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FFCP PHASE1:Mm9::chr4:130469179..130469263,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16792|HGNC=|MCL_coexpression_id=316|UniProt=Q61168,B1ASF7,Q544S4|association_with_transcript=0bp_to_ENSMUST00000116245,ENSMUST00000136082,ENSMUST00000139023,ENSMUST00000156170,ENSMUST00000156225,NM_010686,uc008uzu.1,uc008uzv.1,uc012dlx.1,uc012dly.1_5end|description=CAGE_peak_1_at_Laptm5_5end|id=chr4:130469179..130469263,+|ontology_enrichment_celltype=CL:0000988!1.30e-10!32;CL:0002032!1.30e-10!32;CL:0000037!1.30e-10!32;CL:0000566!1.30e-10!32;CL:0000837!1.30e-10!32;CL:0000738!5.02e-09!17;CL:0002087!5.02e-09!17;CL:0002031!2.12e-08!25;CL:0000838!2.77e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,9.93e-11,32;CL:0002032,9.93e-11,32;CL:0000037,9.93e-11,32;CL:0000837,9.93e-11,32;CL:0000738,4.96e-09,17;CL:0002087,4.96e-09,17;CL:0002031,1.63e-08,25;CL:0000838,2.75e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.82e-19!48;UBERON:0002405!5.18e-18!70;UBERON:0002390!1.92e-17!45;UBERON:0003061!1.92e-17!45;UBERON:0002371!9.29e-10!16;UBERON:0003081!4.73e-09!88;UBERON:0004177!5.81e-09!29;UBERON:0001474!6.88e-09!22;UBERON:0004765!6.88e-09!22;UBERON:0001434!6.88e-09!22;UBERON:0005057!1.06e-08!51;UBERON:0001041!1.13e-07!92;UBERON:0000077!1.30e-07!97;UBERON:0000926!1.98e-07!193;UBERON:0004120!1.98e-07!193;UBERON:0006603!1.98e-07!193;UBERON:0003408!6.39e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.21e-19,48;UBERON:0002405,4.21e-19,48;UBERON:0002390,1.40e-17,45;UBERON:0003061,1.40e-17,45;UBERON:0002371,9.16e-10,16;UBERON:0004177,4.50e-09,29;UBERON:0005057,4.50e-09,29;UBERON:0001474,8.10e-09,22;UBERON:0004765,8.10e-09,22;UBERON:0001434,8.10e-09,22;UBERON:0003081,1.00e-08,87;UBERON:0000077,1.29e-07,35;UBERON:0001041,1.60e-07,80;UBERON:0003408,5.04e-07,24;UBERON:0002370,9.02e-07,23;UBERON:0000974,9.02e-07,23;UBERON:0004807,9.02e-07,23;UBERON:0005058,9.02e-07,23;UBERON:0003351,9.02e-07,23;UBERON:0009113,9.02e-07,23;UBERON:0003295,9.02e-07,23;UBERON:0009722,9.02e-07,23;UBERON:0005562,9.02e-07,23;UBERON:0007690,9.02e-07,23|phase1_expression=13.2923543096979,0.348975407639361,0,0.30246421130683,0,0,0.467225281191051,1124.2767772058,441.091066501172,418.741437590046,142.45334956362,111.36193395749,1129.75361681603,1235.33770658285,173.883295667776,227.582200546164,115.427709891144,750.169029221889,707.921820706429,566.56018515037,81.9817317056313,598.227980985334,441.68884343394,235.188861506308,198.668437404169,0.57423196411502,0.430761996159075,0.861884930743556,17.4821545899864,24.4469225867133,18.8470934057009,0,0,0,0,0.831173226792462,0,1356.04248358758,761.801960910705,1040.76520301991,1340.57956122268,1288.90683011659,1202.12363410514,0,0,0,40.684349906098,0.436050312760893,0.659058548203415,1.74986909166855,5.45947044338914,2.87505128729943,937.401420044573,969.809183869167,1154.81829385351,13.6347501099052,28.0802771139982,31.455997628924,14.3644687210314,12.6957835025288,10.775133859605,0.338844532069132,0,3322.42975620293,4107.75087010321,3575.84641852372,1201.09684306828,958.624671777279,11.9243054154749,10.9354810048669,10.7265730289205,27.1368435183613,29.3755159465646,8.69684674426174,10.6388472830242,7.35375029288017,34.1359231098105,41.498384877686,36.7119614482422,10.0233578674947,10.7955419450843,10.4182674111352,39.6439858581961,34.3285192119325,39.421947926417,30.0521157183141,32.1759998605973,13.047961207771,24.3838342532853,6.87701196971748,6.37701875143691,44.7420416030321,0.679971333707751,1.07940638327563,13.6453047664011,4.48026887097336,119.939534792516,0,0,0,0.704217098883403,0,0,0,5.84525810730278,2.53359865475099,4.04419556011827,77.6450382089608,2128.2104656961,187.482421638874,31.921300124969,37.1447883540812,35.0535555829209,27.2807979400247,43.8605877616179,34.8096457983201,19.5284024510155,174.531423802333,666.996356170205,108.869090014606,212.891223795819,197.829103279171,44.7340226923493,14.6390398505774,15.7085030110091,82.7680858875836,607.34286612051,398.335413379623,643.991910806292,46.435098215495,64.5075849974263,8.67015029578764,60.1432147865277,43.4716277461562,56.1027720310812,42.6694521868203,59.4741884885847,261.876673134246,36.1393544560155,50.7164872686402,16.9156575851515,11.2652031172402,16.2055916824814,23.0578371288644,14.2196283226275,20.2419678050063,15.3670828277955,16.298312356558,14.4430555265004,16.2631228944325,18.6508191613786,30.0298153425778,35.0339534024253,65.1231551396451,65.644501514134,17.7140497468459,429.7544706357,442.895748144425,496.4336334441,15.1201813950916,11.7263029990548,17.4660199617184,26.7521551211288,27.1534639811417,20.0547246753592,16.509910077279,12.0723030629829,23.9368951852697,21.228220638839,35.1318373129264,41.9936433447533,41.6669964162197,102.969004071503,70.7267826867159,60.3532152379045,24.6971069710283,96.482284631269,34.3785736662608,25.5945900642281,19.5078804362768,33.8921423277105,28.235693447268,29.5762798313678,33.2894845696978,48.4019642775402,30.469306623942,38.7056221552415,50.7339003704935,49.5208781282565,49.4350674759822,40.6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|EntrezGene=16792
|HGNC=
|MCL_coexpression_id=316
|UniProt=Q61168,B1ASF7,Q544S4
|association_with_transcript=0bp_to_ENSMUST00000116245,ENSMUST00000136082,ENSMUST00000139023,ENSMUST00000156170,ENSMUST00000156225,NM_010686,uc008uzu.1,uc008uzv.1,uc012dlx.1,uc012dly.1_5end
|description=CAGE_peak_1_at_Laptm5_5end
|id=chr4:130469179..130469263,+
|ontology_enrichment_celltype=CL:0000988!1.30e-10!32;CL:0002032!1.30e-10!32;CL:0000037!1.30e-10!32;CL:0000566!1.30e-10!32;CL:0000837!1.30e-10!32;CL:0000738!5.02e-09!17;CL:0002087!5.02e-09!17;CL:0002031!2.12e-08!25;CL:0000838!2.77e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000988,9.93e-11,32;CL:0002032,9.93e-11,32;CL:0000037,9.93e-11,32;CL:0000837,9.93e-11,32;CL:0000738,4.96e-09,17;CL:0002087,4.96e-09,17;CL:0002031,1.63e-08,25;CL:0000838,2.75e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!5.82e-19!48;UBERON:0002405!5.18e-18!70;UBERON:0002390!1.92e-17!45;UBERON:0003061!1.92e-17!45;UBERON:0002371!9.29e-10!16;UBERON:0003081!4.73e-09!88;UBERON:0004177!5.81e-09!29;UBERON:0001474!6.88e-09!22;UBERON:0004765!6.88e-09!22;UBERON:0001434!6.88e-09!22;UBERON:0005057!1.06e-08!51;UBERON:0001041!1.13e-07!92;UBERON:0000077!1.30e-07!97;UBERON:0000926!1.98e-07!193;UBERON:0004120!1.98e-07!193;UBERON:0006603!1.98e-07!193;UBERON:0003408!6.39e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.21e-19,48;UBERON:0002405,4.21e-19,48;UBERON:0002390,1.40e-17,45;UBERON:0003061,1.40e-17,45;UBERON:0002371,9.16e-10,16;UBERON:0004177,4.50e-09,29;UBERON:0005057,4.50e-09,29;UBERON:0001474,8.10e-09,22;UBERON:0004765,8.10e-09,22;UBERON:0001434,8.10e-09,22;UBERON:0003081,1.00e-08,87;UBERON:0000077,1.29e-07,35;UBERON:0001041,1.60e-07,80;UBERON:0003408,5.04e-07,24;UBERON:0002370,9.02e-07,23;UBERON:0000974,9.02e-07,23;UBERON:0004807,9.02e-07,23;UBERON:0005058,9.02e-07,23;UBERON:0003351,9.02e-07,23;UBERON:0009113,9.02e-07,23;UBERON:0003295,9.02e-07,23;UBERON:0009722,9.02e-07,23;UBERON:0005562,9.02e-07,23;UBERON:0007690,9.02e-07,23
|phase1_expression=13.2923543096979,0.348975407639361,0,0.30246421130683,0,0,0.467225281191051,1124.2767772058,441.091066501172,418.741437590046,142.45334956362,111.36193395749,1129.75361681603,1235.33770658285,173.883295667776,227.582200546164,115.427709891144,750.169029221889,707.921820706429,566.56018515037,81.9817317056313,598.227980985334,441.68884343394,235.188861506308,198.668437404169,0.57423196411502,0.430761996159075,0.861884930743556,17.4821545899864,24.4469225867133,18.8470934057009,0,0,0,0,0.831173226792462,0,1356.04248358758,761.801960910705,1040.76520301991,1340.57956122268,1288.90683011659,1202.12363410514,0,0,0,40.684349906098,0.436050312760893,0.659058548203415,1.74986909166855,5.45947044338914,2.87505128729943,937.401420044573,969.809183869167,1154.81829385351,13.6347501099052,28.0802771139982,31.455997628924,14.3644687210314,12.6957835025288,10.775133859605,0.338844532069132,0,3322.42975620293,4107.75087010321,3575.84641852372,1201.09684306828,958.624671777279,11.9243054154749,10.9354810048669,10.7265730289205,27.1368435183613,29.3755159465646,8.69684674426174,10.6388472830242,7.35375029288017,34.1359231098105,41.498384877686,36.7119614482422,10.0233578674947,10.7955419450843,10.4182674111352,39.6439858581961,34.3285192119325,39.421947926417,30.0521157183141,32.1759998605973,13.047961207771,24.3838342532853,6.87701196971748,6.37701875143691,44.7420416030321,0.679971333707751,1.07940638327563,13.6453047664011,4.48026887097336,119.939534792516,0,0,0,0.704217098883403,0,0,0,5.84525810730278,2.53359865475099,4.04419556011827,77.6450382089608,2128.2104656961,187.482421638874,31.921300124969,37.1447883540812,35.0535555829209,27.2807979400247,43.8605877616179,34.8096457983201,19.5284024510155,174.531423802333,666.996356170205,108.869090014606,212.891223795819,197.829103279171,44.7340226923493,14.6390398505774,15.7085030110091,82.7680858875836,607.34286612051,398.335413379623,643.991910806292,46.435098215495,64.5075849974263,8.67015029578764,60.1432147865277,43.4716277461562,56.1027720310812,42.6694521868203,59.4741884885847,261.876673134246,36.1393544560155,50.7164872686402,16.9156575851515,11.2652031172402,16.2055916824814,23.0578371288644,14.2196283226275,20.2419678050063,15.3670828277955,16.298312356558,14.4430555265004,16.2631228944325,18.6508191613786,30.0298153425778,35.0339534024253,65.1231551396451,65.644501514134,17.7140497468459,429.7544706357,442.895748144425,496.4336334441,15.1201813950916,11.7263029990548,17.4660199617184,26.7521551211288,27.1534639811417,20.0547246753592,16.509910077279,12.0723030629829,23.9368951852697,21.228220638839,35.1318373129264,41.9936433447533,41.6669964162197,102.969004071503,70.7267826867159,60.3532152379045,24.6971069710283,96.482284631269,34.3785736662608,25.5945900642281,19.5078804362768,33.8921423277105,28.235693447268,29.5762798313678,33.2894845696978,48.4019642775402,30.469306623942,38.7056221552415,50.7339003704935,49.5208781282565,49.4350674759822,40.6339533764425,34.2522989997512,17.6391147886366,13.481324487948,15.7790829942313,8.5533557695032,12.2190066915604,15.2896087360894,15.3664785211945,20.3702004211851,25.4337939103027,14.9310568345379,58.9940727903426,70.90916992934,68.2059713042814,91.9686039654052,107.718724457295,126.859186029771,125.53054492824,172.329986333036,183.374941482565,101.862284292778,136.579796200987,176.394809194871,113.5817130137,53.0415643688935,48.2579042373944,63.2001012986011,353.987112359215,18.5701583535075,29.6596257124487,20.1996652072474,20.6527418493882,44.8916769944066,77.3641832879545,81.1755975088443,116.965276926794,106.524515721061,106.515785463201,169.106940786642,231.052505736568,223.048848332691,2168.37866304673,1836.22558857196,101.303440241921,111.478445507112,48.8073793562888,38.9142799486115,0,49.4843017320571,1.26203287766503,2.34263246577983,0.215423397732799,0.477937595905104,0.445597348164788,0.849229592366497,0,0,0,47.8768761468492,81.7574890799627,42.0234824654722,40.2330789603333,131.811128255056,65.0451177865818,27.4342118855129,29.3253850255809,23.5756349694873,45.476491503639,42.7334855642059,49.101375701962,65.0725375764735,44.2056749197054,61.9432045554199,48.4925599444994,45.3796390292022,29.2778060948258,15.665315180724,27.8121170132922,22.9340627483804,26.9557155136256,29.6092237219437,28.4669805641669,52.6724361968257,97.8581022625672,12.2862601101016,24.9197089802107,59.8537098177573,87.6751836958767,47.225020218746,38.7960118010194,26.754966658445,63.5428223853075,72.1304424820883,535.680211301268,201.846356868032,245.197554237498,210.972671845254,315.763666035568,327.61034403174,905.475096577267,1008.07031108731,954.409019093351,51.5522133728161,21.1945115699361,37.614101418467,24.6252177073707,28.0178316659388,29.0422209782416,31.558257054048,57.7747655520098,39.2633912976044,40.9583315602065,115.569112234168,2.81846469342095,10.9147078612105,10.092967917883,18.0839605159964,18.8573342277487,15.5439635451516,25.1144490701913,18.7494314175288,10.6956531314225,8.21386010808421,14.977560325409,813.728635617559,158.733843572199,166.802594435679,212.68038721465,335.854081072195,554.320979839729,456.021535478762,501.258255230515,505.639981340323,432.245007347159,593.059620974896,686.883143453775,635.767849559297,685.36615439272,37.1837829128947,63.9319545717306,5.02397597013064,6.54750003819906,78.0485959890049,234.790776789429,118.682252525188,54.2351999070037,57.1792198600314,45.7448992519824,31.7624413189952,37.2382083735608,35.5736087451433,27.4033007908257,33.9927253825365,39.8263275136765,29.2708782095743,29.4542565839733,34.1721805756201,2.59468368960442,26.7346665178691,24.0734384113329,52.5110508867515,20.5420899375423,24.4511866238519,34.2259960814487,36.2621700740454,39.1521435702015,38.4099761880972,30.1640366869385,36.0276312047406,39.2357916298807,38.9913178145654,42.617117965065,38.1034953026459,32.3317269386147,36.8456611085677,34.2031297666745,33.2669559503738,36.0012715004686,37.9798225180982,31.7120132629937,32.5575973256416,35.6674551774103,35.5381353145041,26.1587001208065,35.2513413326709,31.2349461845482,50.5028044491965,32.9805350385204,31.5214343601803,39.2861801442902,31.6071156019371,61.5372089029841,66.9492348873695,71.3491405758496,89.8161005921887,79.9585228047765,101.692644214097,94.8339447687524
|short_description=p1@Laptm5
}}

Revision as of 03:56, 14 September 2013

Short description:p1@Laptm5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Laptm5_5end
Coexpression cluster:MCL_coexpression_mm9:316
Association with transcript: 0bp_to_ENSMUST00000116245, ENSMUST00000136082, ENSMUST00000139023, ENSMUST00000156170, ENSMUST00000156225, NM_010686, uc008uzu.1, uc008uzv.1, uc012dlx.1, uc012dly.1_5end
EntrezGene:Laptm5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Laptm5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91124.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7441.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2418.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6142.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1111.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41129.75
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81235.34
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1173.88
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3227.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5115.43
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2750.17
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4707.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6566.56
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A381.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2598.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9441.69
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1235.19
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2198.67
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B917.48
Ileum epithelium, pool2.CNhs13232.10253-104C124.45
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81356.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1761.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31040.77
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91340.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21288.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41202.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B740.68
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2937.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9969.81
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11154.82
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.08
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C531.46
Mouse Granule cells, donor1.CNhs12131.11713-123C314.36
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73322.43
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74107.75
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23575.85
Mouse Microglia, donor1.CNhs12629.11718-123C81201.10
Mouse Microglia, donor2.CNhs12634.11736-123E8958.62
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.92
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.50
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.71
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E439.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.05
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.18
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D924.38
Mouse Schwann, donor2.CNhs12573.11746-123F96.88
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F744.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7119.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B677.65
accessory axillary lymph node, adult.CNhs10475.1063-29H92128.21
adrenal gland, adult.CNhs10508.49-24D7187.48
adrenal gland, embryo E14.CNhs11038.406-44C531.92
adrenal gland, embryo E16.CNhs11004.1254-43D637.14
adrenal gland, embryo E17.CNhs11043.1263-45I135.05
adrenal gland, embryo E18.CNhs11026.1262-18F527.28
adrenal gland, neonate N00.CNhs11191.1311-23C143.86
adrenal gland, neonate N25.CNhs11223.1377-27I334.81
amnion, adult pregnant day17.5.CNhs10488.583-22A819.53
aorta, adult.CNhs10498.46-23H1174.53
bone (os femoris), adult.CNhs10483.56-12G2667.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5108.87
bone (os femoris), neonate N16.CNhs11225.1525-43A6212.89
bone (os femoris), neonate N20.CNhs11195.1350-25C3197.83
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I215.71
colon, adult.CNhs10468.36-18H782.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7607.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1398.34
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4643.99
corpora quadrigemina, adult.CNhs10501.16-22A446.44
corpus striatum, adult.CNhs10487.19-21D864.51
corpus striatum, neonate N00.CNhs11226.630-43F18.67
cortex, adult.CNhs10473.12-14D560.14
cortex, neonate N30.CNhs11107.1392-42F243.47
diencephalon, adult.CNhs10482.20-12F256.10
diencephalon, neonate N30.CNhs11201.1388-42B242.67
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B159.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2261.88
epididymis, adult.CNhs10490.58-23B236.14
eyeball, adult.CNhs10484.31-12G450.72
eyeball, embryo E12.CNhs11016.345-16C616.92
eyeball, embryo E14.CNhs10521.399-16E211.27
eyeball, embryo E15.CNhs10593.426-16C916.21
eyeball, embryo E17.CNhs11023.1261-18D423.06
eyeball, neonate N00.CNhs11207.633-15C614.22
eyeball, neonate N01.CNhs11140.1532-43E720.24
eyeball, neonate N02.CNhs11205.1551-44G815.37
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E214.44
forelimb, embryo E12.CNhs10600.359-14H216.26
forelimb, embryo E13.CNhs10589.384-1E218.65
forelimb, embryo E14.CNhs10577.413-26A830.03
forelimb, embryo E15.CNhs11007.437-20E735.03
forelimb, embryo E17.CNhs10598.1517-43C465.12
forelimb, embryo E18.CNhs11008.1520-43B565.64
gonad, embryo E13.CNhs11044.1564-45I617.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8429.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2442.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5496.43
heart, embryo E11.CNhs10586.331-24E915.12
heart, embryo E12.CNhs11015.353-12F511.73
heart, embryo E13.CNhs11013.376-3I917.47
heart, embryo E14.CNhs10597.403-26D426.75
heart, embryo E15.CNhs11017.431-16C827.15
heart, embryo E16.CNhs11021.457-17C620.05
heart, embryo E17.CNhs11025.479-18E516.51
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E323.94
heart, neonate N03.CNhs11221.1349-25I221.23
heart, neonate N10.CNhs11118.749-24G135.13
heart, neonate N16.CNhs11209.782-15G141.99
heart, neonate N20.CNhs11127.821-26I641.67
heart, neonate N25.CNhs11196.1351-25D3102.97
heart, neonate N30.CNhs11202.1390-42D270.73
hippocampus, adult.CNhs10478.13-16E860.35
hippocampus, neonate N00.CNhs11228.627-43G124.70
intestinal mucosa, adult.CNhs10506.860-29I396.48
intestine, adult.CNhs10496.178-9A334.38
intestine, embryo E12.CNhs11019.1251-16I525.59
intestine, embryo E13.CNhs11010.381-16D519.51
intestine, embryo E15.CNhs10602.976-16D833.89
intestine, embryo E16.CNhs10585.463-22H428.24
intestine, embryo E17.CNhs10582.482-18D329.58
intestine, embryo E18.CNhs10526.1289-20F733.29
intestine, neonate N00.CNhs11126.644-26D148.40
intestine, neonate N01.CNhs11192.1322-23E930.47
intestine, neonate N06.CNhs11102.688-20B838.71
intestine, neonate N07.CNhs11095.720-20F250.73
intestine, neonate N10.CNhs11098.755-23A549.52
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E340.63
intestine, neonate N30.CNhs11131.1384-42G134.25
kidney, embryo E14.CNhs10606.411-4I917.64
kidney, embryo E15.CNhs10997.434-16F813.48
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C712.22
kidney, neonate N00.CNhs11214.646-21G715.29
kidney, neonate N10.CNhs11206.758-6D515.37
kidney, neonate N20.CNhs11113.832-19I120.37
kidney, neonate N25.CNhs11122.1353-25F325.43
kidney, neonate N30.CNhs11203.1385-42H114.93
liver, adult pregnant day01.CNhs10466.508-5B258.99
liver, embryo E12.CNhs10601.355-15F870.91
liver, embryo E13.CNhs10524.378-3H668.21
liver, embryo E14.CNhs10594.409-16E191.97
liver, embryo E15.CNhs10520.433-16D7107.72
liver, embryo E16.CNhs10523.462-17F5126.86
liver, embryo E17.CNhs10510.481-18A3125.53
liver, embryo E18.CNhs10579.499-43G4172.33
liver, neonate N00.CNhs11117.641-24F4183.37
liver, neonate N03.CNhs11123.1345-25G2101.86
liver, neonate N06.CNhs11101.684-20A8136.58
liver, neonate N07.CNhs11103.716-20H2176.39
liver, neonate N10.CNhs11115.751-24B9113.58
liver, neonate N20.CNhs11220.823-25A353.04
liver, neonate N25.CNhs11198.1368-26H148.26
liver, neonate N30.CNhs11106.1382-42D163.20
lung, adult.CNhs10474.28-22B1353.99
lung, embryo E12.CNhs10522.354-16G218.57
lung, embryo E14.CNhs10604.404-26F829.66
lung, embryo E15.CNhs11020.432-17C520.20
lung, embryo E16.CNhs10998.458-17B620.65
lung, embryo E17.CNhs10605.480-44A644.89
lung, embryo E18.CNhs10583.1287-20I677.36
lung, neonate N00.CNhs11224.640-42C681.18
lung, neonate N06.CNhs11212.683-20E5116.97
lung, neonate N07.CNhs11111.715-19A3106.52
lung, neonate N10.CNhs11219.750-23E6106.52
lung, neonate N20.CNhs11109.822-18A4169.11
lung, neonate N25.CNhs11119.1359-25C7231.05
lung, neonate N30.CNhs11133.1394-42H2223.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A12168.38
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11836.23
mammary gland, adult lactating day02.CNhs10480.595-22B6101.30
mammary gland, adult pregnant day19.CNhs10476.588-5H2111.48
medulla oblongata, adult.CNhs10477.17-12C248.81
medulla oblongata, neonate N30.CNhs11200.1396-42A338.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C249.48
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I947.88
ovary, adult.CNhs10507.91-2I781.76
ovary, embryo E18.CNhs11040.505-44H742.02
ovary, neonate N00.CNhs11217.1299-22I440.23
oviduct, adult pregnant day01.CNhs10500.988-6G6131.81
pancreas, adult.CNhs10486.34-16E465.05
pancreas, embryo E14.CNhs11012.405-44F427.43
pancreas, embryo E15.CNhs11042.1556-45F229.33
pancreas, embryo E16.CNhs11003.460-26E523.58
pancreas, embryo E17.CNhs10599.1558-45G345.48
pancreas, embryo E18.CNhs10580.1535-43I742.73
pancreas, neonate N00.CNhs11105.645-26G949.10
pancreas, neonate N01.CNhs11138.1531-43D765.07
pancreas, neonate N02.CNhs11139.1539-43D844.21
pancreas, neonate N16.CNhs11136.787-43B661.94
pancreas, neonate N25.CNhs11094.1555-45E248.49
pancreas, neonate N30.CNhs11182.1548-44H545.38
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C727.81
pituitary gland, embryo E14.CNhs11037.398-44A522.93
pituitary gland, embryo E15.CNhs10592.427-16B926.96
pituitary gland, embryo E16.CNhs11036.449-43F629.61
pituitary gland, embryo E17.CNhs11039.1265-44F528.47
pituitary gland, neonate N00.CNhs11190.1308-22E952.67
placenta, adult pregnant day10.CNhs10472.539-13I797.86
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F824.92
skin, adult.CNhs10492.30-1C359.85
skin, neonate N00.CNhs11124.650-25G487.68
skin, neonate N03.CNhs11215.662-22H347.23
skin, neonate N06.CNhs11097.693-20I538.80
skin, neonate N10.CNhs11108.762-6C426.75
small intestine, neonate N16.CNhs11114.790-21I163.54
spinal cord, adult.CNhs10505.24-13C972.13
spleen, adult.CNhs10465.25-2G2535.68
spleen, embryo E16.CNhs11035.461-43C1201.85
spleen, embryo E18.CNhs11011.1271-21F2245.20
spleen, neonate N10.CNhs11116.752-24D1210.97
spleen, neonate N20.CNhs11112.824-19H1315.76
spleen, neonate N25.CNhs11099.1354-25G3327.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6905.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91008.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3954.41
stomach, adult.CNhs10503.33-1H651.55
stomach, embryo E12.CNhs10588.356-43E321.19
stomach, embryo E15.CNhs10603.1252-16G837.61
stomach, embryo E16.CNhs11022.459-17D424.63
stomach, embryo E17.CNhs11006.1035-18D528.02
stomach, embryo E18.CNhs10999.1286-20C629.04
stomach, neonate N03.CNhs11193.1340-24B831.56
stomach, neonate N07.CNhs11210.718-18A957.77
stomach, neonate N25.CNhs11104.1355-25E439.26
stomach, neonate N30.CNhs11134.1386-42I140.96
submandibular gland, adult.CNhs10469.59-29C1115.57
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F510.91
testis, embryo E15.CNhs11034.443-27C510.09
testis, embryo E16.CNhs11033.470-26G518.08
testis, embryo E17.CNhs11029.486-18I518.86
testis, embryo E18.CNhs11027.503-18G515.54
testis, neonate N00.CNhs11189.1300-22B725.11
testis, neonate N07.CNhs11222.726-26I418.75
testis, neonate N10.CNhs11204.763-44D910.70
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E214.98
thymus, adult.CNhs10471.38-12B5813.73
thymus, embryo E14.CNhs11041.402-44I4158.73
thymus, embryo E15.CNhs11005.430-45I2166.80
thymus, embryo E16.CNhs11002.456-26C5212.68
thymus, embryo E17.CNhs10581.478-18C1335.85
thymus, embryo E18.CNhs10595.1273-19G4554.32
thymus, neonate N02.CNhs11181.1541-43F8456.02
thymus, neonate N03.CNhs11137.2104-43C7501.26
thymus, neonate N06.CNhs11197.681-26C4505.64
thymus, neonate N07.CNhs11211.713-19D3432.25
thymus, neonate N10.CNhs11194.748-24E4593.06
thymus, neonate N20.CNhs11186.820-7A2686.88
thymus, neonate N25.CNhs11125.1362-25G7635.77
thymus, neonate N30.CNhs11132.1393-42G2685.37
tongue, adult.CNhs10499.32-1B437.18
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H363.93
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.55
urinary bladder, adult.CNhs10481.879-12E478.05
uterus, adult pregnant day19.CNhs10497.590-15F5234.79
uterus, adult.CNhs10509.92-27E5118.68
vagina, adult.CNhs10502.89-27D554.24
vesicular gland, adult.CNhs10491.51-27F857.18
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.74
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.17
whole body, embryo E11.CNhs11014.324-5I82.59
whole body, embryo E12.CNhs10587.857-27C926.73
whole body, embryo E13.CNhs10512.372-23H224.07
whole body, embryo E14.5.CNhs10578.420-27D252.51
whole body, embryo E14.CNhs10519.395-14B120.54
whole body, embryo E16.CNhs10514.453-14F224.45
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G536.26
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.15
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G538.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G530.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G536.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G539.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G538.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G542.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G538.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G536.85
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G534.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G533.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G536.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G537.98
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.71
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G550.50
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G539.29
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.61
whole body, embryo E17.5.CNhs10513.490-9F961.54
whole body, embryo E17.CNhs10517.475-3I566.95
whole body, embryo E18.CNhs10516.493-3B371.35
whole body, neonate N00.CNhs10525.657-19C289.82
whole body, neonate N01.CNhs10576.659-23C679.96
whole body, neonate N06.CNhs10515.692-21D1101.69
whole body, neonate N10.CNhs10518.761-6B494.83





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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