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FFCP PHASE1:Mm9::chr3:89883541..89883586,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=59069|HGNC=|UniProt=E9Q7Q3,P21107|association_with_transcript=0bp_to_ENSMUST00000118566,ENSMUST00000131354,ENSMUST00000147430,uc008qbh.1,uc008qbi.1,uc008qbj.1_5end|description=CAGE_peak_1_at_Tpm3_5end|id=chr3:89883541..89883586,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.50e-07!15;UBERON:0000065!5.37e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.73e-07,31;UBERON:0000344,4.50e-07,15;UBERON:0000065,5.37e-07,41;UBERON:0004119,8.09e-07,118;UBERON:0000925,8.09e-07,118;UBERON:0006595,8.09e-07,118|phase1_expression=26.1042620780814,72.9358601966265,50.959914811628,62.307627529207,61.6101747834007,45.1595241442984,48.1242039626783,42.6106967357202,27.453800819575,29.4921303165712,28.5934006936593,24.8091414475496,35.2673503658284,41.2624299417668,14.3237197580735,24.4995073541689,23.785103856357,49.5275599612433,38.1178125423954,34.7999514474385,29.1698485218169,37.4326886027338,39.9635677382571,56.1573404004857,46.7994933377027,57.423196411502,49.1068675621345,53.6523369387864,50.9262764143082,52.6742971198255,55.6543581744815,8.89042942843484,9.22597181376855,0,31.1959749331377,33.2469290716985,31.4420808644048,91.2398955006459,76.5708637633324,104.181225050786,76.4700934440319,66.2554120409692,86.9063531925765,31.2224108579432,30.2103255034153,32.854868636941,33.6428278069657,29.6514212677407,41.0813161713462,30.7199240537368,46.1955191363696,25.8754615856949,40.4356080599145,31.1905721064878,41.3395372945231,58.140632544124,46.7049507100173,40.2224231976405,30.9544185115185,20.1016572123373,21.5502677192101,58.2812595158907,46.2433293977792,61.6431306337758,44.4989863155138,54.7069688508497,30.8588113833957,31.5059010363675,34.5286408987231,27.2711995430015,31.3384192413559,20.2812198926701,24.9581451275323,30.5002090045236,35.6545152187839,21.1420320920305,9.91042928994498,21.8345348125671,20.8904885228491,28.0917792865313,35.954643935747,36.4639359389732,25.9640189071284,19.1339287410771,24.4477196442896,16.4992007865254,20.786265396669,24.9775257405903,69.3651930931966,73.1532701833684,43.4796733052517,22.371020801516,17.6792546764015,12.4131734076698,10.3964226791627,11.6486990645307,20.5048853392358,47.0387690315439,43.1244767640762,33.5672595784823,28.0278405355594,29.5150898052931,58.6052051325285,85.3280043783997,40.7003157101083,47.3782948438434,41.4530044912122,26.71902785426,39.3585583143701,30.5790806473539,44.5857289788969,29.8376168745898,36.6678640637133,34.5154846865506,29.5147654910619,38.0769771728917,41.0343646439061,19.5209131841881,31.8459798701955,31.5445357397448,21.6424688091186,24.7286379098963,13.0474232852686,19.0307518057506,17.1746299587033,42.6613282198348,51.2808732885339,38.3937747835781,43.203877204842,17.5255048103643,18.7575247155637,35.6858360000535,24.6830534673033,25.3158302757027,18.90871205492,21.7403292510795,38.5971188992699,28.6136032403214,20.7232661915613,18.3084414621232,30.1879427673473,34.7152177694544,31.6909348457415,31.3466021098287,25.3776141834453,25.8789714975397,23.4254311399322,11.1242449417777,41.1734866501729,27.231275544166,35.0142737086258,30.2490110750053,29.1949611686878,29.6014341543842,23.8707278233214,32.2435512245959,42.8350044261073,37.3154465316337,46.6028139008772,34.5900040134288,26.0323926579017,25.0286265430811,28.6461130058104,19.8731874064878,23.7571353846563,17.2075119115302,17.1694976895756,19.1495161482158,25.013097186849,20.0284306176496,13.7006288132496,17.1053985287639,16.0271584162467,14.4942932261202,23.5524742391823,41.0589403393345,50.2236550135373,36.7586287662327,37.1121555931307,32.9776074041823,39.5623106258827,33.2777815628515,30.0210359190575,33.669935821923,50.3000805237182,36.7278669034544,37.4489461112402,36.2100779114894,36.8482124655137,43.1433316154026,39.7694011769437,36.2437117322948,49.6929900497074,33.70331121987,30.4310886317317,31.9732584717143,21.5287260756065,30.4389458323983,29.0255705400341,26.2746063403692,23.863806631889,17.8925887686611,16.3048944897932,30.198964134613,27.9113773060748,26.3088671490279,26.5746759018939,22.9118301764796,20.1154422907322,16.686375972147,20.4290385736545,29.6526326243128,50.3188722845741,24.9334434937897,26.5232022147376,22.9846778931872,24.2186508254581,24.6046195895317,45.2645315908181,30.1291344715071,47.7487380975136,43.1152517868978,38.0198202227373,39.5314767562685,29.5174114698657,39.6121305151332,42.2462186204592,52.7085961364084,48.1553401345611,43.751505029102,54.568454269623,48.7467327419694,45.2373851817817,41.3368319702219,23.1129208318947,20.1433824802455,21.0321272884007,21.918585392742,45.2460449239624,9.84636616097055,26.5026904309656,30.0637833108412,21.5423397732799,25.5696613809231,21.3886727119098,22.6461224631066,21.4549671887694,16.6585839009448,21.3455400091123,20.8858855674175,25.9750355931132,32.5860054711077,29.4825396429973,24.5805483229078,14.6019652173959,34.7176309701623,37.7904446205939,23.7642400492432,24.5100571091041,21.213025208131,33.3372498187005,37.8075078656606,34.580245703318,16.4339114126624,16.8669773719998,18.5643977846736,16.3411010761818,35.1119133361055,35.0562033051265,36.4372959553707,28.1970971491215,31.2145430803623,33.2389021616284,33.4911444026059,45.7609830724235,38.1297727554876,23.155481795771,26.5466867235783,22.4435553107309,29.8548978394372,29.6043413127778,24.4569940620141,37.6010279252507,25.5886916774503,27.5102118084543,32.4027382702259,28.7051517423053,21.4740040985348,25.4251263561107,33.1728351149458,52.5233348681013,52.9016489783427,49.6137905957881,29.5947891584685,40.4910071783853,34.970948345818,36.5058051977688,33.454127362315,24.8933322670642,25.0847684275767,29.6725906053956,36.3840759357801,30.2002887769877,19.2615187056947,11.837551712368,37.9772026951706,40.0409546906176,35.9734698436488,40.5561845720076,30.5810587138308,28.8698807068555,30.4678260534843,28.9411790614962,13.7702948870823,8.64090018773596,30.0210564596769,43.180470856805,35.3325692647006,32.6101265674265,34.5521522638239,36.3586879249715,35.8182439569507,41.9438257175799,39.9827141794665,38.4082305541199,32.6676839843363,33.1356794515158,38.8695840226931,33.5436709261103,20.6324649089842,35.2957665864763,41.5375156101872,71.3509619547333,26.8533535704745,36.0350352866269,35.7145667321167,25.2954687313298,16.551879433167,25.413832917768,28.0798394269378,22.3429250241365,15.4667864109319,19.182310553578,12.8416962556249,27.0009000092722,20.7147753483141,13.1411298605419,15.0150490408028,51.5823117493358,30.3258903784784,31.5857170645148,26.498632160444,32.6996533699652,29.2311178435522,22.8914129635664,22.2517861818006,19.8969909946925,18.9522908822848,21.0387818908899,25.6531824285064,30.5271314351817,28.7472934297863,30.8428468291643,23.3383908728706,30.8252307013316,34.7236596834669,26.7855835522149,23.2574293812348,19.2006781335833,27.1537983423786,27.8970342238365,23.5461194944372,28.0445953637685,27.6689767805782,30.3660434968802,24.4654831637194,27.8398433384017,16.2731258780744,24.557448751704,28.9603178184157,20.4615521584845,26.6491366839861,22.9558867067558,32.7251857098709,22.92529762765,24.2804291074577,21.0417165275728,20.2944105589954,21.7955765483196|short_description=p1@Tpm3}}
|EntrezGene=59069
|HGNC=
|UniProt=E9Q7Q3,P21107
|association_with_transcript=0bp_to_ENSMUST00000118566,ENSMUST00000131354,ENSMUST00000147430,uc008qbh.1,uc008qbi.1,uc008qbj.1_5end
|description=CAGE_peak_1_at_Tpm3_5end
|id=chr3:89883541..89883586,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!4.50e-07!15;UBERON:0000065!5.37e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.73e-07,31;UBERON:0000344,4.50e-07,15;UBERON:0000065,5.37e-07,41;UBERON:0004119,8.09e-07,118;UBERON:0000925,8.09e-07,118;UBERON:0006595,8.09e-07,118
|phase1_expression=26.1042620780814,72.9358601966265,50.959914811628,62.307627529207,61.6101747834007,45.1595241442984,48.1242039626783,42.6106967357202,27.453800819575,29.4921303165712,28.5934006936593,24.8091414475496,35.2673503658284,41.2624299417668,14.3237197580735,24.4995073541689,23.785103856357,49.5275599612433,38.1178125423954,34.7999514474385,29.1698485218169,37.4326886027338,39.9635677382571,56.1573404004857,46.7994933377027,57.423196411502,49.1068675621345,53.6523369387864,50.9262764143082,52.6742971198255,55.6543581744815,8.89042942843484,9.22597181376855,0,31.1959749331377,33.2469290716985,31.4420808644048,91.2398955006459,76.5708637633324,104.181225050786,76.4700934440319,66.2554120409692,86.9063531925765,31.2224108579432,30.2103255034153,32.854868636941,33.6428278069657,29.6514212677407,41.0813161713462,30.7199240537368,46.1955191363696,25.8754615856949,40.4356080599145,31.1905721064878,41.3395372945231,58.140632544124,46.7049507100173,40.2224231976405,30.9544185115185,20.1016572123373,21.5502677192101,58.2812595158907,46.2433293977792,61.6431306337758,44.4989863155138,54.7069688508497,30.8588113833957,31.5059010363675,34.5286408987231,27.2711995430015,31.3384192413559,20.2812198926701,24.9581451275323,30.5002090045236,35.6545152187839,21.1420320920305,9.91042928994498,21.8345348125671,20.8904885228491,28.0917792865313,35.954643935747,36.4639359389732,25.9640189071284,19.1339287410771,24.4477196442896,16.4992007865254,20.786265396669,24.9775257405903,69.3651930931966,73.1532701833684,43.4796733052517,22.371020801516,17.6792546764015,12.4131734076698,10.3964226791627,11.6486990645307,20.5048853392358,47.0387690315439,43.1244767640762,33.5672595784823,28.0278405355594,29.5150898052931,58.6052051325285,85.3280043783997,40.7003157101083,47.3782948438434,41.4530044912122,26.71902785426,39.3585583143701,30.5790806473539,44.5857289788969,29.8376168745898,36.6678640637133,34.5154846865506,29.5147654910619,38.0769771728917,41.0343646439061,19.5209131841881,31.8459798701955,31.5445357397448,21.6424688091186,24.7286379098963,13.0474232852686,19.0307518057506,17.1746299587033,42.6613282198348,51.2808732885339,38.3937747835781,43.203877204842,17.5255048103643,18.7575247155637,35.6858360000535,24.6830534673033,25.3158302757027,18.90871205492,21.7403292510795,38.5971188992699,28.6136032403214,20.7232661915613,18.3084414621232,30.1879427673473,34.7152177694544,31.6909348457415,31.3466021098287,25.3776141834453,25.8789714975397,23.4254311399322,11.1242449417777,41.1734866501729,27.231275544166,35.0142737086258,30.2490110750053,29.1949611686878,29.6014341543842,23.8707278233214,32.2435512245959,42.8350044261073,37.3154465316337,46.6028139008772,34.5900040134288,26.0323926579017,25.0286265430811,28.6461130058104,19.8731874064878,23.7571353846563,17.2075119115302,17.1694976895756,19.1495161482158,25.013097186849,20.0284306176496,13.7006288132496,17.1053985287639,16.0271584162467,14.4942932261202,23.5524742391823,41.0589403393345,50.2236550135373,36.7586287662327,37.1121555931307,32.9776074041823,39.5623106258827,33.2777815628515,30.0210359190575,33.669935821923,50.3000805237182,36.7278669034544,37.4489461112402,36.2100779114894,36.8482124655137,43.1433316154026,39.7694011769437,36.2437117322948,49.6929900497074,33.70331121987,30.4310886317317,31.9732584717143,21.5287260756065,30.4389458323983,29.0255705400341,26.2746063403692,23.863806631889,17.8925887686611,16.3048944897932,30.198964134613,27.9113773060748,26.3088671490279,26.5746759018939,22.9118301764796,20.1154422907322,16.686375972147,20.4290385736545,29.6526326243128,50.3188722845741,24.9334434937897,26.5232022147376,22.9846778931872,24.2186508254581,24.6046195895317,45.2645315908181,30.1291344715071,47.7487380975136,43.1152517868978,38.0198202227373,39.5314767562685,29.5174114698657,39.6121305151332,42.2462186204592,52.7085961364084,48.1553401345611,43.751505029102,54.568454269623,48.7467327419694,45.2373851817817,41.3368319702219,23.1129208318947,20.1433824802455,21.0321272884007,21.918585392742,45.2460449239624,9.84636616097055,26.5026904309656,30.0637833108412,21.5423397732799,25.5696613809231,21.3886727119098,22.6461224631066,21.4549671887694,16.6585839009448,21.3455400091123,20.8858855674175,25.9750355931132,32.5860054711077,29.4825396429973,24.5805483229078,14.6019652173959,34.7176309701623,37.7904446205939,23.7642400492432,24.5100571091041,21.213025208131,33.3372498187005,37.8075078656606,34.580245703318,16.4339114126624,16.8669773719998,18.5643977846736,16.3411010761818,35.1119133361055,35.0562033051265,36.4372959553707,28.1970971491215,31.2145430803623,33.2389021616284,33.4911444026059,45.7609830724235,38.1297727554876,23.155481795771,26.5466867235783,22.4435553107309,29.8548978394372,29.6043413127778,24.4569940620141,37.6010279252507,25.5886916774503,27.5102118084543,32.4027382702259,28.7051517423053,21.4740040985348,25.4251263561107,33.1728351149458,52.5233348681013,52.9016489783427,49.6137905957881,29.5947891584685,40.4910071783853,34.970948345818,36.5058051977688,33.454127362315,24.8933322670642,25.0847684275767,29.6725906053956,36.3840759357801,30.2002887769877,19.2615187056947,11.837551712368,37.9772026951706,40.0409546906176,35.9734698436488,40.5561845720076,30.5810587138308,28.8698807068555,30.4678260534843,28.9411790614962,13.7702948870823,8.64090018773596,30.0210564596769,43.180470856805,35.3325692647006,32.6101265674265,34.5521522638239,36.3586879249715,35.8182439569507,41.9438257175799,39.9827141794665,38.4082305541199,32.6676839843363,33.1356794515158,38.8695840226931,33.5436709261103,20.6324649089842,35.2957665864763,41.5375156101872,71.3509619547333,26.8533535704745,36.0350352866269,35.7145667321167,25.2954687313298,16.551879433167,25.413832917768,28.0798394269378,22.3429250241365,15.4667864109319,19.182310553578,12.8416962556249,27.0009000092722,20.7147753483141,13.1411298605419,15.0150490408028,51.5823117493358,30.3258903784784,31.5857170645148,26.498632160444,32.6996533699652,29.2311178435522,22.8914129635664,22.2517861818006,19.8969909946925,18.9522908822848,21.0387818908899,25.6531824285064,30.5271314351817,28.7472934297863,30.8428468291643,23.3383908728706,30.8252307013316,34.7236596834669,26.7855835522149,23.2574293812348,19.2006781335833,27.1537983423786,27.8970342238365,23.5461194944372,28.0445953637685,27.6689767805782,30.3660434968802,24.4654831637194,27.8398433384017,16.2731258780744,24.557448751704,28.9603178184157,20.4615521584845,26.6491366839861,22.9558867067558,32.7251857098709,22.92529762765,24.2804291074577,21.0417165275728,20.2944105589954,21.7955765483196
|short_description=p1@Tpm3
}}

Revision as of 02:53, 14 September 2013

Short description:p1@Tpm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tpm3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000118566, ENSMUST00000131354, ENSMUST00000147430, uc008qbh.1, uc008qbi.1, uc008qbj.1_5end
EntrezGene:Tpm3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tpm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I572.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I650.96
CD326+ enterocyte, pool1.CNhs13542.11848-124I362.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I461.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I745.16
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I848.12
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E942.61
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E727.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E628.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.27
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E841.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A249.53
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.12
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A634.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H237.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I939.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D156.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D246.80
GP2+ M cell, pool1.CNhs13228.11845-124H957.42
GP2+ M cell, pool2.CNhs13231.11846-124I149.11
GP2+ M cell, pool3.CNhs13240.11847-124I253.65
Ileum epithelium, pool1.CNhs13199.10252-104B950.93
Ileum epithelium, pool2.CNhs13232.10253-104C152.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C855.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F531.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F633.25
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F731.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G891.24
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H176.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3104.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G976.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H486.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.21
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B332.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B733.64
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B841.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C330.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C446.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.19
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C158.14
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E146.70
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C540.22
Mouse Granule cells, donor1.CNhs12131.11713-123C330.95
Mouse Granule cells, donor2.CNhs12357.11731-123E320.10
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C658.28
Mouse Meningeal cells, donor3.CNhs12109.11639-122D146.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C761.64
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E744.50
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D254.71
Mouse Microglia, donor1.CNhs12629.11718-123C830.86
Mouse Microglia, donor2.CNhs12634.11736-123E831.51
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F235.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.98
Mouse Schwann, donor1.CNhs12507.11728-123D969.37
Mouse Schwann, donor2.CNhs12573.11746-123F973.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G343.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I747.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E343.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.57
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I858.61
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G140.70
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G247.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G341.45
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.72
accessory axillary lymph node, adult.CNhs10475.1063-29H939.36
adrenal gland, adult.CNhs10508.49-24D730.58
adrenal gland, embryo E14.CNhs11038.406-44C544.59
adrenal gland, embryo E16.CNhs11004.1254-43D629.84
adrenal gland, embryo E17.CNhs11043.1263-45I136.67
adrenal gland, embryo E18.CNhs11026.1262-18F534.52
adrenal gland, neonate N00.CNhs11191.1311-23C129.51
adrenal gland, neonate N25.CNhs11223.1377-27I338.08
amnion, adult pregnant day17.5.CNhs10488.583-22A841.03
aorta, adult.CNhs10498.46-23H119.52
bone (os femoris), adult.CNhs10483.56-12G231.85
bone (os femoris), neonate N02.CNhs11227.1985-43F531.54
bone (os femoris), neonate N16.CNhs11225.1525-43A621.64
bone (os femoris), neonate N20.CNhs11195.1350-25C324.73
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B219.03
cerebellum, neonate N30.CNhs11135.1395-42I217.17
colon, adult.CNhs10468.36-18H742.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C751.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D138.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D443.20
corpora quadrigemina, adult.CNhs10501.16-22A417.53
corpus striatum, adult.CNhs10487.19-21D818.76
corpus striatum, neonate N00.CNhs11226.630-43F135.69
cortex, adult.CNhs10473.12-14D524.68
cortex, neonate N30.CNhs11107.1392-42F225.32
diencephalon, adult.CNhs10482.20-12F218.91
diencephalon, neonate N30.CNhs11201.1388-42B221.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B138.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.61
epididymis, adult.CNhs10490.58-23B220.72
eyeball, adult.CNhs10484.31-12G418.31
eyeball, embryo E12.CNhs11016.345-16C630.19
eyeball, embryo E14.CNhs10521.399-16E234.72
eyeball, embryo E15.CNhs10593.426-16C931.69
eyeball, embryo E17.CNhs11023.1261-18D431.35
eyeball, neonate N00.CNhs11207.633-15C625.38
eyeball, neonate N01.CNhs11140.1532-43E725.88
eyeball, neonate N02.CNhs11205.1551-44G823.43
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E241.17
forelimb, embryo E12.CNhs10600.359-14H227.23
forelimb, embryo E13.CNhs10589.384-1E235.01
forelimb, embryo E14.CNhs10577.413-26A830.25
forelimb, embryo E15.CNhs11007.437-20E729.19
forelimb, embryo E17.CNhs10598.1517-43C429.60
forelimb, embryo E18.CNhs11008.1520-43B523.87
gonad, embryo E13.CNhs11044.1564-45I632.24
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C842.84
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D237.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D546.60
heart, embryo E11.CNhs10586.331-24E934.59
heart, embryo E12.CNhs11015.353-12F526.03
heart, embryo E13.CNhs11013.376-3I925.03
heart, embryo E14.CNhs10597.403-26D428.65
heart, embryo E15.CNhs11017.431-16C819.87
heart, embryo E16.CNhs11021.457-17C623.76
heart, embryo E17.CNhs11025.479-18E517.21
heart, embryo E18.CNhs11030.1283-20G317.17
heart, neonate N00.CNhs11213.639-21E319.15
heart, neonate N03.CNhs11221.1349-25I225.01
heart, neonate N10.CNhs11118.749-24G120.03
heart, neonate N16.CNhs11209.782-15G113.70
heart, neonate N20.CNhs11127.821-26I617.11
heart, neonate N25.CNhs11196.1351-25D316.03
heart, neonate N30.CNhs11202.1390-42D214.49
hippocampus, adult.CNhs10478.13-16E823.55
hippocampus, neonate N00.CNhs11228.627-43G141.06
intestinal mucosa, adult.CNhs10506.860-29I350.22
intestine, adult.CNhs10496.178-9A336.76
intestine, embryo E12.CNhs11019.1251-16I537.11
intestine, embryo E13.CNhs11010.381-16D532.98
intestine, embryo E15.CNhs10602.976-16D839.56
intestine, embryo E16.CNhs10585.463-22H433.28
intestine, embryo E17.CNhs10582.482-18D330.02
intestine, embryo E18.CNhs10526.1289-20F733.67
intestine, neonate N00.CNhs11126.644-26D150.30
intestine, neonate N01.CNhs11192.1322-23E936.73
intestine, neonate N06.CNhs11102.688-20B837.45
intestine, neonate N07.CNhs11095.720-20F236.21
intestine, neonate N10.CNhs11098.755-23A536.85
intestine, neonate N20.CNhs11187.827-18D143.14
intestine, neonate N25.CNhs11121.1352-25E339.77
intestine, neonate N30.CNhs11131.1384-42G136.24
kidney, embryo E14.CNhs10606.411-4I949.69
kidney, embryo E15.CNhs10997.434-16F833.70
kidney, embryo E16.CNhs10584.464-22A530.43
kidney, embryo E17.CNhs11028.483-18I231.97
kidney, embryo E18.CNhs11001.1288-20C721.53
kidney, neonate N00.CNhs11214.646-21G730.44
kidney, neonate N10.CNhs11206.758-6D529.03
kidney, neonate N20.CNhs11113.832-19I126.27
kidney, neonate N25.CNhs11122.1353-25F323.86
kidney, neonate N30.CNhs11203.1385-42H117.89
liver, adult pregnant day01.CNhs10466.508-5B216.30
liver, embryo E12.CNhs10601.355-15F830.20
liver, embryo E13.CNhs10524.378-3H627.91
liver, embryo E14.CNhs10594.409-16E126.31
liver, embryo E15.CNhs10520.433-16D726.57
liver, embryo E16.CNhs10523.462-17F522.91
liver, embryo E17.CNhs10510.481-18A320.12
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F420.43
liver, neonate N03.CNhs11123.1345-25G229.65
liver, neonate N06.CNhs11101.684-20A850.32
liver, neonate N07.CNhs11103.716-20H224.93
liver, neonate N10.CNhs11115.751-24B926.52
liver, neonate N20.CNhs11220.823-25A322.98
liver, neonate N25.CNhs11198.1368-26H124.22
liver, neonate N30.CNhs11106.1382-42D124.60
lung, adult.CNhs10474.28-22B145.26
lung, embryo E12.CNhs10522.354-16G230.13
lung, embryo E14.CNhs10604.404-26F847.75
lung, embryo E15.CNhs11020.432-17C543.12
lung, embryo E16.CNhs10998.458-17B638.02
lung, embryo E17.CNhs10605.480-44A639.53
lung, embryo E18.CNhs10583.1287-20I629.52
lung, neonate N00.CNhs11224.640-42C639.61
lung, neonate N06.CNhs11212.683-20E542.25
lung, neonate N07.CNhs11111.715-19A352.71
lung, neonate N10.CNhs11219.750-23E648.16
lung, neonate N20.CNhs11109.822-18A443.75
lung, neonate N25.CNhs11119.1359-25C754.57
lung, neonate N30.CNhs11133.1394-42H248.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A145.24
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A141.34
mammary gland, adult lactating day02.CNhs10480.595-22B623.11
mammary gland, adult pregnant day19.CNhs10476.588-5H220.14
medulla oblongata, adult.CNhs10477.17-12C221.03
medulla oblongata, neonate N30.CNhs11200.1396-42A321.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C745.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.50
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E230.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.57
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D821.39
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.65
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.35
olfactory brain, adult.CNhs10489.18-22I920.89
ovary, adult.CNhs10507.91-2I725.98
ovary, embryo E18.CNhs11040.505-44H732.59
ovary, neonate N00.CNhs11217.1299-22I429.48
oviduct, adult pregnant day01.CNhs10500.988-6G624.58
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F434.72
pancreas, embryo E15.CNhs11042.1556-45F237.79
pancreas, embryo E16.CNhs11003.460-26E523.76
pancreas, embryo E17.CNhs10599.1558-45G324.51
pancreas, embryo E18.CNhs10580.1535-43I721.21
pancreas, neonate N00.CNhs11105.645-26G933.34
pancreas, neonate N01.CNhs11138.1531-43D737.81
pancreas, neonate N02.CNhs11139.1539-43D834.58
pancreas, neonate N16.CNhs11136.787-43B616.43
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G816.34
pituitary gland, embryo E12.CNhs11018.346-16E635.11
pituitary gland, embryo E13.CNhs11009.370-44C735.06
pituitary gland, embryo E14.CNhs11037.398-44A536.44
pituitary gland, embryo E15.CNhs10592.427-16B928.20
pituitary gland, embryo E16.CNhs11036.449-43F631.21
pituitary gland, embryo E17.CNhs11039.1265-44F533.24
pituitary gland, neonate N00.CNhs11190.1308-22E933.49
placenta, adult pregnant day10.CNhs10472.539-13I745.76
placenta, adult pregnant day17.CNhs10464.577-18G338.13
prostate, adult.CNhs10470.859-1F823.16
skin, adult.CNhs10492.30-1C326.55
skin, neonate N00.CNhs11124.650-25G422.44
skin, neonate N03.CNhs11215.662-22H329.85
skin, neonate N06.CNhs11097.693-20I529.60
skin, neonate N10.CNhs11108.762-6C424.46
small intestine, neonate N16.CNhs11114.790-21I137.60
spinal cord, adult.CNhs10505.24-13C925.59
spleen, adult.CNhs10465.25-2G227.51
spleen, embryo E16.CNhs11035.461-43C132.40
spleen, embryo E18.CNhs11011.1271-21F228.71
spleen, neonate N10.CNhs11116.752-24D121.47
spleen, neonate N20.CNhs11112.824-19H125.43
spleen, neonate N25.CNhs11099.1354-25G333.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C652.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C952.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.61
stomach, adult.CNhs10503.33-1H629.59
stomach, embryo E12.CNhs10588.356-43E340.49
stomach, embryo E15.CNhs10603.1252-16G834.97
stomach, embryo E16.CNhs11022.459-17D436.51
stomach, embryo E17.CNhs11006.1035-18D533.45
stomach, embryo E18.CNhs10999.1286-20C624.89
stomach, neonate N03.CNhs11193.1340-24B825.08
stomach, neonate N07.CNhs11210.718-18A929.67
stomach, neonate N25.CNhs11104.1355-25E436.38
stomach, neonate N30.CNhs11134.1386-42I130.20
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G511.84
testis, embryo E13.CNhs11031.389-23F537.98
testis, embryo E15.CNhs11034.443-27C540.04
testis, embryo E16.CNhs11033.470-26G535.97
testis, embryo E17.CNhs11029.486-18I540.56
testis, embryo E18.CNhs11027.503-18G530.58
testis, neonate N00.CNhs11189.1300-22B728.87
testis, neonate N07.CNhs11222.726-26I430.47
testis, neonate N10.CNhs11204.763-44D928.94
testis, neonate N20.CNhs11110.839-18H313.77
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B530.02
thymus, embryo E14.CNhs11041.402-44I443.18
thymus, embryo E15.CNhs11005.430-45I235.33
thymus, embryo E16.CNhs11002.456-26C532.61
thymus, embryo E17.CNhs10581.478-18C134.55
thymus, embryo E18.CNhs10595.1273-19G436.36
thymus, neonate N02.CNhs11181.1541-43F835.82
thymus, neonate N03.CNhs11137.2104-43C741.94
thymus, neonate N06.CNhs11197.681-26C439.98
thymus, neonate N07.CNhs11211.713-19D338.41
thymus, neonate N10.CNhs11194.748-24E432.67
thymus, neonate N20.CNhs11186.820-7A233.14
thymus, neonate N25.CNhs11125.1362-25G738.87
thymus, neonate N30.CNhs11132.1393-42G233.54
tongue, adult.CNhs10499.32-1B420.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H335.30
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F741.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G571.35
urinary bladder, adult.CNhs10481.879-12E426.85
uterus, adult pregnant day19.CNhs10497.590-15F536.04
uterus, adult.CNhs10509.92-27E535.71
vagina, adult.CNhs10502.89-27D525.30
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.41
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I851.58
whole body, embryo E12.CNhs10587.857-27C930.33
whole body, embryo E13.CNhs10512.372-23H231.59
whole body, embryo E14.5.CNhs10578.420-27D226.50
whole body, embryo E14.CNhs10519.395-14B132.70
whole body, embryo E16.CNhs10514.453-14F229.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.65
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G530.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.83
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G534.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G526.79
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.26
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.90
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.55
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G524.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.65
whole body, embryo E17.5.CNhs10513.490-9F922.96
whole body, embryo E17.CNhs10517.475-3I532.73
whole body, embryo E18.CNhs10516.493-3B322.93
whole body, neonate N00.CNhs10525.657-19C224.28
whole body, neonate N01.CNhs10576.659-23C621.04
whole body, neonate N06.CNhs10515.692-21D120.29
whole body, neonate N10.CNhs10518.761-6B421.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine1.73e-0731
mucosa4.50e-0715
respiratory tract5.37e-0741
endoderm-derived structure8.09e-07118
endoderm8.09e-07118
presumptive endoderm8.09e-07118







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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