FFCP PHASE1:Mm9::chr4:101927704..101927726,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18578|HGNC=|MCL_coexpression_id=19|UniProt=Q8VBU5|association_with_transcript=96bp_to_ENSMUST00000106908_5end|description=CAGE_peak_11_at_Pde4b_5end|id=chr4:101927704..101927726,+|ontology_enrichment_celltype=CL:0000540!8.85e-09!33;CL:0000047!8.85e-09!33;CL:0000031!8.85e-09!33;CL:0000404!8.85e-09!33;CL:0000393!7.62e-07!39;CL:0000211!7.62e-07!39;CL:0000117!9.29e-07!23;CL:0000337!9.29e-07!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.91e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.01e-13!122;UBERON:0000025!3.64e-13!114;UBERON:0007100!1.43e-12!18;UBERON:0000948!1.43e-12!18;UBERON:0005498!1.43e-12!18;UBERON:0004140!1.43e-12!18;UBERON:0009881!1.43e-12!18;UBERON:0004141!1.43e-12!18;UBERON:0003084!1.43e-12!18;UBERON:0007005!1.43e-12!18;UBERON:0004139!1.43e-12!18;UBERON:0004291!1.43e-12!18;UBERON:0001017!1.45e-11!73;UBERON:0005743!1.45e-11!73;UBERON:0000073!2.48e-11!75;UBERON:0001016!2.48e-11!75;UBERON:0000033!3.13e-10!63;UBERON:0000955!4.02e-10!50;UBERON:0006238!4.02e-10!50;UBERON:0002616!9.43e-10!49;UBERON:0004535!1.40e-09!23;UBERON:0001009!1.40e-09!23;UBERON:0001049!5.17e-09!52;UBERON:0005068!5.17e-09!52;UBERON:0006241!5.17e-09!52;UBERON:0007135!5.17e-09!52;UBERON:0000477!1.59e-08!154;UBERON:0002020!2.28e-08!34;UBERON:0004121!3.14e-08!102;UBERON:0000924!3.14e-08!102;UBERON:0006601!3.14e-08!102;UBERON:0002791!4.34e-08!29;UBERON:0003528!4.34e-08!29;UBERON:0001893!4.34e-08!29;UBERON:0003080!5.85e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.43e-39,18;UBERON:0000948,5.43e-39,18;UBERON:0005498,5.43e-39,18;UBERON:0004140,5.43e-39,18;UBERON:0009881,5.43e-39,18;UBERON:0004141,5.43e-39,18;UBERON:0003084,5.43e-39,18;UBERON:0007005,5.43e-39,18;UBERON:0004139,5.43e-39,18;UBERON:0004291,5.43e-39,18;UBERON:0004535,8.01e-30,23;UBERON:0001009,8.01e-30,23;UBERON:0004872,8.18e-20,33;UBERON:0010314,6.08e-17,92;UBERON:0003103,1.55e-16,43;UBERON:0003914,5.90e-13,47;UBERON:0000025,9.79e-13,114;UBERON:0004111,1.40e-11,122;UBERON:0004684,1.91e-09,3;UBERON:0002275,1.91e-09,3;UBERON:0001896,5.30e-07,2;UBERON:0002298,5.30e-07,2;UBERON:0005290,5.30e-07,2;UBERON:0010096,5.30e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.210324961351382,0,0,0.244981598429908,0.191690942036473,0,3.30347642998166,1.53224805702225,1.53606533256243,0.527545150920775,0.274462930807229,0.52091337055676,0.558365998002762,0.56276261003168,2.75036845998258,0.883885756421003,0.284743361598206,0.372798891650601,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.3481157546434,1.83000241127451,0.251308704225729,0.695297280769106,0.767146371990992,1.66230435647648,0.324482526135515,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0.556094498451196,0,0,0,0,0,0,3.10688658803253,4.22146907965973,4.14142741360334,4.02466050494857,6.68998387941173,6.63348585415727,10.4640275137684,8.58474884478781,5.48797109125697,8.22799249567402,8.86504306027114,6.32336714457675,8.33339928324394,5.26920276698522,4.16039898157152,1.26173969138476,0.308713837137853,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,1.8542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0.685082519770642,0,0,1.35096360967266,1.35942722695261,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,1.76888048234658,0,0.377252682772152,0.187283014939765,0.640251524048693,0.459483751644906,0,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.282328141245992,0,0,0.263069711437843,0.543216455383447,0,0.118635018124174,0.29551344712669,0.818462086339379,0.309873682371932,0,0,0.467863216890817,0.644613162144895,0.191288332068843,0.220591419119515,0|short_description=p11@Pde4b}} | ||
|EntrezGene=18578 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=Q8VBU5 | |||
|association_with_transcript=96bp_to_ENSMUST00000106908_5end | |||
|description=CAGE_peak_11_at_Pde4b_5end | |||
|id=chr4:101927704..101927726,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.85e-09!33;CL:0000047!8.85e-09!33;CL:0000031!8.85e-09!33;CL:0000404!8.85e-09!33;CL:0000393!7.62e-07!39;CL:0000211!7.62e-07!39;CL:0000117!9.29e-07!23;CL:0000337!9.29e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.91e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.01e-13!122;UBERON:0000025!3.64e-13!114;UBERON:0007100!1.43e-12!18;UBERON:0000948!1.43e-12!18;UBERON:0005498!1.43e-12!18;UBERON:0004140!1.43e-12!18;UBERON:0009881!1.43e-12!18;UBERON:0004141!1.43e-12!18;UBERON:0003084!1.43e-12!18;UBERON:0007005!1.43e-12!18;UBERON:0004139!1.43e-12!18;UBERON:0004291!1.43e-12!18;UBERON:0001017!1.45e-11!73;UBERON:0005743!1.45e-11!73;UBERON:0000073!2.48e-11!75;UBERON:0001016!2.48e-11!75;UBERON:0000033!3.13e-10!63;UBERON:0000955!4.02e-10!50;UBERON:0006238!4.02e-10!50;UBERON:0002616!9.43e-10!49;UBERON:0004535!1.40e-09!23;UBERON:0001009!1.40e-09!23;UBERON:0001049!5.17e-09!52;UBERON:0005068!5.17e-09!52;UBERON:0006241!5.17e-09!52;UBERON:0007135!5.17e-09!52;UBERON:0000477!1.59e-08!154;UBERON:0002020!2.28e-08!34;UBERON:0004121!3.14e-08!102;UBERON:0000924!3.14e-08!102;UBERON:0006601!3.14e-08!102;UBERON:0002791!4.34e-08!29;UBERON:0003528!4.34e-08!29;UBERON:0001893!4.34e-08!29;UBERON:0003080!5.85e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.43e-39,18;UBERON:0000948,5.43e-39,18;UBERON:0005498,5.43e-39,18;UBERON:0004140,5.43e-39,18;UBERON:0009881,5.43e-39,18;UBERON:0004141,5.43e-39,18;UBERON:0003084,5.43e-39,18;UBERON:0007005,5.43e-39,18;UBERON:0004139,5.43e-39,18;UBERON:0004291,5.43e-39,18;UBERON:0004535,8.01e-30,23;UBERON:0001009,8.01e-30,23;UBERON:0004872,8.18e-20,33;UBERON:0010314,6.08e-17,92;UBERON:0003103,1.55e-16,43;UBERON:0003914,5.90e-13,47;UBERON:0000025,9.79e-13,114;UBERON:0004111,1.40e-11,122;UBERON:0004684,1.91e-09,3;UBERON:0002275,1.91e-09,3;UBERON:0001896,5.30e-07,2;UBERON:0002298,5.30e-07,2;UBERON:0005290,5.30e-07,2;UBERON:0010096,5.30e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.210324961351382,0,0,0.244981598429908,0.191690942036473,0,3.30347642998166,1.53224805702225,1.53606533256243,0.527545150920775,0.274462930807229,0.52091337055676,0.558365998002762,0.56276261003168,2.75036845998258,0.883885756421003,0.284743361598206,0.372798891650601,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.3481157546434,1.83000241127451,0.251308704225729,0.695297280769106,0.767146371990992,1.66230435647648,0.324482526135515,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0.556094498451196,0,0,0,0,0,0,3.10688658803253,4.22146907965973,4.14142741360334,4.02466050494857,6.68998387941173,6.63348585415727,10.4640275137684,8.58474884478781,5.48797109125697,8.22799249567402,8.86504306027114,6.32336714457675,8.33339928324394,5.26920276698522,4.16039898157152,1.26173969138476,0.308713837137853,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0.631016438832513,0,0.430846795465598,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,1.8542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0.685082519770642,0,0,1.35096360967266,1.35942722695261,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,1.76888048234658,0,0.377252682772152,0.187283014939765,0.640251524048693,0.459483751644906,0,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.282328141245992,0,0,0.263069711437843,0.543216455383447,0,0.118635018124174,0.29551344712669,0.818462086339379,0.309873682371932,0,0,0.467863216890817,0.644613162144895,0.191288332068843,0.220591419119515,0 | |||
|short_description=p11@Pde4b | |||
}} |
Revision as of 03:15, 14 September 2013
Short description: | p11@Pde4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Pde4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 96bp_to_ENSMUST00000106908_5end |
EntrezGene: | Pde4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.91e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.43e-39 | 18 |
heart | 5.43e-39 | 18 |
primitive heart tube | 5.43e-39 | 18 |
primary heart field | 5.43e-39 | 18 |
anterior lateral plate mesoderm | 5.43e-39 | 18 |
heart tube | 5.43e-39 | 18 |
heart primordium | 5.43e-39 | 18 |
cardiac mesoderm | 5.43e-39 | 18 |
cardiogenic plate | 5.43e-39 | 18 |
heart rudiment | 5.43e-39 | 18 |
cardiovascular system | 8.01e-30 | 23 |
circulatory system | 8.01e-30 | 23 |
splanchnic layer of lateral plate mesoderm | 8.18e-20 | 33 |
structure with developmental contribution from neural crest | 6.08e-17 | 92 |
compound organ | 1.55e-16 | 43 |
epithelial tube | 5.90e-13 | 47 |
tube | 9.79e-13 | 114 |
anatomical conduit | 1.40e-11 | 122 |
raphe nuclei | 1.91e-09 | 3 |
reticular formation | 1.91e-09 | 3 |
medulla oblongata | 5.30e-07 | 2 |
brainstem | 5.30e-07 | 2 |
myelencephalon | 5.30e-07 | 2 |
future myelencephalon | 5.30e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.