FFCP PHASE1:Mm9::chr4:101927538..101927548,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18578|HGNC=|MCL_coexpression_id=20|UniProt=Q8VBU5|association_with_transcript=0bp_to_NM_019840_5end|description=CAGE_peak_19_at_Pde4b_5end|id=chr4:101927538..101927548,+|ontology_enrichment_celltype=CL:0000117!9.01e-11!23;CL:0000337!9.01e-11!23;CL:0000540!1.16e-10!33;CL:0000047!1.16e-10!33;CL:0000031!1.16e-10!33;CL:0000404!1.16e-10!33;CL:0000221!2.86e-08!44;CL:0000133!2.86e-08!44;CL:0000393!1.09e-07!39;CL:0000211!1.09e-07!39;CL:0002319!1.28e-07!43|ontology_enrichment_celltype_v019_2=CL:0002610,6.17e-13,3;CL:0000197,6.98e-10,2;CL:0002491,6.98e-10,2;CL:0000098,6.98e-10,2;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0000221,1.27e-07,44;CL:0000133,1.27e-07,44;CL:0000393,5.27e-07,39;CL:0000211,5.27e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.59e-23!73;UBERON:0005743!5.59e-23!73;UBERON:0000073!8.42e-22!75;UBERON:0001016!8.42e-22!75;UBERON:0000033!5.67e-21!63;UBERON:0001049!4.53e-20!52;UBERON:0005068!4.53e-20!52;UBERON:0006241!4.53e-20!52;UBERON:0007135!4.53e-20!52;UBERON:0000955!2.43e-19!50;UBERON:0006238!2.43e-19!50;UBERON:0002616!1.66e-18!49;UBERON:0004121!3.22e-17!102;UBERON:0000924!3.22e-17!102;UBERON:0006601!3.22e-17!102;UBERON:0002346!2.06e-15!71;UBERON:0003075!2.06e-15!71;UBERON:0007284!2.06e-15!71;UBERON:0003080!3.18e-14!40;UBERON:0003056!4.49e-14!49;UBERON:0002780!2.07e-13!39;UBERON:0001890!2.07e-13!39;UBERON:0006240!2.07e-13!39;UBERON:0002020!3.39e-13!34;UBERON:0007811!3.31e-12!86;UBERON:0000153!2.96e-10!94;UBERON:0002791!3.15e-10!29;UBERON:0003528!3.15e-10!29;UBERON:0001893!3.15e-10!29;UBERON:0004111!1.77e-09!122;UBERON:0000025!4.08e-09!114;UBERON:0002420!5.51e-07!8;UBERON:0007245!5.51e-07!8;UBERON:0010009!5.51e-07!8;UBERON:0010011!5.51e-07!8;UBERON:0000454!5.51e-07!8;UBERON:0002298!8.07e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.89e-19,73;UBERON:0001016,1.15e-18,75;UBERON:0004121,7.17e-16,95;UBERON:0000924,7.17e-16,95;UBERON:0006601,7.17e-16,95;UBERON:0000073,1.92e-14,54;UBERON:0004684,6.17e-13,3;UBERON:0002275,6.17e-13,3;UBERON:0000955,2.03e-12,47;UBERON:0006238,2.03e-12,47;UBERON:0001049,4.40e-11,52;UBERON:0005068,4.40e-11,52;UBERON:0006241,4.40e-11,52;UBERON:0007135,4.40e-11,52;UBERON:0002616,9.57e-11,46;UBERON:0010371,3.61e-10,73;UBERON:0004766,6.98e-10,2;UBERON:0008193,6.98e-10,2;UBERON:0005913,6.98e-10,2;UBERON:0011158,6.98e-10,2;UBERON:0005744,6.98e-10,2;UBERON:0003457,6.98e-10,2;UBERON:0008001,6.98e-10,2;UBERON:0007497,6.98e-10,2;UBERON:0009955,6.98e-10,2;UBERON:0003067,6.98e-10,2;UBERON:0002546,6.98e-10,2;UBERON:0007914,6.98e-10,2;UBERON:0005253,6.98e-10,2;UBERON:0002227,6.98e-10,2;UBERON:0001846,6.98e-10,2;UBERON:0004339,6.98e-10,2;UBERON:0002105,6.98e-10,2;UBERON:0001678,6.98e-10,2;UBERON:0003128,6.98e-10,2;UBERON:0001694,6.98e-10,2;UBERON:0004681,6.98e-10,2;UBERON:0001839,6.98e-10,2;UBERON:0001690,6.98e-10,2;UBERON:0001844,6.98e-10,2;UBERON:0001849,6.98e-10,2;UBERON:0002499,6.98e-10,2;UBERON:0001855,6.98e-10,2;UBERON:0011137,6.98e-10,2;UBERON:0001703,6.98e-10,2;UBERON:0010323,6.98e-10,2;UBERON:0003129,6.98e-10,2;UBERON:0003069,6.98e-10,2;UBERON:0003051,6.98e-10,2;UBERON:0004637,6.98e-10,2;UBERON:0004761,6.98e-10,2;UBERON:0010113,6.98e-10,2;UBERON:0009123,6.98e-10,2;UBERON:0010351,6.98e-10,2;UBERON:0009617,6.98e-10,2;UBERON:0005641,6.98e-10,2;UBERON:0010349,6.98e-10,2;UBERON:0001896,7.70e-10,2;UBERON:0002298,7.70e-10,2;UBERON:0005290,7.70e-10,2;UBERON:0010096,7.70e-10,2;UBERON:0002950,9.76e-10,4;UBERON:0001891,9.76e-10,4;UBERON:0009616,9.76e-10,4;UBERON:0010286,9.76e-10,4;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0003080,1.80e-08,40;UBERON:0010314,1.64e-07,92;UBERON:0002780,5.58e-07,39;UBERON:0001890,5.58e-07,39;UBERON:0006240,5.58e-07,39|phase1_expression=4.00372117761985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.662605622854841,0.61245399607477,0.383381884072945,0,2.20231761998777,2.042997409363,1.99688493233117,0.527545150920775,0.640413505216868,1.04182674111352,0.837548997004143,1.12552522006336,2.29197371665215,0.589257170947335,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,3.94361575374705,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,2.39665023047716,0.457500602818626,0.502617408451458,1.04294592115366,1.27857728665165,2.90903262383384,3.56930778749067,0,0,0,0,0.390361328888111,0,0,0,0.272145996605311,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0.804820204198858,0.233530684734339,0.658239399653922,0,0.0810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| ||
|EntrezGene=18578 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q8VBU5 | |||
|association_with_transcript=0bp_to_NM_019840_5end | |||
|description=CAGE_peak_19_at_Pde4b_5end | |||
|id=chr4:101927538..101927548,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.01e-11!23;CL:0000337!9.01e-11!23;CL:0000540!1.16e-10!33;CL:0000047!1.16e-10!33;CL:0000031!1.16e-10!33;CL:0000404!1.16e-10!33;CL:0000221!2.86e-08!44;CL:0000133!2.86e-08!44;CL:0000393!1.09e-07!39;CL:0000211!1.09e-07!39;CL:0002319!1.28e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.17e-13,3;CL:0000197,6.98e-10,2;CL:0002491,6.98e-10,2;CL:0000098,6.98e-10,2;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0000221,1.27e-07,44;CL:0000133,1.27e-07,44;CL:0000393,5.27e-07,39;CL:0000211,5.27e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.59e-23!73;UBERON:0005743!5.59e-23!73;UBERON:0000073!8.42e-22!75;UBERON:0001016!8.42e-22!75;UBERON:0000033!5.67e-21!63;UBERON:0001049!4.53e-20!52;UBERON:0005068!4.53e-20!52;UBERON:0006241!4.53e-20!52;UBERON:0007135!4.53e-20!52;UBERON:0000955!2.43e-19!50;UBERON:0006238!2.43e-19!50;UBERON:0002616!1.66e-18!49;UBERON:0004121!3.22e-17!102;UBERON:0000924!3.22e-17!102;UBERON:0006601!3.22e-17!102;UBERON:0002346!2.06e-15!71;UBERON:0003075!2.06e-15!71;UBERON:0007284!2.06e-15!71;UBERON:0003080!3.18e-14!40;UBERON:0003056!4.49e-14!49;UBERON:0002780!2.07e-13!39;UBERON:0001890!2.07e-13!39;UBERON:0006240!2.07e-13!39;UBERON:0002020!3.39e-13!34;UBERON:0007811!3.31e-12!86;UBERON:0000153!2.96e-10!94;UBERON:0002791!3.15e-10!29;UBERON:0003528!3.15e-10!29;UBERON:0001893!3.15e-10!29;UBERON:0004111!1.77e-09!122;UBERON:0000025!4.08e-09!114;UBERON:0002420!5.51e-07!8;UBERON:0007245!5.51e-07!8;UBERON:0010009!5.51e-07!8;UBERON:0010011!5.51e-07!8;UBERON:0000454!5.51e-07!8;UBERON:0002298!8.07e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.89e-19,73;UBERON:0001016,1.15e-18,75;UBERON:0004121,7.17e-16,95;UBERON:0000924,7.17e-16,95;UBERON:0006601,7.17e-16,95;UBERON:0000073,1.92e-14,54;UBERON:0004684,6.17e-13,3;UBERON:0002275,6.17e-13,3;UBERON:0000955,2.03e-12,47;UBERON:0006238,2.03e-12,47;UBERON:0001049,4.40e-11,52;UBERON:0005068,4.40e-11,52;UBERON:0006241,4.40e-11,52;UBERON:0007135,4.40e-11,52;UBERON:0002616,9.57e-11,46;UBERON:0010371,3.61e-10,73;UBERON:0004766,6.98e-10,2;UBERON:0008193,6.98e-10,2;UBERON:0005913,6.98e-10,2;UBERON:0011158,6.98e-10,2;UBERON:0005744,6.98e-10,2;UBERON:0003457,6.98e-10,2;UBERON:0008001,6.98e-10,2;UBERON:0007497,6.98e-10,2;UBERON:0009955,6.98e-10,2;UBERON:0003067,6.98e-10,2;UBERON:0002546,6.98e-10,2;UBERON:0007914,6.98e-10,2;UBERON:0005253,6.98e-10,2;UBERON:0002227,6.98e-10,2;UBERON:0001846,6.98e-10,2;UBERON:0004339,6.98e-10,2;UBERON:0002105,6.98e-10,2;UBERON:0001678,6.98e-10,2;UBERON:0003128,6.98e-10,2;UBERON:0001694,6.98e-10,2;UBERON:0004681,6.98e-10,2;UBERON:0001839,6.98e-10,2;UBERON:0001690,6.98e-10,2;UBERON:0001844,6.98e-10,2;UBERON:0001849,6.98e-10,2;UBERON:0002499,6.98e-10,2;UBERON:0001855,6.98e-10,2;UBERON:0011137,6.98e-10,2;UBERON:0001703,6.98e-10,2;UBERON:0010323,6.98e-10,2;UBERON:0003129,6.98e-10,2;UBERON:0003069,6.98e-10,2;UBERON:0003051,6.98e-10,2;UBERON:0004637,6.98e-10,2;UBERON:0004761,6.98e-10,2;UBERON:0010113,6.98e-10,2;UBERON:0009123,6.98e-10,2;UBERON:0010351,6.98e-10,2;UBERON:0009617,6.98e-10,2;UBERON:0005641,6.98e-10,2;UBERON:0010349,6.98e-10,2;UBERON:0001896,7.70e-10,2;UBERON:0002298,7.70e-10,2;UBERON:0005290,7.70e-10,2;UBERON:0010096,7.70e-10,2;UBERON:0002950,9.76e-10,4;UBERON:0001891,9.76e-10,4;UBERON:0009616,9.76e-10,4;UBERON:0010286,9.76e-10,4;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0003080,1.80e-08,40;UBERON:0010314,1.64e-07,92;UBERON:0002780,5.58e-07,39;UBERON:0001890,5.58e-07,39;UBERON:0006240,5.58e-07,39 | |||
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.662605622854841,0.61245399607477,0.383381884072945,0,2.20231761998777,2.042997409363,1.99688493233117,0.527545150920775,0.640413505216868,1.04182674111352,0.837548997004143,1.12552522006336,2.29197371665215,0.589257170947335,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,3.94361575374705,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,2.39665023047716,0.457500602818626,0.502617408451458,1.04294592115366,1.27857728665165,2.90903262383384,3.56930778749067,0,0,0,0,0.390361328888111,0,0,0,0.272145996605311,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0.804820204198858,0.233530684734339,0.658239399653922,0,0.0810688095458557,0,0,0.134206418760372,1.89260953707715,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0.275936746304732,4.0137647496948,3.39913891117389,0,0,0,0,0.215423397732799,0.716906393857656,1.11399337041197,1.13230612315533,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,1.3748254587495,1.37016503954128,0,0.675022500231806,0.900642406448441,0.453142408984205,0,0.207574695168353,0.399024873401031,0,0.243106717068294,0.419226325255965,0,0,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.145346416632329,0.188218760830661,0.423073039458382,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.499621155875892,0.701794825336225,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p19@Pde4b | |||
}} |
Revision as of 03:15, 14 September 2013
Short description: | p19@Pde4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Pde4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_NM_019840_5end |
EntrezGene: | Pde4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.17e-13 | 3 |
receptor cell | 6.98e-10 | 2 |
auditory epithelial cell | 6.98e-10 | 2 |
sensory epithelial cell | 6.98e-10 | 2 |
neuron | 1.62e-08 | 33 |
neuronal stem cell | 1.62e-08 | 33 |
neuroblast | 1.62e-08 | 33 |
electrically signaling cell | 1.62e-08 | 33 |
ectodermal cell | 1.27e-07 | 44 |
neurectodermal cell | 1.27e-07 | 44 |
electrically responsive cell | 5.27e-07 | 39 |
electrically active cell | 5.27e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.