FFCP PHASE1:Mm9::chr4:111678886..111678902,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=639781|HGNC=|MCL_coexpression_id=198|UniProt=|association_with_transcript=0bp_to_ENSMUST00000143802_5end|description=CAGE_peak_2_at_Skint1_5end|id=chr4:111678886..111678902,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.48e-23!23;UBERON:0000974!1.48e-23!23;UBERON:0004807!1.48e-23!23;UBERON:0005058!1.48e-23!23;UBERON:0003351!1.48e-23!23;UBERON:0009113!1.48e-23!23;UBERON:0003295!1.48e-23!23;UBERON:0009722!1.48e-23!23;UBERON:0005562!1.48e-23!23;UBERON:0007690!1.48e-23!23;UBERON:0006562!1.89e-22!24;UBERON:0003408!1.89e-22!24;UBERON:0001557!1.89e-22!24;UBERON:0001042!1.89e-22!24;UBERON:0008814!1.89e-22!24;UBERON:0009145!1.89e-22!24;UBERON:0000072!1.25e-19!27;UBERON:0004177!4.50e-18!29;UBERON:0000014!5.05e-17!5;UBERON:0001003!5.05e-17!5;UBERON:0002097!5.05e-17!5;UBERON:0002199!5.05e-17!5;UBERON:0007029!5.05e-17!5;UBERON:0007376!5.05e-17!5;UBERON:0002416!5.05e-17!5;UBERON:0007383!5.05e-17!5;UBERON:0000063!1.80e-14!35;UBERON:0000065!6.31e-12!41;UBERON:0001004!1.42e-11!42;UBERON:0002390!1.31e-10!45;UBERON:0003061!1.31e-10!45;UBERON:0002193!9.14e-10!48;UBERON:0005057!5.06e-09!51;UBERON:0000064!1.36e-08!99;UBERON:0003929!3.69e-08!55;UBERON:0002368!3.03e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.15e-41,5;UBERON:0001003,4.15e-41,5;UBERON:0002097,4.15e-41,5;UBERON:0002199,4.15e-41,5;UBERON:0007029,4.15e-41,5;UBERON:0007376,4.15e-41,5;UBERON:0002416,4.15e-41,5;UBERON:0007383,4.15e-41,5;UBERON:0003102,3.60e-13,22;UBERON:0002370,1.33e-08,23;UBERON:0000974,1.33e-08,23;UBERON:0004807,1.33e-08,23;UBERON:0005058,1.33e-08,23;UBERON:0003351,1.33e-08,23;UBERON:0009113,1.33e-08,23;UBERON:0003295,1.33e-08,23;UBERON:0009722,1.33e-08,23;UBERON:0005562,1.33e-08,23;UBERON:0007690,1.33e-08,23;UBERON:0006562,3.03e-08,24;UBERON:0003408,3.03e-08,24;UBERON:0001557,3.03e-08,24;UBERON:0001042,3.03e-08,24;UBERON:0008814,3.03e-08,24;UBERON:0009145,3.03e-08,24;UBERON:0000072,2.50e-07,27;UBERON:0004177,8.02e-07,29;UBERON:0005057,8.02e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26567761177624,5.32832608096488,4.34253059482722,3.58117032009409,3.28281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,1.1298205288131,1.16928740680016,0.716106782669926,0.993406773906324,1.44234539423963,1.18151621739662,0.605798699688886,0.838274873204998,0.907435666231565,1.26695244961678,0.865906574762965,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0|short_description=p2@Skint1}} | ||
|EntrezGene=639781 | |||
|HGNC= | |||
|MCL_coexpression_id=198 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000143802_5end | |||
|description=CAGE_peak_2_at_Skint1_5end | |||
|id=chr4:111678886..111678902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.48e-23!23;UBERON:0000974!1.48e-23!23;UBERON:0004807!1.48e-23!23;UBERON:0005058!1.48e-23!23;UBERON:0003351!1.48e-23!23;UBERON:0009113!1.48e-23!23;UBERON:0003295!1.48e-23!23;UBERON:0009722!1.48e-23!23;UBERON:0005562!1.48e-23!23;UBERON:0007690!1.48e-23!23;UBERON:0006562!1.89e-22!24;UBERON:0003408!1.89e-22!24;UBERON:0001557!1.89e-22!24;UBERON:0001042!1.89e-22!24;UBERON:0008814!1.89e-22!24;UBERON:0009145!1.89e-22!24;UBERON:0000072!1.25e-19!27;UBERON:0004177!4.50e-18!29;UBERON:0000014!5.05e-17!5;UBERON:0001003!5.05e-17!5;UBERON:0002097!5.05e-17!5;UBERON:0002199!5.05e-17!5;UBERON:0007029!5.05e-17!5;UBERON:0007376!5.05e-17!5;UBERON:0002416!5.05e-17!5;UBERON:0007383!5.05e-17!5;UBERON:0000063!1.80e-14!35;UBERON:0000065!6.31e-12!41;UBERON:0001004!1.42e-11!42;UBERON:0002390!1.31e-10!45;UBERON:0003061!1.31e-10!45;UBERON:0002193!9.14e-10!48;UBERON:0005057!5.06e-09!51;UBERON:0000064!1.36e-08!99;UBERON:0003929!3.69e-08!55;UBERON:0002368!3.03e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.15e-41,5;UBERON:0001003,4.15e-41,5;UBERON:0002097,4.15e-41,5;UBERON:0002199,4.15e-41,5;UBERON:0007029,4.15e-41,5;UBERON:0007376,4.15e-41,5;UBERON:0002416,4.15e-41,5;UBERON:0007383,4.15e-41,5;UBERON:0003102,3.60e-13,22;UBERON:0002370,1.33e-08,23;UBERON:0000974,1.33e-08,23;UBERON:0004807,1.33e-08,23;UBERON:0005058,1.33e-08,23;UBERON:0003351,1.33e-08,23;UBERON:0009113,1.33e-08,23;UBERON:0003295,1.33e-08,23;UBERON:0009722,1.33e-08,23;UBERON:0005562,1.33e-08,23;UBERON:0007690,1.33e-08,23;UBERON:0006562,3.03e-08,24;UBERON:0003408,3.03e-08,24;UBERON:0001557,3.03e-08,24;UBERON:0001042,3.03e-08,24;UBERON:0008814,3.03e-08,24;UBERON:0009145,3.03e-08,24;UBERON:0000072,2.50e-07,27;UBERON:0004177,8.02e-07,29;UBERON:0005057,8.02e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26567761177624,5.32832608096488,4.34253059482722,3.58117032009409,3.28281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,1.1298205288131,1.16928740680016,0.716106782669926,0.993406773906324,1.44234539423963,1.18151621739662,0.605798699688886,0.838274873204998,0.907435666231565,1.26695244961678,0.865906574762965,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |||
|short_description=p2@Skint1 | |||
}} |
Revision as of 03:27, 14 September 2013
Short description: | p2@Skint1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Skint1_5end |
Coexpression cluster: | MCL_coexpression_mm9:198 |
Association with transcript: | 0bp_to_ENSMUST00000143802_5end |
EntrezGene: | Skint1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 4.15e-41 | 5 |
skin epidermis | 4.15e-41 | 5 |
skin of body | 4.15e-41 | 5 |
integument | 4.15e-41 | 5 |
surface | 4.15e-41 | 5 |
outer epithelium | 4.15e-41 | 5 |
integumental system | 4.15e-41 | 5 |
enveloping layer of ectoderm | 4.15e-41 | 5 |
surface structure | 3.60e-13 | 22 |
thymus | 1.33e-08 | 23 |
neck | 1.33e-08 | 23 |
respiratory system epithelium | 1.33e-08 | 23 |
hemolymphoid system gland | 1.33e-08 | 23 |
pharyngeal epithelium | 1.33e-08 | 23 |
thymic region | 1.33e-08 | 23 |
pharyngeal gland | 1.33e-08 | 23 |
entire pharyngeal arch endoderm | 1.33e-08 | 23 |
thymus primordium | 1.33e-08 | 23 |
early pharyngeal endoderm | 1.33e-08 | 23 |
pharynx | 3.03e-08 | 24 |
gland of gut | 3.03e-08 | 24 |
upper respiratory tract | 3.03e-08 | 24 |
chordate pharynx | 3.03e-08 | 24 |
pharyngeal arch system | 3.03e-08 | 24 |
pharyngeal region of foregut | 3.03e-08 | 24 |
segment of respiratory tract | 2.50e-07 | 27 |
hemopoietic organ | 8.02e-07 | 29 |
immune organ | 8.02e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.