FFCP PHASE1:Mm9::chr4:145167237..145167239,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=226|UniProt=|association_with_transcript=-42bp_to_ENSMUST00000117838_5end|description=CAGE_peak_1_at_ENSMUST00000117838_5end|id=chr4:145167237..145167239,-|ontology_enrichment_celltype=CL:0000219!9.00e-08!54;CL:0000542!4.58e-07!13;CL:0000051!4.58e-07!13;CL:0000838!5.35e-07!12;CL:0002320!5.93e-07!46;CL:0000134!5.93e-07!46;CL:0002031!6.65e-07!25|ontology_enrichment_celltype_v019_2=CL:0000219,2.17e-07,54;CL:0000542,3.94e-07,13;CL:0000051,3.94e-07,13;CL:0002031,4.05e-07,25;CL:0000838,4.61e-07,12;CL:0000084,9.02e-07,11;CL:0000827,9.02e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!5.93e-07!46|ontology_enrichment_uberon_v019_2=|phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0.60492842261366,1.00179145989269,0.33575854382378,3.03696432774183,4.64843964389675,8.869689495555,8.89445200023575,7.19115466547121,4.94587385771086,6.16322627752341,6.11942816932982,4.33042690360362,2.22722794128809,2.09868563438444,3.94327706697797,2.60517423850904,3.81950686618227,1.19060606211498,6.25532992565577,3.6567970479451,4.31979541542198,2.06468352960453,0.57423196411502,0,0,3.6104449696711,0.504060259519861,0.886922042621219,5.08024538767705,4.92051830067656,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0,0,0,3.39921408534059,2.63580021170738,2.75320128242522,10.1710874765245,3.2703773457067,2.41654801007919,0.972149495371417,5.17949760013841,2.87505128729943,3.52343472721246,4.35217285206807,2.35265659399725,2.57259436035947,2.57880095944881,4.64104883049698,3.23706337375356,2.11596391708813,2.53532561402472,7.45457970552091,7.11435836888911,4.49949858640699,11.8663963508037,7.8152812644071,4.49400165777607,1.53687322128622,0.829516898467821,2.43010688997043,4.20649922702764,0.285650984403804,1.76694832761291,4.16468717330844,2.49198224647415,1.83843757322004,5.50579404996943,0.510749352340751,0.921639199537461,1.97829431595291,1.09785172322892,1.04182674111352,0.837548997004143,3.93933827022176,0.45839474333043,2.65165726926301,1.28134512719193,1.67759501242771,2.19605960666234,1.81371744256285,2.6087803983151,2.58127163094416,1.3599426674155,2.69851595818909,1.29955283489534,0.896053774194671,2.38755514223978,0.852151612890289,8.3131521472918,3.18005617059306,0,1.28326477414318,2.54805239706646,0,1.94841936910093,2.53359865475099,4.04419556011827,1.02765491747154,0.517875767294343,1.33597925158342,1.21439728736295,4.87144765299426,1.61430848079241,0.904335843315735,2.11659672844269,0.753999547978053,3.70792451601561,1.15679485535929,7.07688441559899,0.970601099684455,1.32504911076236,0.484875253135222,74.5567044872489,1.17112318804619,0.209446706813455,3.57639877292028,0.838705871541442,2.99951365496704,0.635351135365324,1.3481157546434,0.915001205637253,1.13088916901578,0.695297280769106,0.767146371990992,2.28566849015516,0.648965052271031,2.03678727700633,1.36847667671102,1.0108910337347,1.05220927943237,2.34216797332867,5.0578462975364,2.70093194708024,1.80845781402858,0.612328492361951,0.640568601424249,0.749613796477831,1.03481348295606,3.23351989399263,3.02569728268511,2.81521798662318,6.35667624039967,2.22437799380478,4.179025998266,2.46938563689532,2.18937693500343,0.702213187313235,0.772043721344145,4.26245249093389,2.07125772535502,2.11073453982987,2.34080679899319,2.3674473558521,2.16440654922144,1.23413690309903,1.16266972375204,1.87791380979733,0.934122738937356,0.658239399653922,0.492502392237286,0.324275238183423,1.16959989940266,1.53685080703735,0.805238512562231,1.05144974282064,0.617427674275707,1.65209391491899,2.3800550999719,2.77274725695804,2.32236671860439,2.96395161040815,3.22693639397348,4.44756087689741,3.42406127002606,1.89811624617805,2.63518327558417,3.2673577144035,2.18852119245266,1.9496408711912,0,1.51296634912286,1.1948476395262,2.84501851429623,1.71372768914593,4.50830942692322,1.4255592949172,3.29719228184964,0.841629838683823,0.505892296994058,0.885660887877613,0.470996183524124,1.1105744752962,2.66807364378434,3.33690211432188,2.55526693647164,2.47348323623339,3.04290182082754,2.41177159752417,3.31013607315846,4.31544206176216,2.59416362840057,1.37280706594041,0,1.11642284300551,0.936113019343682,0.252578877947112,0.358794827043824,0,1.47802552133284,3.41084541186873,2.77040459951444,2.71592137240301,4.92849521405854,2.01007508930179,4.04674189506223,1.36593553500459,0.788175720530955,1.32878813789265,0.637819074629948,1.80249646187312,0.518054945597687,1.15719246865209,3.01582567878545,0.54390568381871,4.91764273019036,3.31124095565679,1.60550589987792,0.586058432961016,8.85248705034047,1.00988370881749,1.89304931649754,1.95219372148319,2.36965737506079,2.62865677747807,2.00518806674155,2.83076530788832,3.64329631507405,3.21481443702443,2.76701444562566,0.642642632843614,1.70328102249922,3.20518086601059,1.95464351224291,1.81467135269789,6.63725691699814,3.39892890616974,3.62788268357701,3.58349651536206,8.26845300066164,7.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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=226 | |||
|UniProt= | |||
|association_with_transcript=-42bp_to_ENSMUST00000117838_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000117838_5end | |||
|id=chr4:145167237..145167239,- | |||
|ontology_enrichment_celltype=CL:0000219!9.00e-08!54;CL:0000542!4.58e-07!13;CL:0000051!4.58e-07!13;CL:0000838!5.35e-07!12;CL:0002320!5.93e-07!46;CL:0000134!5.93e-07!46;CL:0002031!6.65e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.17e-07,54;CL:0000542,3.94e-07,13;CL:0000051,3.94e-07,13;CL:0002031,4.05e-07,25;CL:0000838,4.61e-07,12;CL:0000084,9.02e-07,11;CL:0000827,9.02e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.93e-07!46 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0.60492842261366,1.00179145989269,0.33575854382378,3.03696432774183,4.64843964389675,8.869689495555,8.89445200023575,7.19115466547121,4.94587385771086,6.16322627752341,6.11942816932982,4.33042690360362,2.22722794128809,2.09868563438444,3.94327706697797,2.60517423850904,3.81950686618227,1.19060606211498,6.25532992565577,3.6567970479451,4.31979541542198,2.06468352960453,0.57423196411502,0,0,3.6104449696711,0.504060259519861,0.886922042621219,5.08024538767705,4.92051830067656,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0,0,0,3.39921408534059,2.63580021170738,2.75320128242522,10.1710874765245,3.2703773457067,2.41654801007919,0.972149495371417,5.17949760013841,2.87505128729943,3.52343472721246,4.35217285206807,2.35265659399725,2.57259436035947,2.57880095944881,4.64104883049698,3.23706337375356,2.11596391708813,2.53532561402472,7.45457970552091,7.11435836888911,4.49949858640699,11.8663963508037,7.8152812644071,4.49400165777607,1.53687322128622,0.829516898467821,2.43010688997043,4.20649922702764,0.285650984403804,1.76694832761291,4.16468717330844,2.49198224647415,1.83843757322004,5.50579404996943,0.510749352340751,0.921639199537461,1.97829431595291,1.09785172322892,1.04182674111352,0.837548997004143,3.93933827022176,0.45839474333043,2.65165726926301,1.28134512719193,1.67759501242771,2.19605960666234,1.81371744256285,2.6087803983151,2.58127163094416,1.3599426674155,2.69851595818909,1.29955283489534,0.896053774194671,2.38755514223978,0.852151612890289,8.3131521472918,3.18005617059306,0,1.28326477414318,2.54805239706646,0,1.94841936910093,2.53359865475099,4.04419556011827,1.02765491747154,0.517875767294343,1.33597925158342,1.21439728736295,4.87144765299426,1.61430848079241,0.904335843315735,2.11659672844269,0.753999547978053,3.70792451601561,1.15679485535929,7.07688441559899,0.970601099684455,1.32504911076236,0.484875253135222,74.5567044872489,1.17112318804619,0.209446706813455,3.57639877292028,0.838705871541442,2.99951365496704,0.635351135365324,1.3481157546434,0.915001205637253,1.13088916901578,0.695297280769106,0.767146371990992,2.28566849015516,0.648965052271031,2.03678727700633,1.36847667671102,1.0108910337347,1.05220927943237,2.34216797332867,5.0578462975364,2.70093194708024,1.80845781402858,0.612328492361951,0.640568601424249,0.749613796477831,1.03481348295606,3.23351989399263,3.02569728268511,2.81521798662318,6.35667624039967,2.22437799380478,4.179025998266,2.46938563689532,2.18937693500343,0.702213187313235,0.772043721344145,4.26245249093389,2.07125772535502,2.11073453982987,2.34080679899319,2.3674473558521,2.16440654922144,1.23413690309903,1.16266972375204,1.87791380979733,0.934122738937356,0.658239399653922,0.492502392237286,0.324275238183423,1.16959989940266,1.53685080703735,0.805238512562231,1.05144974282064,0.617427674275707,1.65209391491899,2.3800550999719,2.77274725695804,2.32236671860439,2.96395161040815,3.22693639397348,4.44756087689741,3.42406127002606,1.89811624617805,2.63518327558417,3.2673577144035,2.18852119245266,1.9496408711912,0,1.51296634912286,1.1948476395262,2.84501851429623,1.71372768914593,4.50830942692322,1.4255592949172,3.29719228184964,0.841629838683823,0.505892296994058,0.885660887877613,0.470996183524124,1.1105744752962,2.66807364378434,3.33690211432188,2.55526693647164,2.47348323623339,3.04290182082754,2.41177159752417,3.31013607315846,4.31544206176216,2.59416362840057,1.37280706594041,0,1.11642284300551,0.936113019343682,0.252578877947112,0.358794827043824,0,1.47802552133284,3.41084541186873,2.77040459951444,2.71592137240301,4.92849521405854,2.01007508930179,4.04674189506223,1.36593553500459,0.788175720530955,1.32878813789265,0.637819074629948,1.80249646187312,0.518054945597687,1.15719246865209,3.01582567878545,0.54390568381871,4.91764273019036,3.31124095565679,1.60550589987792,0.586058432961016,8.85248705034047,1.00988370881749,1.89304931649754,1.95219372148319,2.36965737506079,2.62865677747807,2.00518806674155,2.83076530788832,3.64329631507405,3.21481443702443,2.76701444562566,0.642642632843614,1.70328102249922,3.20518086601059,1.95464351224291,1.81467135269789,6.63725691699814,3.39892890616974,3.62788268357701,3.58349651536206,8.26845300066164,7.99331384654211,1.80899805217755,1.81766864738753,1.42598951353889,1.58018378967908,5.27093042874994,5.15677716240934,0.680879211507576,1.62054984628179,3.23396709456886,2.35770738534752,1.59606210278046,1.07021290561242,1.97458824722545,1.522324745573,1.40803024838226,1.48282449604674,1.98475558249466,1.48397627647332,0.161464426695906,0.603129249281559,1.3130957840345,0.820704498725306,2.04036585640896,0.556275906031529,3.93003025835061,1.03193433981611,3.51869602002452,1.69531611304222,1.50363650493128,1.60144721244566,0,0.419854356970974,0.690999869022119,3.81868247206045,2.37251995185852,3.65975040828328,1.62008011232702,2.29997125615916,2.40198820120795,1.48350781023303,1.07449492442937,1.04702376793612,1.16653475962614,2.4853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| |||
|short_description=p1@ENSMUST00000117838 | |||
}} | |||
Revision as of 04:24, 14 September 2013
| Short description: | p1@ENSMUST00000117838 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ENSMUST00000117838_5end |
| Coexpression cluster: | MCL_coexpression_mm9:226 |
| Association with transcript: | -42bp_to_ENSMUST00000117838_5end |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 2.17e-07 | 54 |
| lymphocyte | 3.94e-07 | 13 |
| common lymphoid progenitor | 3.94e-07 | 13 |
| hematopoietic lineage restricted progenitor cell | 4.05e-07 | 25 |
| lymphoid lineage restricted progenitor cell | 4.61e-07 | 12 |
| T cell | 9.02e-07 | 11 |
| pro-T cell | 9.02e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
