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FFCP PHASE1:Mm9::chr2:72817045..72817123,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20687|HGNC=|MCL_coexpression_id=1162|UniProt=F7AE15|association_with_transcript=0bp_to_ENSMUST00000100018_5end|description=CAGE_peak_1_at_Sp3_5end|id=chr2:72817045..72817123,-|ontology_enrichment_celltype=CL:0000838!5.01e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,5.01e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.15e-18!130;UBERON:0000925!3.15e-18!130;UBERON:0006595!3.15e-18!130;UBERON:0001007!3.68e-17!128;UBERON:0001555!3.68e-17!128;UBERON:0007026!3.68e-17!128;UBERON:0004921!1.20e-16!126;UBERON:0004185!1.20e-16!126;UBERON:0000490!1.83e-12!66;UBERON:0005057!3.75e-12!51;UBERON:0002405!3.82e-12!70;UBERON:0005911!8.73e-12!69;UBERON:0000077!4.67e-11!97;UBERON:0003929!1.40e-10!55;UBERON:0001041!2.43e-10!92;UBERON:0003104!6.40e-10!131;UBERON:0009142!6.40e-10!131;UBERON:0000926!6.68e-09!193;UBERON:0004120!6.68e-09!193;UBERON:0006603!6.68e-09!193;UBERON:0003081!4.05e-08!88;UBERON:0004177!1.11e-07!29;UBERON:0002193!1.65e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.23e-20,118;UBERON:0000925,9.23e-20,118;UBERON:0006595,9.23e-20,118;UBERON:0001007,1.19e-18,116;UBERON:0001555,1.19e-18,116;UBERON:0007026,1.19e-18,116;UBERON:0004921,3.89e-18,114;UBERON:0000490,1.83e-12,66;UBERON:0001041,8.15e-12,80;UBERON:0005911,8.73e-12,69;UBERON:0003929,1.40e-10,55;UBERON:0000077,2.58e-08,35;UBERON:0005409,6.90e-08,47;UBERON:0003081,1.06e-07,87;UBERON:0004177,1.11e-07,29;UBERON:0005057,1.11e-07,29;UBERON:0002193,1.65e-07,48;UBERON:0002405,1.65e-07,48|phase1_expression=17.9366708757369,63.1645487827244,48.6849186146804,91.0417276033558,81.1451082513082,34.0794921981136,24.2957146219347,132.351406527616,84.0508671245451,100.179617265813,38.6952608189641,37.6524590457988,122.579722630743,120.29047372854,71.2854890285518,63.5772339604053,65.7588165440458,85.1747846467242,93.5120437191138,64.0828374215026,15.9881385484011,54.3121503068843,46.4935624667305,37.9182042020374,39.9172149056876,32.7312219545562,26.2764817657036,33.1825698336269,58.5272131925632,50.910086211506,23.0599731081517,15.2407361630311,6.76571266343027,15.8481681015439,24.5523876788583,25.9326046759248,26.9503550266327,191.687486877504,127.357661157379,176.42750171917,236.469058188468,192.618826758282,230.131907336767,37.6431485746976,34.2654027521959,31.9371348761326,11.7358701652206,4.57852828398938,1.97717564461025,9.52706505463989,11.6188729949051,1.43752564364972,85.7369116955033,162.481119810541,125.699080879282,46.3066984864705,62.7508233465877,53.629897596854,1.82084814773638,3.1739458756322,3.1691570175309,11.8595586224196,15.1180115338894,6.74924787961049,9.88866362566974,8.5257613793532,8.08920298399693,7.68436610643109,5.49554945234932,3.64516033495565,4.41682418837902,5.99867067247988,6.62605622854841,7.7169203505421,5.65488279007595,7.35375029288017,9.91042928994498,9.70423769447427,7.83393319606842,2.50583946687368,2.8361169516747,2.6045668527838,5.02529398202486,5.06486349028512,9.0150966188318,9.72274332063103,7.83044244395066,4.47358669980721,16.5840363399673,17.4570303846675,38.8418414860248,21.5105969245347,45.5580793584193,41.0174425644741,36.3874793770695,44.8026887097336,33.1448831510934,25.5645483867087,19.2241643406123,15.9002808529653,10.4224130634744,20.5322363862909,17.8363667794652,14.2213340630666,15.8038459938186,14.9482320630308,15.6712577954583,39.8501740219519,118.334612826757,31.0244070645484,22.2061218260654,21.0081180035377,17.7573932887165,18.6896074285252,26.5750478126693,26.3899841792318,55.3716727724997,55.3815537003262,77.8457285715889,27.1768307911647,39.3097902859501,49.9421510729279,100.651551057786,11.4184510834503,8.16842156572475,61.3096932500619,36.9030583478234,26.3957201637099,46.6347733358147,9.43681028250383,16.0125210986519,6.03140890141749,6.95297280769106,5.11430914660661,9.97382613885888,9.24775199486219,25.4598409625791,43.2936257723124,21.4814344668623,34.0915806536088,16.5252962562634,14.2539304748753,20.1669585381991,21.8521985861787,17.8935992767992,22.163673609279,21.082888025939,25.0942269616845,12.5029435901048,25.3402147424878,29.7357399837074,34.1945342587017,40.3168511377117,39.700746983527,37.6581309626537,27.4667288209521,39.3239384895411,40.4036214170103,36.941254921427,18.0199422105887,18.5275587385066,16.3856475929524,22.9642393517654,25.5793501271625,23.2943340459941,33.0198201545579,30.8514411609562,26.856028744449,31.1018116336478,30.2068133905535,31.5357669133379,27.7779976108131,32.7129671783665,25.0966003081895,8.20130799400096,7.30622747892919,109.038198384653,72.9883563991382,14.9301775374664,22.9914305141834,27.8353716455722,35.0929332844616,34.9133528836446,37.6646739702867,56.9434873853414,47.1039010510671,43.2296559136464,52.3255521468227,56.3446211774257,52.1315257019448,56.6281690671699,56.954404150749,4.74169752382704,21.7072173958485,32.6852433451933,23.4199027022111,18.6194387680921,21.3914250665472,22.5122072162356,26.8650469322876,23.5498091762062,35.291588881635,34.38850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|EntrezGene=20687
|HGNC=
|MCL_coexpression_id=1162
|UniProt=F7AE15
|association_with_transcript=0bp_to_ENSMUST00000100018_5end
|description=CAGE_peak_1_at_Sp3_5end
|id=chr2:72817045..72817123,-
|ontology_enrichment_celltype=CL:0000838!5.01e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000838,5.01e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.15e-18!130;UBERON:0000925!3.15e-18!130;UBERON:0006595!3.15e-18!130;UBERON:0001007!3.68e-17!128;UBERON:0001555!3.68e-17!128;UBERON:0007026!3.68e-17!128;UBERON:0004921!1.20e-16!126;UBERON:0004185!1.20e-16!126;UBERON:0000490!1.83e-12!66;UBERON:0005057!3.75e-12!51;UBERON:0002405!3.82e-12!70;UBERON:0005911!8.73e-12!69;UBERON:0000077!4.67e-11!97;UBERON:0003929!1.40e-10!55;UBERON:0001041!2.43e-10!92;UBERON:0003104!6.40e-10!131;UBERON:0009142!6.40e-10!131;UBERON:0000926!6.68e-09!193;UBERON:0004120!6.68e-09!193;UBERON:0006603!6.68e-09!193;UBERON:0003081!4.05e-08!88;UBERON:0004177!1.11e-07!29;UBERON:0002193!1.65e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.23e-20,118;UBERON:0000925,9.23e-20,118;UBERON:0006595,9.23e-20,118;UBERON:0001007,1.19e-18,116;UBERON:0001555,1.19e-18,116;UBERON:0007026,1.19e-18,116;UBERON:0004921,3.89e-18,114;UBERON:0000490,1.83e-12,66;UBERON:0001041,8.15e-12,80;UBERON:0005911,8.73e-12,69;UBERON:0003929,1.40e-10,55;UBERON:0000077,2.58e-08,35;UBERON:0005409,6.90e-08,47;UBERON:0003081,1.06e-07,87;UBERON:0004177,1.11e-07,29;UBERON:0005057,1.11e-07,29;UBERON:0002193,1.65e-07,48;UBERON:0002405,1.65e-07,48
|phase1_expression=17.9366708757369,63.1645487827244,48.6849186146804,91.0417276033558,81.1451082513082,34.0794921981136,24.2957146219347,132.351406527616,84.0508671245451,100.179617265813,38.6952608189641,37.6524590457988,122.579722630743,120.29047372854,71.2854890285518,63.5772339604053,65.7588165440458,85.1747846467242,93.5120437191138,64.0828374215026,15.9881385484011,54.3121503068843,46.4935624667305,37.9182042020374,39.9172149056876,32.7312219545562,26.2764817657036,33.1825698336269,58.5272131925632,50.910086211506,23.0599731081517,15.2407361630311,6.76571266343027,15.8481681015439,24.5523876788583,25.9326046759248,26.9503550266327,191.687486877504,127.357661157379,176.42750171917,236.469058188468,192.618826758282,230.131907336767,37.6431485746976,34.2654027521959,31.9371348761326,11.7358701652206,4.57852828398938,1.97717564461025,9.52706505463989,11.6188729949051,1.43752564364972,85.7369116955033,162.481119810541,125.699080879282,46.3066984864705,62.7508233465877,53.629897596854,1.82084814773638,3.1739458756322,3.1691570175309,11.8595586224196,15.1180115338894,6.74924787961049,9.88866362566974,8.5257613793532,8.08920298399693,7.68436610643109,5.49554945234932,3.64516033495565,4.41682418837902,5.99867067247988,6.62605622854841,7.7169203505421,5.65488279007595,7.35375029288017,9.91042928994498,9.70423769447427,7.83393319606842,2.50583946687368,2.8361169516747,2.6045668527838,5.02529398202486,5.06486349028512,9.0150966188318,9.72274332063103,7.83044244395066,4.47358669980721,16.5840363399673,17.4570303846675,38.8418414860248,21.5105969245347,45.5580793584193,41.0174425644741,36.3874793770695,44.8026887097336,33.1448831510934,25.5645483867087,19.2241643406123,15.9002808529653,10.4224130634744,20.5322363862909,17.8363667794652,14.2213340630666,15.8038459938186,14.9482320630308,15.6712577954583,39.8501740219519,118.334612826757,31.0244070645484,22.2061218260654,21.0081180035377,17.7573932887165,18.6896074285252,26.5750478126693,26.3899841792318,55.3716727724997,55.3815537003262,77.8457285715889,27.1768307911647,39.3097902859501,49.9421510729279,100.651551057786,11.4184510834503,8.16842156572475,61.3096932500619,36.9030583478234,26.3957201637099,46.6347733358147,9.43681028250383,16.0125210986519,6.03140890141749,6.95297280769106,5.11430914660661,9.97382613885888,9.24775199486219,25.4598409625791,43.2936257723124,21.4814344668623,34.0915806536088,16.5252962562634,14.2539304748753,20.1669585381991,21.8521985861787,17.8935992767992,22.163673609279,21.082888025939,25.0942269616845,12.5029435901048,25.3402147424878,29.7357399837074,34.1945342587017,40.3168511377117,39.700746983527,37.6581309626537,27.4667288209521,39.3239384895411,40.4036214170103,36.941254921427,18.0199422105887,18.5275587385066,16.3856475929524,22.9642393517654,25.5793501271625,23.2943340459941,33.0198201545579,30.8514411609562,26.856028744449,31.1018116336478,30.2068133905535,31.5357669133379,27.7779976108131,32.7129671783665,25.0966003081895,8.20130799400096,7.30622747892919,109.038198384653,72.9883563991382,14.9301775374664,22.9914305141834,27.8353716455722,35.0929332844616,34.9133528836446,37.6646739702867,56.9434873853414,47.1039010510671,43.2296559136464,52.3255521468227,56.3446211774257,52.1315257019448,56.6281690671699,56.954404150749,4.74169752382704,21.7072173958485,32.6852433451933,23.4199027022111,18.6194387680921,21.3914250665472,22.5122072162356,26.8650469322876,23.5498091762062,35.291588881635,34.3885047421093,36.7059232575407,38.1324450519614,43.6232498026616,57.0036941101693,56.676632541818,45.5780274688741,60.9915811395718,36.642561251158,47.22456306835,57.5072826109418,53.5882964642645,41.188972851122,39.1497260818023,37.4940594260796,38.5954817090694,46.9273103023176,19.138632588819,27.3781160422603,27.8381940671309,37.0810592295833,42.714095647663,58.7967792988454,35.7094575579772,46.3447323672202,30.7835918611797,33.4855014180723,41.9490085672289,35.4004212825086,34.8604231181443,10.5553898757491,27.7391898747542,29.0140921081231,26.7658643915591,9.79358598925531,8.32202974804643,24.4263068611246,17.9254358315105,23.0321000173867,23.0358859135017,16.1567548299599,25.091723785018,16.0415045339324,18.6830510320629,24.6934528021686,24.2572362066389,18.9738133414331,12.8528526568723,31.6526390014439,17.450429159391,23.1299482282078,28.7048013972212,35.84118735179,19.4224508923985,15.7208249621671,26.5933162455816,16.2416041084425,33.2029959779442,29.4608254211772,27.2650297108129,26.3808060004694,32.8678228253249,33.7339547439996,27.8465966770104,21.1072555567349,20.1668425315067,7.24408629183425,21.005029433096,23.4089108407801,24.0797903762795,18.7585883486418,9.43841342255258,61.7186592207558,102.738554368953,30.8739757276947,28.0306630000516,39.5587845404969,33.2324216354139,29.1268519367653,22.4873032650734,52.4665505933731,10.9400928186201,70.5696737695132,34.2602200818949,47.4097990066462,64.2336438385996,69.1672792268387,56.9657651284241,45.3842408083594,52.2018917167244,51.6867902028545,43.9148484286952,16.449471666219,27.0414891278709,28.7294206585991,32.4086858822427,35.1563727631346,31.558257054048,34.3011841260144,35.07529622586,55.6048235421791,34.7950015328678,7.89170114157866,21.081832992201,20.5168528166801,28.9732270632631,22.6029691086029,29.736278086377,26.2880214566489,17.0567744145575,13.7365741197681,11.1128695579963,8.64090018773596,104.915692048555,18.4479945914049,23.7262311050751,39.3660093622719,54.2450887872469,61.9885826917546,52.0446296421465,58.4850527611326,57.7528093703404,51.5920081054349,62.1089300442938,85.0807298858039,68.4066194062742,72.8143100591175,30.1551410208231,73.4773505668154,37.5003920627608,61.949423438345,27.6261119466032,45.9822064855396,28.5716533856934,29.154099554753,35.6116193865108,8.471277639256,7.36520378411483,6.87474616127276,6.70227411140382,8.90607275701835,7.55393897389701,4.72515750162264,9.00642406448441,7.25027854374727,8.80192529978094,17.4362743941417,20.7492934168536,18.9514302387089,39.6263948821319,31.0227480689414,33.8272055548026,31.5590353478294,29.4630131851619,34.3383554263242,26.7859044469625,35.7405812845238,28.1053248665254,26.5941881214466,25.3539603523282,22.9167521132897,29.0539151682675,28.1598912045999,28.3576554081646,23.4888963457885,32.5309613497018,33.2583174813853,31.0582660778841,28.1354704137839,32.1215580757446,30.7737673958131,26.5689868779864,29.8172595782619,27.6223197009735,28.7904721353227,29.1793981262024,29.4214844947952,24.3306071467642,30.6923282377267,24.0152103838247,31.0579643679638,19.4852250791598,32.9843567908026,29.6522054586652,31.753863123428,34.8534442208834,42.1999460829167
|short_description=p1@Sp3
}}

Revision as of 00:29, 14 September 2013

Short description:p1@Sp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sp3_5end
Coexpression cluster:MCL_coexpression_mm9:1162
Association with transcript: 0bp_to_ENSMUST00000100018_5end
EntrezGene:Sp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I563.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I648.68
CD326+ enterocyte, pool1.CNhs13542.11848-124I391.04
CD326+ enterocyte, pool2.CNhs13197.11849-124I481.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.30
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9132.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E784.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2100.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E638.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F137.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4122.58
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8120.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A171.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A363.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A565.76
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A285.17
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A493.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A664.08
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H254.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I946.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D137.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D239.92
GP2+ M cell, pool1.CNhs13228.11845-124H932.73
GP2+ M cell, pool2.CNhs13231.11846-124I126.28
GP2+ M cell, pool3.CNhs13240.11847-124I233.18
Ileum epithelium, pool1.CNhs13199.10252-104B958.53
Ileum epithelium, pool2.CNhs13232.10253-104C150.91
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F524.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F625.93
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8191.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1127.36
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3176.43
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9236.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2192.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4230.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D837.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D934.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B331.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A285.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9162.48
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1125.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C146.31
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E162.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C553.63
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.86
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D916.58
Mouse Schwann, donor2.CNhs12573.11746-123F917.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C445.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C841.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F436.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F644.80
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A733.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.90
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B639.85
accessory axillary lymph node, adult.CNhs10475.1063-29H9118.33
adrenal gland, adult.CNhs10508.49-24D731.02
adrenal gland, embryo E14.CNhs11038.406-44C522.21
adrenal gland, embryo E16.CNhs11004.1254-43D621.01
adrenal gland, embryo E17.CNhs11043.1263-45I117.76
adrenal gland, embryo E18.CNhs11026.1262-18F518.69
adrenal gland, neonate N00.CNhs11191.1311-23C126.58
adrenal gland, neonate N25.CNhs11223.1377-27I326.39
amnion, adult pregnant day17.5.CNhs10488.583-22A855.37
aorta, adult.CNhs10498.46-23H155.38
bone (os femoris), adult.CNhs10483.56-12G277.85
bone (os femoris), neonate N02.CNhs11227.1985-43F527.18
bone (os femoris), neonate N16.CNhs11225.1525-43A639.31
bone (os femoris), neonate N20.CNhs11195.1350-25C349.94
cecum, adult.CNhs10467.37-13H4100.65
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H761.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C736.90
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D126.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D446.63
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A243.29
epididymis, adult.CNhs10490.58-23B221.48
eyeball, adult.CNhs10484.31-12G434.09
eyeball, embryo E12.CNhs11016.345-16C616.53
eyeball, embryo E14.CNhs10521.399-16E214.25
eyeball, embryo E15.CNhs10593.426-16C920.17
eyeball, embryo E17.CNhs11023.1261-18D421.85
eyeball, neonate N00.CNhs11207.633-15C617.89
eyeball, neonate N01.CNhs11140.1532-43E722.16
eyeball, neonate N02.CNhs11205.1551-44G821.08
eyeball, neonate N16.CNhs11188.777-19A225.09
forelimb, embryo E11.CNhs10596.335-25E212.50
forelimb, embryo E12.CNhs10600.359-14H225.34
forelimb, embryo E13.CNhs10589.384-1E229.74
forelimb, embryo E14.CNhs10577.413-26A834.19
forelimb, embryo E15.CNhs11007.437-20E740.32
forelimb, embryo E17.CNhs10598.1517-43C439.70
forelimb, embryo E18.CNhs11008.1520-43B537.66
gonad, embryo E13.CNhs11044.1564-45I627.47
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C839.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D240.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D536.94
heart, embryo E11.CNhs10586.331-24E918.02
heart, embryo E12.CNhs11015.353-12F518.53
heart, embryo E13.CNhs11013.376-3I916.39
heart, embryo E14.CNhs10597.403-26D422.96
heart, embryo E15.CNhs11017.431-16C825.58
heart, embryo E16.CNhs11021.457-17C623.29
heart, embryo E17.CNhs11025.479-18E533.02
heart, embryo E18.CNhs11030.1283-20G330.85
heart, neonate N00.CNhs11213.639-21E326.86
heart, neonate N03.CNhs11221.1349-25I231.10
heart, neonate N10.CNhs11118.749-24G130.21
heart, neonate N16.CNhs11209.782-15G131.54
heart, neonate N20.CNhs11127.821-26I627.78
heart, neonate N25.CNhs11196.1351-25D332.71
heart, neonate N30.CNhs11202.1390-42D225.10
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G17.31
intestinal mucosa, adult.CNhs10506.860-29I3109.04
intestine, adult.CNhs10496.178-9A372.99
intestine, embryo E12.CNhs11019.1251-16I514.93
intestine, embryo E13.CNhs11010.381-16D522.99
intestine, embryo E15.CNhs10602.976-16D827.84
intestine, embryo E16.CNhs10585.463-22H435.09
intestine, embryo E17.CNhs10582.482-18D334.91
intestine, embryo E18.CNhs10526.1289-20F737.66
intestine, neonate N00.CNhs11126.644-26D156.94
intestine, neonate N01.CNhs11192.1322-23E947.10
intestine, neonate N06.CNhs11102.688-20B843.23
intestine, neonate N07.CNhs11095.720-20F252.33
intestine, neonate N10.CNhs11098.755-23A556.34
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E356.63
intestine, neonate N30.CNhs11131.1384-42G156.95
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F821.71
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I223.42
kidney, embryo E18.CNhs11001.1288-20C718.62
kidney, neonate N00.CNhs11214.646-21G721.39
kidney, neonate N10.CNhs11206.758-6D522.51
kidney, neonate N20.CNhs11113.832-19I126.87
kidney, neonate N25.CNhs11122.1353-25F323.55
kidney, neonate N30.CNhs11203.1385-42H135.29
liver, adult pregnant day01.CNhs10466.508-5B234.39
liver, embryo E12.CNhs10601.355-15F836.71
liver, embryo E13.CNhs10524.378-3H638.13
liver, embryo E14.CNhs10594.409-16E143.62
liver, embryo E15.CNhs10520.433-16D757.00
liver, embryo E16.CNhs10523.462-17F556.68
liver, embryo E17.CNhs10510.481-18A345.58
liver, embryo E18.CNhs10579.499-43G460.99
liver, neonate N00.CNhs11117.641-24F436.64
liver, neonate N03.CNhs11123.1345-25G247.22
liver, neonate N06.CNhs11101.684-20A857.51
liver, neonate N07.CNhs11103.716-20H253.59
liver, neonate N10.CNhs11115.751-24B941.19
liver, neonate N20.CNhs11220.823-25A339.15
liver, neonate N25.CNhs11198.1368-26H137.49
liver, neonate N30.CNhs11106.1382-42D138.60
lung, adult.CNhs10474.28-22B146.93
lung, embryo E12.CNhs10522.354-16G219.14
lung, embryo E14.CNhs10604.404-26F827.38
lung, embryo E15.CNhs11020.432-17C527.84
lung, embryo E16.CNhs10998.458-17B637.08
lung, embryo E17.CNhs10605.480-44A642.71
lung, embryo E18.CNhs10583.1287-20I658.80
lung, neonate N00.CNhs11224.640-42C635.71
lung, neonate N06.CNhs11212.683-20E546.34
lung, neonate N07.CNhs11111.715-19A330.78
lung, neonate N10.CNhs11219.750-23E633.49
lung, neonate N20.CNhs11109.822-18A441.95
lung, neonate N25.CNhs11119.1359-25C735.40
lung, neonate N30.CNhs11133.1394-42H234.86
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A127.74
mammary gland, adult lactating day02.CNhs10480.595-22B629.01
mammary gland, adult pregnant day19.CNhs10476.588-5H226.77
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C217.93
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E223.04
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.09
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.97
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I731.65
ovary, embryo E18.CNhs11040.505-44H717.45
ovary, neonate N00.CNhs11217.1299-22I423.13
oviduct, adult pregnant day01.CNhs10500.988-6G628.70
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F419.42
pancreas, embryo E15.CNhs11042.1556-45F215.72
pancreas, embryo E16.CNhs11003.460-26E526.59
pancreas, embryo E17.CNhs10599.1558-45G316.24
pancreas, embryo E18.CNhs10580.1535-43I733.20
pancreas, neonate N00.CNhs11105.645-26G929.46
pancreas, neonate N01.CNhs11138.1531-43D727.27
pancreas, neonate N02.CNhs11139.1539-43D826.38
pancreas, neonate N16.CNhs11136.787-43B632.87
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G821.11
pituitary gland, embryo E12.CNhs11018.346-16E620.17
pituitary gland, embryo E13.CNhs11009.370-44C77.24
pituitary gland, embryo E14.CNhs11037.398-44A521.01
pituitary gland, embryo E15.CNhs10592.427-16B923.41
pituitary gland, embryo E16.CNhs11036.449-43F624.08
pituitary gland, embryo E17.CNhs11039.1265-44F518.76
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I761.72
placenta, adult pregnant day17.CNhs10464.577-18G3102.74
prostate, adult.CNhs10470.859-1F830.87
skin, adult.CNhs10492.30-1C328.03
skin, neonate N00.CNhs11124.650-25G439.56
skin, neonate N03.CNhs11215.662-22H333.23
skin, neonate N06.CNhs11097.693-20I529.13
skin, neonate N10.CNhs11108.762-6C422.49
small intestine, neonate N16.CNhs11114.790-21I152.47
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G270.57
spleen, embryo E16.CNhs11035.461-43C134.26
spleen, embryo E18.CNhs11011.1271-21F247.41
spleen, neonate N10.CNhs11116.752-24D164.23
spleen, neonate N20.CNhs11112.824-19H169.17
spleen, neonate N25.CNhs11099.1354-25G356.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C645.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C952.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D351.69
stomach, adult.CNhs10503.33-1H643.91
stomach, embryo E12.CNhs10588.356-43E316.45
stomach, embryo E15.CNhs10603.1252-16G827.04
stomach, embryo E16.CNhs11022.459-17D428.73
stomach, embryo E17.CNhs11006.1035-18D532.41
stomach, embryo E18.CNhs10999.1286-20C635.16
stomach, neonate N03.CNhs11193.1340-24B831.56
stomach, neonate N07.CNhs11210.718-18A934.30
stomach, neonate N25.CNhs11104.1355-25E435.08
stomach, neonate N30.CNhs11134.1386-42I155.60
submandibular gland, adult.CNhs10469.59-29C134.80
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F521.08
testis, embryo E15.CNhs11034.443-27C520.52
testis, embryo E16.CNhs11033.470-26G528.97
testis, embryo E17.CNhs11029.486-18I522.60
testis, embryo E18.CNhs11027.503-18G529.74
testis, neonate N00.CNhs11189.1300-22B726.29
testis, neonate N07.CNhs11222.726-26I417.06
testis, neonate N10.CNhs11204.763-44D913.74
testis, neonate N20.CNhs11110.839-18H311.11
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B5104.92
thymus, embryo E14.CNhs11041.402-44I418.45
thymus, embryo E15.CNhs11005.430-45I223.73
thymus, embryo E16.CNhs11002.456-26C539.37
thymus, embryo E17.CNhs10581.478-18C154.25
thymus, embryo E18.CNhs10595.1273-19G461.99
thymus, neonate N02.CNhs11181.1541-43F852.04
thymus, neonate N03.CNhs11137.2104-43C758.49
thymus, neonate N06.CNhs11197.681-26C457.75
thymus, neonate N07.CNhs11211.713-19D351.59
thymus, neonate N10.CNhs11194.748-24E462.11
thymus, neonate N20.CNhs11186.820-7A285.08
thymus, neonate N25.CNhs11125.1362-25G768.41
thymus, neonate N30.CNhs11132.1393-42G272.81
tongue, adult.CNhs10499.32-1B430.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H373.48
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F737.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G561.95
urinary bladder, adult.CNhs10481.879-12E427.63
uterus, adult pregnant day19.CNhs10497.590-15F545.98
uterus, adult.CNhs10509.92-27E528.57
vagina, adult.CNhs10502.89-27D529.15
vesicular gland, adult.CNhs10491.51-27F835.61
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I817.44
whole body, embryo E12.CNhs10587.857-27C920.75
whole body, embryo E13.CNhs10512.372-23H218.95
whole body, embryo E14.5.CNhs10578.420-27D239.63
whole body, embryo E14.CNhs10519.395-14B131.02
whole body, embryo E16.CNhs10514.453-14F233.83
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G535.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G528.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G533.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G528.14
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.12
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.77
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.57
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G529.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G530.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.02
whole body, embryo E17.5.CNhs10513.490-9F931.06
whole body, embryo E17.CNhs10517.475-3I519.49
whole body, embryo E18.CNhs10516.493-3B332.98
whole body, neonate N00.CNhs10525.657-19C229.65
whole body, neonate N01.CNhs10576.659-23C631.75
whole body, neonate N06.CNhs10515.692-21D134.85
whole body, neonate N10.CNhs10518.761-6B442.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell5.01e-0712

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.23e-20118
endoderm9.23e-20118
presumptive endoderm9.23e-20118
digestive system1.19e-18116
digestive tract1.19e-18116
primitive gut1.19e-18116
subdivision of digestive tract3.89e-18114
unilaminar epithelium1.83e-1266
foregut8.15e-1280
endo-epithelium8.73e-1269
gut epithelium1.40e-1055
mixed endoderm/mesoderm-derived structure2.58e-0835
gastrointestinal system6.90e-0847
lateral plate mesoderm1.06e-0787
hemopoietic organ1.11e-0729
immune organ1.11e-0729
hemolymphoid system1.65e-0748
immune system1.65e-0748







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