68822784320151,1.14846392823004,2.58457197695445,1.07735616342945,2.09025761402011,1.76421090831952,1.55211357458713,2.54012269383853,1.84519436275371,0,0.866554859253824,0.831173226792462,1.63335485009895,12.1374172913703,6.2506827561904,6.80580867165938,6.47054636834116,12.294818729252,11.6522484727477,1.00717454380462,0.608261587317087,2.0190142737785,0,0.65407546914134,0.878744730937887,0.388859798148567,0.979904951377538,1.43752564364972,11.0736519998106,11.6057942721815,7.39406358113421,0.514518872071894,2.29226751951005,1.03134418455488,4.45096213891115,3.70293685490423,4.43681982454325,1.0165335962074,1.77858959222228,0.449949858640699,0,1.4209602298922,1.49800055259202,1.15265491596466,10.6800300677732,8.23536223823313,10.5162480675691,3.99911378165325,4.8591079009355,7.59442955132715,6.80502844229478,0.919218786610021,3.30347642998166,6.00130489000382,5.9906547969935,3.95658863190582,4.48289453651807,4.68822033501084,2.23346399201105,8.4414391504752,6.72312290217964,7.66034322231536,6.40672563595963,8.20157561631323,0.832988126665025,1.36028808192214,4.34796733052517,0.860423876981386,4.0798280022465,1.61910957491345,1.94932925234301,1.34408066129201,1.82577746171277,1.36344258062446,0.779358013808606,0.35333957451034,2.53518155598025,2.56652954828636,5.09610479413291,0,1.08245520505607,1.01343946190039,1.01104889002957,3.19714863213368,20.9739685754209,2.67195850316685,4.16364784238726,1.52232739156071,3.92046345335299,2.11011696773672,6.23220147819235,1.0053327306374,4.94389935468748,2.89198713839823,7.96149496754887,5.82360659810673,3.75430581382669,3.87900202508178,3.72783522436244,10.2473278954042,5.44561437714983,2.55457055208591,1.7972268675888,1.19980546198682,2.54140454146129,11.2342979553617,9.60751265919116,7.16229807043327,18.0777292999968,18.1557974704535,6.85700547046548,10.2211995732687,6.51771928642024,4.97627882440372,6.82351447770922,4.41927897361595,5.07469727554544,4.36813998423599,5.04173963454978,4.67184935290717,8.91278138882395,7.81493693737584,6.74652416830048,9.31332134660456,4.95806383745537,8.50977360755187,11.2608719464927,8.54863356467542,7.50727572909114,8.358051996532,6.58502836505419,3.78165106955137,1.40442637462647,1.80143534980301,3.40996199274711,3.72826390563903,6.3322036194896,6.30217215113552,7.10234206755631,6.29645541591692,6.47921874126989,6.27841650826101,5.36546802799238,9.10769670463922,5.9241545968853,6.07419617092652,6.97191762094359,5.55559952216263,3.07370161407471,4.56301823785264,16.8231958851302,20.3751132510983,4.62586296177317,2.64450566663544,5.75878276445132,3.94802342162745,5.41243337552792,4.23535401709019,2.66853652613844,5.70676878337677,2.84717436926707,3.78807595865225,7.28872105520782,6.16765063327568,5.45899443933536,2.69645822596266,2.16138049874694,3.18626037206988,1.51734320762465,3.65595240351132,2.25415471346161,3.66572390121566,6.98228953803453,7.43439690837377,5.24863258131335,3.24742325555125,3.767969468193,4.31890073726302,2.37162101669719,4.67166296005063,5.11053387294328,3.14806957338795,4.26006254915856,4.58236603529592,5.0925170356284,4.89083433666378,3.72911021582581,3.56929837144506,5.75072826109418,7.44281895337007,4.99260276983297,3.53610429125956,2.15276896226295,2.8946611281802,3.69506380333209,3.7898282354097,4.88894929326078,3.73439188705414,5.16318546234705,4.85768146581266,7.61739650835244,7.02481132288076,6.9359463406724,8.41565820665345,6.05928120898451,5.57135270033509,2.76295970985433,3.47157740595628,3.01582567878545,3.26343410291226,2.95058563811422,2.20749397043786,10.5963389391943,6.68106613575558,3.27869890753351,7.32165688892682,2.83957397474631,3.90438744296638,2.80050417052639,3.10659437338318,3.34198011123591,2.83076530788832,2.02405350837447,2.33804686329049,2.76701444562566,25.0630626809009,4.11626247103979,1.95872164033981,6.35259141478947,3.79431282836832,6.63725691699814,2.6705869977048,3.02323556964751,3.39489143560617,2.06711325016541,4.30409207121498,5.42699415653264,5.08947221268508,3.56497378384721,5.68866164284469,0,2.06271086496374,10.5536277783674,7.20244376125241,3.23396709456886,3.85806663056866,10.6404140185364,5.17269571046005,6.91105886528908,3.34911444026059,0.938686832254841,4.2366414172764,1.7642271844397,3.2977250588296,8.39615018818709,4.76472106932431,4.17803204010978,4.59594519286172,4.37221254944776,9.08583979851498,5.80960994712699,4.33412422722767,4.8150577116125,5.27431679613135,5.60446333656203,6.40578884978263,5.26933132980952,5.03825228365169,3.59319931891502,2.86401185404534,4.74503990371703,5.89626454667861,4.64422965533745,2.29997125615916,3.49380101993884,3.9110660451598,4.21532624199213,2.6175594198403,1.94422459937689,0.621339313086926,2.81846469342095,4.18646328923141,4.46737924234164,3.50012139019286,4.00395452780966,4.39285926276023,8.21500670520278,6.2498104725096,8.38874755405687,3.62376181239009,3.74439008135225,12.6404448251271,1.41907650703115,3.28675062927447,2.98817892848929,4.833720783022,5.36439657909415,7.57231331975804,7.08909730437971,8.88504759543699,9.60205763852998,11.393358920463,10.7203668813728,11.6416328384799,14.4927358705145,4.0811469050738,2.21985953374065,1.25599399253266,0.671538465456314,4.25017106870819,2.62755465631655,4.94509385521616,4.50173596066038,3.00943262421218,18.0720589637461,11.0478056761722,13.7494923225455,4.29632955859219,13.0165678756422,15.8632718451837,12.1504050041725,13.9599572999508,13.5942722695261,16.5683299760582,2.38710899443606,5.98537310101547,7.17081144167364,5.83456120963906,5.65955539095552,4.04455718590031,8.22312892865976,7.2112270033613,9.62757628775446,7.58091635291392,6.59046179714623,9.80856975207596,5.24392441831341,7.74704344098918,7.06456268154043,4.28664322154766,6.95305955669133,8.48800570040302,9.47797571847605,7.50714492685426,6.17164654293748,5.6792257970988,6.19934093863034,10.174249164263,9.2227192807024,6.09225176820071,6.58540702341981,9.47050961176234,6.24698923690964,9.53941861818155,8.54172130494054,7.09232273104057,3.27384834535751,7.12709469455443,8.68079749415136,6.49507502638659,7.01794825336225,10.3138105943183,8.22539827896026,8.38247392654159,7.65163857547391
|short_description=p1@Gtdc1
}}

Revision as of 00:02, 14 September 2013

Short description:p1@Gtdc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gtdc1_5end
Coexpression cluster:MCL_coexpression_mm9:1107
Association with transcript: 0bp_to_ENSMUST00000100127, ENSMUST00000143766, uc008jpb.1_5end
EntrezGene:Gtdc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gtdc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.30
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.07
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.20
accessory axillary lymph node, adult.CNhs10475.1063-29H920.97
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A411.23
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D518.08
cortex, neonate N30.CNhs11107.1392-42F218.16
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B210.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C65.07
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C68.91
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G86.75
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H28.51
forelimb, embryo E13.CNhs10589.384-1E211.26
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I96.30
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C66.48
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E39.11
heart, neonate N03.CNhs11221.1349-25I25.92
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G16.97
heart, neonate N20.CNhs11127.821-26I65.56
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D24.56
hippocampus, adult.CNhs10478.13-16E816.82
hippocampus, neonate N00.CNhs11228.627-43G120.38
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D85.41
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G77.43
kidney, neonate N10.CNhs11206.758-6D55.25
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A45.57
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C210.60
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I925.06
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B910.64
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H34.76
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H15.60
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D44.64
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B83.91
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G54.39
testis, neonate N00.CNhs11189.1300-22B78.22
testis, neonate N07.CNhs11222.726-26I46.25
testis, neonate N10.CNhs11204.763-44D98.39
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F87.57
thymus, neonate N03.CNhs11137.2104-43C77.09
thymus, neonate N06.CNhs11197.681-26C48.89
thymus, neonate N07.CNhs11211.713-19D39.60
thymus, neonate N10.CNhs11194.748-24E411.39
thymus, neonate N20.CNhs11186.820-7A210.72
thymus, neonate N25.CNhs11125.1362-25G711.64
thymus, neonate N30.CNhs11132.1393-42G214.49
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C210.31
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate3.15e-0849
neural tube6.83e-0852
neural rod6.83e-0852
future spinal cord6.83e-0852
neural keel6.83e-0852
neurectoderm8.93e-0864
neural plate8.93e-0864
presumptive neural plate8.93e-0864
brain1.33e-0747
future brain1.33e-0747
anterior neural tube1.61e-0740
regional part of nervous system2.18e-0754
regional part of brain4.27e-0746
regional part of forebrain4.50e-0739
forebrain4.50e-0739
future forebrain4.50e-0739







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