FFCP PHASE1:Mm9::chr3:89240621..89240656,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=229534|HGNC=|UniProt=Q3TVI8,D3YUE1|association_with_transcript=0bp_to_ENSMUST00000038942,ENSMUST00000130858,ENSMUST00000141340,NM_146131,uc008pzr.2_5end|description=CAGE_peak_2_at_Pbxip1_5end|id=chr3:89240621..89240656,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.32e-07!23;UBERON:0001009!1.32e-07!23;UBERON:0000914!2.34e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.32e-07,23;UBERON:0001009,1.32e-07,23|phase1_expression=7.04654927261093,6.97950815278722,6.82498859084304,4.23449895829562,5.00895729946347,5.70789524500425,6.07392865548367,8.52213934714403,1.12630977721333,0.70219357896598,2.56826952338257,1.67521533890206,10.785645985666,9.17914225399473,2.99798785634096,4.45445588257617,1.39912375625629,8.83294063003066,10.6949258212476,14.8536378129311,5.86798702042381,5.56029326724958,6.79119451761232,9.11956809922418,8.71755268055246,6.89078356938024,5.1691439539089,5.60225204983311,8.17100703662408,7.56090389279792,6.20845429834853,3.17515336729816,0.61506478758457,0,4.91047753577167,3.15845826181135,3.87921776898501,23.0192396905299,16.4080422349998,22.5115209908733,40.58797267414,36.8844561877561,43.6959317728038,14.2263404312402,13.1790010585369,15.2343804294196,17.9950009200049,31.1775973624039,44.1569227296288,44.9133066861595,28.4172435899486,35.9381410912429,10.2347389695219,10.1550699881588,11.0910953717013,13.6347501099052,22.349608315223,18.0485232297105,2.22548106945558,1.5869729378161,1.26766280701236,13.8926258148344,14.2287167377782,11.6986963246582,8.89979726310277,9.2362414942993,30.2596111623589,31.5059010363675,0.725827286159344,1.08004750665353,2.10324961351382,8.85518051651791,6.18431914664518,1.10241719293459,2.01275489138296,1.83843757322004,2.20231761998777,5.10749352340751,4.76180253094355,1.58263545276233,1.64677758484337,2.6045668527838,5.862842979029,5.6276261003168,6.87592114995646,1.76777151284201,4.27115042397309,2.23679334990361,4.46784540665786,16.7013147835996,7.8263411949453,3.44169550792555,2.719885334831,7.01614149129162,1.94932925234301,1.79210754838934,10.5333315098814,12.6118438707763,11.950156211732,10.6001872353102,12.1125341007945,15.3991772897181,10.1922095882658,0,2.16491041011214,2.02687892380079,5.05524445014783,6.8510327831436,7.50919862576798,10.6878340126674,4.3371331691534,4.26251669636998,5.76538743140146,7.83757730873637,7.76085467095652,11.4356598110005,7.91023896749996,16.0505286181102,8.84610551949874,21.0296904931632,10.8212344045593,9.69750506270444,1.86391761218122,5.5628351432194,2.51336048176146,8.17462576667492,1.91704199209472,1.79970819298022,1.65191295194984,3.2953940669061,4.57500602818627,1.88481528169297,1.73824320192276,4.09144731728529,3.74018480207208,3.0825839982874,9.77657892963036,13.5603597965001,8.59257378674494,5.47148825304832,5.72529949035896,4.59804208866946,4.14142898552303,4.9732589885786,7.96027040070536,6.91814089538189,5.528401749024,6.46758426847539,3.44908788692548,4.34943984385984,5.80638709741031,6.35667624039967,6.39508673218875,5.92028683087683,5.55611768301447,4.57778813682534,1.40442637462647,2.57347907114715,1.13665399758237,5.79952163099405,11.2572508790926,8.10279276574567,9.70653415899362,10.231740050865,10.4901636763417,8.37122201101468,10.1943892531855,11.3262382096154,13.3293478429919,13.1333971263276,11.9981838127866,13.5965988305559,13.173006917463,15.7021509949635,6.72927835405207,3.19004298375782,6.60837565967596,6.87571473325215,4.26576501070468,4.87697010906921,4.89696353023955,9.27744213267376,6.0042071838115,7.60902504450237,6.64340686162316,9.0584425098206,10.304743560811,14.7227789310452,12.4777015756237,13.4822911298133,12.9682829924817,15.3338780405863,2.65535061334314,5.36968009265725,14.6520056375005,5.29493452397817,6.7883370508669,8.20589092716727,14.1649843158336,15.6466756858378,10.6759134932135,13.0800993757109,2.37162101669719,2.50267658574141,1.17935397067922,2.02375901146368,2.43432145666204,2.17059443777175,2.29163266603278,3.45235364940973,3.72911021582581,3.29473695825698,10.0637744569148,6.69853705803306,2.80833905803104,3.28352541331245,3.76734568396016,2.8946611281802,13.8564892624954,2.27389694124582,4.56301934037672,3.73439188705414,5.63256595892405,6.365237782789,6.42717830392237,8.78101415360095,11.5073655197519,13.9522754478728,12.756381492599,11.6342953448174,14.5055384767352,14.3202567995696,24.1266054302836,16.86107619838,6.39293554924747,7.45029215022778,4.49541651965817,5.50894926983355,2.29508923527346,27.5193310652767,2.83957397474631,2.73307121007647,6.03185513651837,11.709471099675,10.2487390077901,8.49229592366497,6.47697122679831,8.18316402151673,7.51046778098395,5.78378369559253,9.65192579416227,7.83488656135923,8.79589580509311,20.6212653715669,2.65490276679926,2.91336763385978,7.55808892411878,4.33791683438566,6.20133975049623,5.84126781093462,10.8539883130653,4.36240475373007,7.48644494607915,5.3726248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| ||
|EntrezGene=229534 | |||
|HGNC= | |||
|UniProt=Q3TVI8,D3YUE1 | |||
|association_with_transcript=0bp_to_ENSMUST00000038942,ENSMUST00000130858,ENSMUST00000141340,NM_146131,uc008pzr.2_5end | |||
|description=CAGE_peak_2_at_Pbxip1_5end | |||
|id=chr3:89240621..89240656,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.32e-07!23;UBERON:0001009!1.32e-07!23;UBERON:0000914!2.34e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.32e-07,23;UBERON:0001009,1.32e-07,23 | |||
|phase1_expression=7.04654927261093,6.97950815278722,6.82498859084304,4.23449895829562,5.00895729946347,5.70789524500425,6.07392865548367,8.52213934714403,1.12630977721333,0.70219357896598,2.56826952338257,1.67521533890206,10.785645985666,9.17914225399473,2.99798785634096,4.45445588257617,1.39912375625629,8.83294063003066,10.6949258212476,14.8536378129311,5.86798702042381,5.56029326724958,6.79119451761232,9.11956809922418,8.71755268055246,6.89078356938024,5.1691439539089,5.60225204983311,8.17100703662408,7.56090389279792,6.20845429834853,3.17515336729816,0.61506478758457,0,4.91047753577167,3.15845826181135,3.87921776898501,23.0192396905299,16.4080422349998,22.5115209908733,40.58797267414,36.8844561877561,43.6959317728038,14.2263404312402,13.1790010585369,15.2343804294196,17.9950009200049,31.1775973624039,44.1569227296288,44.9133066861595,28.4172435899486,35.9381410912429,10.2347389695219,10.1550699881588,11.0910953717013,13.6347501099052,22.349608315223,18.0485232297105,2.22548106945558,1.5869729378161,1.26766280701236,13.8926258148344,14.2287167377782,11.6986963246582,8.89979726310277,9.2362414942993,30.2596111623589,31.5059010363675,0.725827286159344,1.08004750665353,2.10324961351382,8.85518051651791,6.18431914664518,1.10241719293459,2.01275489138296,1.83843757322004,2.20231761998777,5.10749352340751,4.76180253094355,1.58263545276233,1.64677758484337,2.6045668527838,5.862842979029,5.6276261003168,6.87592114995646,1.76777151284201,4.27115042397309,2.23679334990361,4.46784540665786,16.7013147835996,7.8263411949453,3.44169550792555,2.719885334831,7.01614149129162,1.94932925234301,1.79210754838934,10.5333315098814,12.6118438707763,11.950156211732,10.6001872353102,12.1125341007945,15.3991772897181,10.1922095882658,0,2.16491041011214,2.02687892380079,5.05524445014783,6.8510327831436,7.50919862576798,10.6878340126674,4.3371331691534,4.26251669636998,5.76538743140146,7.83757730873637,7.76085467095652,11.4356598110005,7.91023896749996,16.0505286181102,8.84610551949874,21.0296904931632,10.8212344045593,9.69750506270444,1.86391761218122,5.5628351432194,2.51336048176146,8.17462576667492,1.91704199209472,1.79970819298022,1.65191295194984,3.2953940669061,4.57500602818627,1.88481528169297,1.73824320192276,4.09144731728529,3.74018480207208,3.0825839982874,9.77657892963036,13.5603597965001,8.59257378674494,5.47148825304832,5.72529949035896,4.59804208866946,4.14142898552303,4.9732589885786,7.96027040070536,6.91814089538189,5.528401749024,6.46758426847539,3.44908788692548,4.34943984385984,5.80638709741031,6.35667624039967,6.39508673218875,5.92028683087683,5.55611768301447,4.57778813682534,1.40442637462647,2.57347907114715,1.13665399758237,5.79952163099405,11.2572508790926,8.10279276574567,9.70653415899362,10.231740050865,10.4901636763417,8.37122201101468,10.1943892531855,11.3262382096154,13.3293478429919,13.1333971263276,11.9981838127866,13.5965988305559,13.173006917463,15.7021509949635,6.72927835405207,3.19004298375782,6.60837565967596,6.87571473325215,4.26576501070468,4.87697010906921,4.89696353023955,9.27744213267376,6.0042071838115,7.60902504450237,6.64340686162316,9.0584425098206,10.304743560811,14.7227789310452,12.4777015756237,13.4822911298133,12.9682829924817,15.3338780405863,2.65535061334314,5.36968009265725,14.6520056375005,5.29493452397817,6.7883370508669,8.20589092716727,14.1649843158336,15.6466756858378,10.6759134932135,13.0800993757109,2.37162101669719,2.50267658574141,1.17935397067922,2.02375901146368,2.43432145666204,2.17059443777175,2.29163266603278,3.45235364940973,3.72911021582581,3.29473695825698,10.0637744569148,6.69853705803306,2.80833905803104,3.28352541331245,3.76734568396016,2.8946611281802,13.8564892624954,2.27389694124582,4.56301934037672,3.73439188705414,5.63256595892405,6.365237782789,6.42717830392237,8.78101415360095,11.5073655197519,13.9522754478728,12.756381492599,11.6342953448174,14.5055384767352,14.3202567995696,24.1266054302836,16.86107619838,6.39293554924747,7.45029215022778,4.49541651965817,5.50894926983355,2.29508923527346,27.5193310652767,2.83957397474631,2.73307121007647,6.03185513651837,11.709471099675,10.2487390077901,8.49229592366497,6.47697122679831,8.18316402151673,7.51046778098395,5.78378369559253,9.65192579416227,7.83488656135923,8.79589580509311,20.6212653715669,2.65490276679926,2.91336763385978,7.55808892411878,4.33791683438566,6.20133975049623,5.84126781093462,10.8539883130653,4.36240475373007,7.48644494607915,5.37262488490887,4.21674434299995,6.18813259489121,18.3837387107046,3.24109969256358,6.98536892426874,7.71613326113732,6.20690817747958,10.3453914209201,11.6829804627506,16.4411072521884,5.86679270159276,10.1679394014634,8.82113592219848,4.61681508236144,6.94297034792394,5.12659861889325,6.68485126417564,6.07321329056727,10.7847909553045,7.41701208042039,5.63873906632914,5.15967169908056,6.48180845793991,5.46268525313604,6.01454601972511,6.86334519619568,4.24946074984638,3.91864066506242,4.97519905695926,12.4107180341965,2.68885594543965,5.08298667817122,6.372315108486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| |||
|short_description=p2@Pbxip1 | |||
}} | |||
Revision as of 02:51, 14 September 2013
| Short description: | p2@Pbxip1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Pbxip1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000038942, ENSMUST00000130858, ENSMUST00000141340, NM_146131, uc008pzr.2_5end |
| EntrezGene: | Pbxip1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cardiovascular system | 1.32e-07 | 23 |
| circulatory system | 1.32e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
