FFCP PHASE1:Mm9::chr4:40668160..40668169,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:40668160..40668169,+|id=chr4:40668160..40668169,+|ontology_enrichment_celltype=CL:0000988!4.88e-13!32;CL:0002032!4.88e-13!32;CL:0000037!4.88e-13!32;CL:0000566!4.88e-13!32;CL:0000837!4.88e-13!32;CL:0000791!6.83e-13!9;CL:0000789!6.83e-13!9;CL:0002420!6.83e-13!9;CL:0002419!6.83e-13!9;CL:0000790!6.83e-13!9;CL:0000084!1.59e-10!11;CL:0000827!1.59e-10!11;CL:0000624!1.20e-09!8;CL:0000838!1.24e-09!12;CL:0000542!7.01e-09!13;CL:0000051!7.01e-09!13;CL:0002320!1.25e-08!46;CL:0000134!1.25e-08!46;CL:0000034!1.58e-08!97;CL:0000219!3.92e-07!54;CL:0000738!9.53e-07!17;CL:0002087!9.53e-07!17|ontology_enrichment_celltype_v019_2=CL:0000815,1.86e-15,1;CL:0000792,1.86e-15,1;CL:0000355,1.63e-07,9|ontology_enrichment_disease=DOID:0060100!2.39e-15!3;DOID:4045!2.39e-15!3;DOID:0050686!6.43e-08!6|ontology_enrichment_disease_v019_2=DOID:0060100,1.59e-20,3;DOID:4045,1.59e-20,3;DOID:0050686,8.53e-11,6|ontology_enrichment_uberon=UBERON:0002384!1.25e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.63e-07,9;UBERON:0002036,1.63e-07,9;UBERON:0002385,1.63e-07,9;UBERON:0000486,1.63e-07,9;UBERON:0007503,1.63e-07,9;UBERON:0001015,1.63e-07,9;UBERON:0002329,1.63e-07,9;UBERON:0003082,1.63e-07,9;UBERON:0003059,1.63e-07,9;UBERON:0007282,1.63e-07,9;UBERON:0004290,1.63e-07,9;UBERON:0009618,1.63e-07,9;UBERON:0000383,7.47e-07,10|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0,0,0,0.856003649656029,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,3.906676722619,0.523523743973798,16.4704816648684,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:40668160..40668169,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:40668160..40668169,+ | |||
|id=chr4:40668160..40668169,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.88e-13!32;CL:0002032!4.88e-13!32;CL:0000037!4.88e-13!32;CL:0000566!4.88e-13!32;CL:0000837!4.88e-13!32;CL:0000791!6.83e-13!9;CL:0000789!6.83e-13!9;CL:0002420!6.83e-13!9;CL:0002419!6.83e-13!9;CL:0000790!6.83e-13!9;CL:0000084!1.59e-10!11;CL:0000827!1.59e-10!11;CL:0000624!1.20e-09!8;CL:0000838!1.24e-09!12;CL:0000542!7.01e-09!13;CL:0000051!7.01e-09!13;CL:0002320!1.25e-08!46;CL:0000134!1.25e-08!46;CL:0000034!1.58e-08!97;CL:0000219!3.92e-07!54;CL:0000738!9.53e-07!17;CL:0002087!9.53e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.86e-15,1;CL:0000792,1.86e-15,1;CL:0000355,1.63e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.39e-15!3;DOID:4045!2.39e-15!3;DOID:0050686!6.43e-08!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.59e-20,3;DOID:4045,1.59e-20,3;DOID:0050686,8.53e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.25e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.63e-07,9;UBERON:0002036,1.63e-07,9;UBERON:0002385,1.63e-07,9;UBERON:0000486,1.63e-07,9;UBERON:0007503,1.63e-07,9;UBERON:0001015,1.63e-07,9;UBERON:0002329,1.63e-07,9;UBERON:0003082,1.63e-07,9;UBERON:0003059,1.63e-07,9;UBERON:0007282,1.63e-07,9;UBERON:0004290,1.63e-07,9;UBERON:0009618,1.63e-07,9;UBERON:0000383,7.47e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0,0,0,0.856003649656029,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,3.906676722619,0.523523743973798,16.4704816648684,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:40668160..40668169,+ | |||
}} |
Revision as of 04:55, 14 September 2013
Short description: | p@chr4:40668160..40668169, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:40668160..40668169, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.86e-15 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.86e-15 | 1 |
multi-potent skeletal muscle stem cell | 1.63e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.63e-07 | 9 |
striated muscle tissue | 1.63e-07 | 9 |
muscle tissue | 1.63e-07 | 9 |
multilaminar epithelium | 1.63e-07 | 9 |
epithelial vesicle | 1.63e-07 | 9 |
musculature | 1.63e-07 | 9 |
somite | 1.63e-07 | 9 |
myotome | 1.63e-07 | 9 |
presomitic mesoderm | 1.63e-07 | 9 |
presumptive segmental plate | 1.63e-07 | 9 |
dermomyotome | 1.63e-07 | 9 |
trunk paraxial mesoderm | 1.63e-07 | 9 |
musculature of body | 7.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.59e-20 | 3 |
muscle cancer | 1.59e-20 | 3 |
organ system cancer | 8.53e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.