FFCP PHASE1:Mm9::chr3:129763591..129763651,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=99683|HGNC=|UniProt=Q80ZX0,Q3U882|association_with_transcript=173bp_to_ENSMUST00000001079,ENSMUST00000098616,NM_207209,uc008rit.1_5end|description=CAGE_peak_1_at_Sec24b_5end|id=chr3:129763591..129763651,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!7.55e-09!41;UBERON:0001004!1.89e-08!42|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.55e-09,41;UBERON:0001004,1.89e-08,42;UBERON:0005157,9.75e-07,20|phase1_expression=12.9720566154883,24.4282785347553,22.7499619694768,20.2651021575576,20.5367249278002,19.809754085603,18.4553986070465,28.019761186822,66.311488133435,67.1765190544121,22.9432077422177,27.4416226943957,29.4465255481674,30.8594020539061,14.3237197580735,10.3262386368811,4.19737126876888,26.498821890092,26.8744289867248,21.6438722416995,44.3075541687074,17.7730802649585,11.4927907221132,12.9593862462659,12.3881011776272,22.9692785646008,15.9381938578858,17.2376986148711,11.9714754257516,17.1380488236753,13.5255611499736,12.065582795733,11.0711661765223,15.8481681015439,15.0202842270663,10.140313366868,11.8418226632174,33.9010620896895,25.0027310247616,17.2762835511353,26.4704169613956,30.0540013381716,27.1885797697446,19.5140067862145,17.8423398946346,18.9053154726532,33.6428278069657,21.8025156380447,27.460772841809,25.8591765768797,28.6972164331993,21.5628846547457,26.1740865450069,33.3666585325218,36.2981303073861,49.3938117189018,39.5416147115484,36.097046459421,32.7752666592548,25.9205579843296,29.1562445612842,29.1406297579454,26.6788438833342,37.7957881258188,37.576921777545,29.8401648277362,25.4660093940644,32.2743376470106,25.9224030771194,22.680997639724,26.2906201689228,25.9942395807461,22.5285911770646,20.0884910712525,21.5652309791032,34.9303138911808,33.0347642998166,34.7309559591711,33.3326177166048,29.0149833006426,30.8313358940121,28.129322010065,23.1721889171146,25.3243174514256,34.3796057497823,32.9984015730508,32.1759998605973,34.11109858603,22.8693103866216,38.3147809741403,41.7404863730416,17.2084775396277,26.5188820146023,17.810205324048,14.2950811838487,14.7848872742121,21.487996280158,17.0430322578058,13.5088722393492,9.54016851177919,16.1969932743183,11.5493829672886,22.9324715735981,42.6640021891999,21.6491041011214,22.0423082963336,20.2209778005913,21.6949371466214,141.121146587709,36.9620926271414,23.0735484598961,22.8349108734106,22.3697032338377,24.2663451289722,37.1580314548827,28.1493164578473,45.7310690308592,83.2892295858691,28.307537662396,30.8974683399552,25.838457659866,19.3950101254089,18.6391761218122,34.255353250351,34.7681533310335,27.0784478521107,21.4469072865597,8.99854096490112,17.0274104277907,35.3505908995382,29.7375391832107,20.2303506901712,30.5930803538407,26.5944075623544,27.6358099264215,25.1473957755024,29.0242186973401,28.9868241521517,22.9977710174644,29.2514179682199,19.9084277732937,15.8632452059096,23.2280147448901,24.866294942893,34.8346875654799,27.6725635815276,28.5790259907173,31.3031078594209,25.2214551731425,33.0935640293684,29.2078866112155,22.3579647076126,35.0339534024253,36.9147296513497,31.6904490068233,24.2821805518562,5.61770549850588,7.72043721344146,16.4814829649444,29.6189854725768,26.5014447778639,23.948254174315,38.5893919003893,31.0887486160898,29.3107514486019,28.8342091490506,29.5100741539581,30.0086929883626,25.342216886676,30.6993157827908,35.6702762001765,25.1463978371572,29.6392655642918,26.0360452395121,27.7582732104648,20.5809224758569,31.7202031664446,35.1719253662514,27.5141843190452,32.0486607167405,33.8921423277105,33.0760980382282,28.4643896121434,28.914295169109,26.5736274464927,25.5283379822217,25.8875265064278,29.8434708061726,28.6597208065107,44.0421510240569,25.9365659849633,26.6849306160852,21.8118086096044,27.9908855893836,34.9393980586549,25.8637186363549,31.0323979468201,33.244378628011,35.8551165494539,30.9981310757165,27.9457735557647,22.4582838337677,18.0836102523161,21.5230186373761,25.3561103696032,21.1370385641763,27.3861163874479,22.1882986972223,20.1154422907322,26.1803485080238,21.7261203878547,13.453509246216,15.814502718009,18.6070473834252,24.3389385029357,23.9949934049756,18.8367284198008,16.4030797263545,53.5784251483154,21.2230381182943,33.5707851470573,31.572585954185,32.8566347603903,38.191426696734,38.5630698235342,51.9055503301745,46.5023675113263,42.299755722916,47.8364305972461,40.1465121053558,41.7897656115467,42.2375251058014,37.6978209848181,28.2830955585729,31.4729134732183,44.7017529013667,30.3440615076927,30.592250200565,28.5246804955415,27.771801992481,39.1230192076158,42.9482618726302,35.5448606259118,39.1908828642185,50.5752990167035,51.5199286035675,41.6955022725141,45.2996579762533,46.6439577976898,35.3453448063988,47.9757488003948,20.2994788180671,31.7629570739473,57.4096027944423,30.5313818181915,16.9946445308487,20.2556783166383,19.4263232148575,18.8993211443695,22.7502009478506,29.202397128009,28.3556308992454,26.38080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| ||
|EntrezGene=99683 | |||
|HGNC= | |||
|UniProt=Q80ZX0,Q3U882 | |||
|association_with_transcript=173bp_to_ENSMUST00000001079,ENSMUST00000098616,NM_207209,uc008rit.1_5end | |||
|description=CAGE_peak_1_at_Sec24b_5end | |||
|id=chr3:129763591..129763651,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!7.55e-09!41;UBERON:0001004!1.89e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.55e-09,41;UBERON:0001004,1.89e-08,42;UBERON:0005157,9.75e-07,20 | |||
|phase1_expression=12.9720566154883,24.4282785347553,22.7499619694768,20.2651021575576,20.5367249278002,19.809754085603,18.4553986070465,28.019761186822,66.311488133435,67.1765190544121,22.9432077422177,27.4416226943957,29.4465255481674,30.8594020539061,14.3237197580735,10.3262386368811,4.19737126876888,26.498821890092,26.8744289867248,21.6438722416995,44.3075541687074,17.7730802649585,11.4927907221132,12.9593862462659,12.3881011776272,22.9692785646008,15.9381938578858,17.2376986148711,11.9714754257516,17.1380488236753,13.5255611499736,12.065582795733,11.0711661765223,15.8481681015439,15.0202842270663,10.140313366868,11.8418226632174,33.9010620896895,25.0027310247616,17.2762835511353,26.4704169613956,30.0540013381716,27.1885797697446,19.5140067862145,17.8423398946346,18.9053154726532,33.6428278069657,21.8025156380447,27.460772841809,25.8591765768797,28.6972164331993,21.5628846547457,26.1740865450069,33.3666585325218,36.2981303073861,49.3938117189018,39.5416147115484,36.097046459421,32.7752666592548,25.9205579843296,29.1562445612842,29.1406297579454,26.6788438833342,37.7957881258188,37.576921777545,29.8401648277362,25.4660093940644,32.2743376470106,25.9224030771194,22.680997639724,26.2906201689228,25.9942395807461,22.5285911770646,20.0884910712525,21.5652309791032,34.9303138911808,33.0347642998166,34.7309559591711,33.3326177166048,29.0149833006426,30.8313358940121,28.129322010065,23.1721889171146,25.3243174514256,34.3796057497823,32.9984015730508,32.1759998605973,34.11109858603,22.8693103866216,38.3147809741403,41.7404863730416,17.2084775396277,26.5188820146023,17.810205324048,14.2950811838487,14.7848872742121,21.487996280158,17.0430322578058,13.5088722393492,9.54016851177919,16.1969932743183,11.5493829672886,22.9324715735981,42.6640021891999,21.6491041011214,22.0423082963336,20.2209778005913,21.6949371466214,141.121146587709,36.9620926271414,23.0735484598961,22.8349108734106,22.3697032338377,24.2663451289722,37.1580314548827,28.1493164578473,45.7310690308592,83.2892295858691,28.307537662396,30.8974683399552,25.838457659866,19.3950101254089,18.6391761218122,34.255353250351,34.7681533310335,27.0784478521107,21.4469072865597,8.99854096490112,17.0274104277907,35.3505908995382,29.7375391832107,20.2303506901712,30.5930803538407,26.5944075623544,27.6358099264215,25.1473957755024,29.0242186973401,28.9868241521517,22.9977710174644,29.2514179682199,19.9084277732937,15.8632452059096,23.2280147448901,24.866294942893,34.8346875654799,27.6725635815276,28.5790259907173,31.3031078594209,25.2214551731425,33.0935640293684,29.2078866112155,22.3579647076126,35.0339534024253,36.9147296513497,31.6904490068233,24.2821805518562,5.61770549850588,7.72043721344146,16.4814829649444,29.6189854725768,26.5014447778639,23.948254174315,38.5893919003893,31.0887486160898,29.3107514486019,28.8342091490506,29.5100741539581,30.0086929883626,25.342216886676,30.6993157827908,35.6702762001765,25.1463978371572,29.6392655642918,26.0360452395121,27.7582732104648,20.5809224758569,31.7202031664446,35.1719253662514,27.5141843190452,32.0486607167405,33.8921423277105,33.0760980382282,28.4643896121434,28.914295169109,26.5736274464927,25.5283379822217,25.8875265064278,29.8434708061726,28.6597208065107,44.0421510240569,25.9365659849633,26.6849306160852,21.8118086096044,27.9908855893836,34.9393980586549,25.8637186363549,31.0323979468201,33.244378628011,35.8551165494539,30.9981310757165,27.9457735557647,22.4582838337677,18.0836102523161,21.5230186373761,25.3561103696032,21.1370385641763,27.3861163874479,22.1882986972223,20.1154422907322,26.1803485080238,21.7261203878547,13.453509246216,15.814502718009,18.6070473834252,24.3389385029357,23.9949934049756,18.8367284198008,16.4030797263545,53.5784251483154,21.2230381182943,33.5707851470573,31.572585954185,32.8566347603903,38.191426696734,38.5630698235342,51.9055503301745,46.5023675113263,42.299755722916,47.8364305972461,40.1465121053558,41.7897656115467,42.2375251058014,37.6978209848181,28.2830955585729,31.4729134732183,44.7017529013667,30.3440615076927,30.592250200565,28.5246804955415,27.771801992481,39.1230192076158,42.9482618726302,35.5448606259118,39.1908828642185,50.5752990167035,51.5199286035675,41.6955022725141,45.2996579762533,46.6439577976898,35.3453448063988,47.9757488003948,20.2994788180671,31.7629570739473,57.4096027944423,30.5313818181915,16.9946445308487,20.2556783166383,19.4263232148575,18.8993211443695,22.7502009478506,29.202397128009,28.3556308992454,26.3808060004694,30.6555655197742,28.4630243152497,30.9406629744561,38.8101150559318,21.6073312837572,21.2148241403717,18.6473220477485,25.0049729435606,25.5067409170961,21.8850197400821,21.6170113871366,38.9555035385759,50.4160328655892,22.934953397716,60.8430273354061,46.5017548884208,48.4915916422373,34.6179797609096,37.424125141874,30.0225261728746,36.5287844960704,25.6306321196779,27.0366797031821,27.4087900507173,17.1415295874269,25.4251263561107,19.4461447225544,27.3665272290107,28.2701933693789,31.0949941059954,31.5041303944987,23.8833675153757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| |||
|short_description=p1@Sec24b | |||
}} | |||
Revision as of 01:31, 14 September 2013
| Short description: | p1@Sec24b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Sec24b_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 173bp_to_ENSMUST00000001079, ENSMUST00000098616, NM_207209, uc008rit.1_5end |
| EntrezGene: | Sec24b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| respiratory tract | 7.55e-09 | 41 |
| respiratory system | 1.89e-08 | 42 |
| epithelial fold | 9.75e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
