FFCP PHASE1:Mm9::chr4:45333452..45333506,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66362|HGNC=|MCL_coexpression_id=268|UniProt=Q7TQK4,A2AKB8|association_with_transcript=0bp_to_ENSMUST00000030003,ENSMUST00000130843,NM_025513,uc008ssk.1,uc008ssl.1_5end|description=CAGE_peak_1_at_Exosc3_5end|id=chr4:45333452..45333506,-|ontology_enrichment_celltype=CL:0000988!2.99e-09!32;CL:0002032!2.99e-09!32;CL:0000037!2.99e-09!32;CL:0000566!2.99e-09!32;CL:0000837!2.99e-09!32;CL:0000542!5.41e-07!13;CL:0000051!5.41e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,2.99e-09,32;CL:0002032,2.99e-09,32;CL:0000037,2.99e-09,32;CL:0000837,2.99e-09,32;CL:0000542,5.41e-07,13;CL:0000051,5.41e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.15e-12!70;UBERON:0005057!2.58e-12!51;UBERON:0004177!7.00e-12!29;UBERON:0002193!3.78e-11!48;UBERON:0002390!4.21e-11!45;UBERON:0003061!4.21e-11!45;UBERON:0003104!5.52e-10!131;UBERON:0009142!5.52e-10!131;UBERON:0000077!1.22e-09!97;UBERON:0002370!1.52e-09!23;UBERON:0000974!1.52e-09!23;UBERON:0004807!1.52e-09!23;UBERON:0005058!1.52e-09!23;UBERON:0003351!1.52e-09!23;UBERON:0009113!1.52e-09!23;UBERON:0003295!1.52e-09!23;UBERON:0009722!1.52e-09!23;UBERON:0005562!1.52e-09!23;UBERON:0007690!1.52e-09!23;UBERON:0004119!2.31e-09!130;UBERON:0000925!2.31e-09!130;UBERON:0006595!2.31e-09!130;UBERON:0001041!2.87e-09!92;UBERON:0006562!4.49e-09!24;UBERON:0001557!4.49e-09!24;UBERON:0001042!4.49e-09!24;UBERON:0008814!4.49e-09!24;UBERON:0009145!4.49e-09!24;UBERON:0000072!7.08e-09!27;UBERON:0003929!7.33e-09!55;UBERON:0002368!7.57e-09!60;UBERON:0004921!7.67e-09!126;UBERON:0004185!7.67e-09!126;UBERON:0001007!8.47e-09!128;UBERON:0001555!8.47e-09!128;UBERON:0007026!8.47e-09!128;UBERON:0003408!1.01e-08!24;UBERON:0000949!3.82e-08!72;UBERON:0005911!6.07e-08!69;UBERON:0000490!7.14e-08!66;UBERON:0002530!7.75e-08!65;UBERON:0000926!9.97e-08!193;UBERON:0004120!9.97e-08!193;UBERON:0006603!9.97e-08!193;UBERON:0000065!6.23e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.00e-12,29;UBERON:0005057,7.00e-12,29;UBERON:0002193,3.78e-11,48;UBERON:0002405,3.78e-11,48;UBERON:0002390,4.21e-11,45;UBERON:0003061,4.21e-11,45;UBERON:0000077,7.43e-11,35;UBERON:0000153,6.03e-10,43;UBERON:0001041,8.93e-10,80;UBERON:0007811,1.31e-09,36;UBERON:0002370,1.52e-09,23;UBERON:0000974,1.52e-09,23;UBERON:0004807,1.52e-09,23;UBERON:0005058,1.52e-09,23;UBERON:0003351,1.52e-09,23;UBERON:0009113,1.52e-09,23;UBERON:0003295,1.52e-09,23;UBERON:0009722,1.52e-09,23;UBERON:0005562,1.52e-09,23;UBERON:0007690,1.52e-09,23;UBERON:0004119,1.62e-09,118;UBERON:0000925,1.62e-09,118;UBERON:0006595,1.62e-09,118;UBERON:0006562,4.49e-09,24;UBERON:0001557,4.49e-09,24;UBERON:0001042,4.49e-09,24;UBERON:0008814,4.49e-09,24;UBERON:0009145,4.49e-09,24;UBERON:0004921,5.27e-09,114;UBERON:0001007,6.03e-09,116;UBERON:0001555,6.03e-09,116;UBERON:0007026,6.03e-09,116;UBERON:0000072,7.08e-09,27;UBERON:0003929,7.33e-09,55;UBERON:0002368,7.57e-09,60;UBERON:0003408,1.01e-08,24;UBERON:0000949,3.82e-08,72;UBERON:0005911,6.07e-08,69;UBERON:0000490,7.14e-08,66;UBERON:0002530,7.75e-08,65;UBERON:0000065,6.23e-07,41|phase1_expression=50.6070356851149,32.8036883180999,28.2099528421512,22.6848158480123,18.0322462780685,45.4952826881221,45.0872396349365,76.9575007711795,75.3219663511417,58.0480025278544,154.438607339405,117.504390200131,72.5891094908312,71.4224687763209,72.2848183139988,67.0193135060324,55.9649502502517,72.5562980323947,73.6304508462817,78.5120855826356,24.322380983206,109.120755369773,119.890703214771,37.1182420880703,43.3583541216951,41.3447014162815,39.1993416504758,39.6467068142036,34.2042155021473,41.5849714103886,46.563407237614,59.6928833052053,38.1340168302433,47.5445043046316,67.0135757822957,69.8185510505668,70.0300891979926,51.8979222113766,94.5415766873799,61.7758017889082,51.1761394586982,43.7149110373405,49.5220560091777,32.1036885837722,31.32547174683,23.4939842766952,34.4252191513137,31.8316728315452,29.2182623036848,36.5528210259653,34.2966732982138,37.3756667348926,67.9519554533832,44.9724528047034,50.0779760722271,39.3606937134999,36.1032134322833,34.5500301825886,30.1451526680801,23.2756030879694,29.7900759647904,28.4629406938071,25.789549087223,34.6461391153339,40.543520865246,26.2877642530057,25.166409283546,33.8112108682968,38.0540877172113,34.1565023979177,42.9062921156819,15.996455126613,22.0868540951614,38.4621109534956,39.2966431174769,29.4150011715207,23.1243350098716,19.4084753889485,20.1224558565679,26.7729164092293,24.6101761290482,22.3992749339407,18.4260779340911,21.3849791812038,22.3085441754143,16.2045722010517,19.2201769078789,21.4359362699096,50.5850971465669,35.2919185698688,32.4648227345879,45.6024654800135,28.5587960157255,39.9380361811985,34.4381501247265,42.5625542742469,31.5999945296442,35.449507096236,41.0461887272533,37.1006553235857,40.985435155014,33.3648841277226,17.8363667794652,35.5533351576666,38.5354052999961,46.364855381943,49.035871166434,27.4041311325744,62.6629678426156,44.087315302253,44.4122436521308,58.152906357619,44.2781754731632,52.1500336312074,30.690652562419,42.8523076434193,41.0343646439061,28.1968745993828,62.8073491884411,36.3975412381671,42.1807300259352,46.5480243009813,41.0061874679869,37.475942017478,24.5052646971742,43.1722423302519,81.9535451620495,146.976169093385,94.286108488214,26.8125244534633,31.1100409916666,23.2460551408799,21.9018643442268,27.3615539343454,23.4800490352303,20.1179166204019,37.7824039884673,42.5471839486518,52.819056512638,39.9839526184301,64.2794988235756,72.1892607921105,57.6198815377118,52.4452766068288,51.3675568592525,63.4162915410006,52.8477726516871,33.372734825333,60.143470028263,51.4368538056468,44.691585537643,51.5109971204801,40.8729456361629,34.8252166522167,48.7703663286826,42.5933330991575,164.317885831297,121.468212158146,81.8390878259307,32.1044947430028,39.6349041368053,34.0317296161318,26.7521551211288,28.1372851398787,27.9223474326155,27.6715394252985,27.6321603441608,21.8351190226607,30.2790123840804,31.3559856391072,33.724624771076,33.6259971078264,40.3972212135533,34.0884303651344,24.6039239820029,28.4016730166825,41.3023478729747,43.6343434994848,59.294133648795,57.8269312932492,51.8047194514815,48.6057294342256,44.9203648566638,46.7955040236896,34.1660924312048,40.1865449526587,45.4916727928488,33.2257308308722,43.6719555146829,35.9527763461689,36.9596065285727,33.8540164532424,65.4354258288132,60.7802087083757,51.845558409617,56.0041151574614,49.2639317405769,31.6312547705337,37.0566107548148,39.2642993625742,36.2667061313576,33.6874257506515,46.2466098255952,81.0867213780217,84.7169268937905,82.5243952452413,69.783881757645,64.1531244941429,59.8370751686337,54.9499622531048,35.0212089834076,54.088598398052,46.0058260887535,48.7504641445739,41.188972851122,53.2941432468406,54.3574162971394,33.7710464954357,43.0474933088189,59.8792861194732,57.6896016604772,51.2630159041068,48.1115008991429,39.3639704988267,42.6098117185965,35.1240566144038,42.5614889086716,29.4548037232871,32.8476823434423,37.6885623846197,37.2999560830334,35.5836684110518,22.6186925908908,21.7562273527484,30.4893849271802,34.2161565417868,25.0458920380955,21.918585392742,51.8034427390294,33.3261623909772,41.0160685241134,41.3865068954437,37.9145180009726,39.4298516621711,37.4301772458422,35.1014898178152,34.408909642366,34.4861912335348,35.5759000151871,25.0630626809009,38.6077031766491,38.9963672031289,36.8124528139082,41.0775606201613,34.5137359683903,55.5967656794908,55.6275344815142,46.9626648592186,45.476491503639,48.5747533751405,35.1462478708781,31.2639007350655,36.7192299736263,40.7687417737203,42.1674434299995,34.0347292719017,40.5123130847008,55.2787558676122,51.3553974617535,40.5096996209709,37.7734697658043,29.7875925395458,39.491764944509,24.6616608782825,54.4438362707808,64.6087816134652,46.7520203876519,49.6307621353855,38.7514624070173,42.3999862244936,50.733246201333,55.9720468130659,39.3499129450298,20.7676338251771,63.2222258952055,49.120074575247,66.4848353257265,72.1451190327967,76.00199061289,70.6924555208155,62.212105377751,62.4183477363515,58.4585889192713,41.0508365746499,53.1444469216307,45.3402411692873,52.3825902985736,42.0267474989082,40.3970742930429,41.6730830329096,33.1440357458597,36.1223199937961,35.1256577620759,32.3096442805201,35.512655137104,43.8083479908858,48.3138792134725,37.9179817270893,32.677435339866,44.7733732550562,28.9872379455012,38.1498847592774,39.7416915373444,34.7881133989449,34.275570744686,96.3833917915944,73.9947035809099,83.5040081750046,101.208321099702,90.4084813120781,85.2343012011626,89.9061962409367,93.4874707015074,89.9611069037995,95.8681627719898,85.9039097365881,88.8815872346542,77.2581088371846,71.2949103307571,37.4105132965099,76.3631679606783,87.0224409111914,66.9859619292673,34.9673165198265,42.4162394519671,41.5754187086692,38.1575714760737,44.138345155112,22.0253218620656,17.0320337507655,21.7700295106971,10.3111909406213,13.7016503954128,21.1510291269116,12.1504050041725,22.0657389579868,24.9228324941313,24.3347346523355,74.623102913023,59.8537310101547,53.7810858125523,49.8368769990003,56.3859407469272,46.8800946547536,40.448904459894,38.940625818151,44.9286893428541,35.8830040704592,36.5010191841945,37.3480155944431,30.9953389725311,32.3967271168639,33.4848784011225,23.3383908728706,31.6364209829455,30.8654752741928,43.2690195843472,39.7437084362873,40.8014410338644,39.3996289673729,31.4735770730464,36.1912577414498,35.7615645578256,37.8227297275794,40.24415403201,44.1957115215576,34.6300490306947,43.2079549176459,32.5059949660237,37.4317033027141,35.1938697125933,33.0015471726108,39.1600420291717,30.2270799304915,38.5987153934924,34.594239701776,28.11938481412,35.7358098973615,34.3164396718224|short_description=p1@Exosc3}} | ||
|EntrezGene=66362 | |||
|HGNC= | |||
|MCL_coexpression_id=268 | |||
|UniProt=Q7TQK4,A2AKB8 | |||
|association_with_transcript=0bp_to_ENSMUST00000030003,ENSMUST00000130843,NM_025513,uc008ssk.1,uc008ssl.1_5end | |||
|description=CAGE_peak_1_at_Exosc3_5end | |||
|id=chr4:45333452..45333506,- | |||
|ontology_enrichment_celltype=CL:0000988!2.99e-09!32;CL:0002032!2.99e-09!32;CL:0000037!2.99e-09!32;CL:0000566!2.99e-09!32;CL:0000837!2.99e-09!32;CL:0000542!5.41e-07!13;CL:0000051!5.41e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.99e-09,32;CL:0002032,2.99e-09,32;CL:0000037,2.99e-09,32;CL:0000837,2.99e-09,32;CL:0000542,5.41e-07,13;CL:0000051,5.41e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.15e-12!70;UBERON:0005057!2.58e-12!51;UBERON:0004177!7.00e-12!29;UBERON:0002193!3.78e-11!48;UBERON:0002390!4.21e-11!45;UBERON:0003061!4.21e-11!45;UBERON:0003104!5.52e-10!131;UBERON:0009142!5.52e-10!131;UBERON:0000077!1.22e-09!97;UBERON:0002370!1.52e-09!23;UBERON:0000974!1.52e-09!23;UBERON:0004807!1.52e-09!23;UBERON:0005058!1.52e-09!23;UBERON:0003351!1.52e-09!23;UBERON:0009113!1.52e-09!23;UBERON:0003295!1.52e-09!23;UBERON:0009722!1.52e-09!23;UBERON:0005562!1.52e-09!23;UBERON:0007690!1.52e-09!23;UBERON:0004119!2.31e-09!130;UBERON:0000925!2.31e-09!130;UBERON:0006595!2.31e-09!130;UBERON:0001041!2.87e-09!92;UBERON:0006562!4.49e-09!24;UBERON:0001557!4.49e-09!24;UBERON:0001042!4.49e-09!24;UBERON:0008814!4.49e-09!24;UBERON:0009145!4.49e-09!24;UBERON:0000072!7.08e-09!27;UBERON:0003929!7.33e-09!55;UBERON:0002368!7.57e-09!60;UBERON:0004921!7.67e-09!126;UBERON:0004185!7.67e-09!126;UBERON:0001007!8.47e-09!128;UBERON:0001555!8.47e-09!128;UBERON:0007026!8.47e-09!128;UBERON:0003408!1.01e-08!24;UBERON:0000949!3.82e-08!72;UBERON:0005911!6.07e-08!69;UBERON:0000490!7.14e-08!66;UBERON:0002530!7.75e-08!65;UBERON:0000926!9.97e-08!193;UBERON:0004120!9.97e-08!193;UBERON:0006603!9.97e-08!193;UBERON:0000065!6.23e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.00e-12,29;UBERON:0005057,7.00e-12,29;UBERON:0002193,3.78e-11,48;UBERON:0002405,3.78e-11,48;UBERON:0002390,4.21e-11,45;UBERON:0003061,4.21e-11,45;UBERON:0000077,7.43e-11,35;UBERON:0000153,6.03e-10,43;UBERON:0001041,8.93e-10,80;UBERON:0007811,1.31e-09,36;UBERON:0002370,1.52e-09,23;UBERON:0000974,1.52e-09,23;UBERON:0004807,1.52e-09,23;UBERON:0005058,1.52e-09,23;UBERON:0003351,1.52e-09,23;UBERON:0009113,1.52e-09,23;UBERON:0003295,1.52e-09,23;UBERON:0009722,1.52e-09,23;UBERON:0005562,1.52e-09,23;UBERON:0007690,1.52e-09,23;UBERON:0004119,1.62e-09,118;UBERON:0000925,1.62e-09,118;UBERON:0006595,1.62e-09,118;UBERON:0006562,4.49e-09,24;UBERON:0001557,4.49e-09,24;UBERON:0001042,4.49e-09,24;UBERON:0008814,4.49e-09,24;UBERON:0009145,4.49e-09,24;UBERON:0004921,5.27e-09,114;UBERON:0001007,6.03e-09,116;UBERON:0001555,6.03e-09,116;UBERON:0007026,6.03e-09,116;UBERON:0000072,7.08e-09,27;UBERON:0003929,7.33e-09,55;UBERON:0002368,7.57e-09,60;UBERON:0003408,1.01e-08,24;UBERON:0000949,3.82e-08,72;UBERON:0005911,6.07e-08,69;UBERON:0000490,7.14e-08,66;UBERON:0002530,7.75e-08,65;UBERON:0000065,6.23e-07,41 | |||
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| |||
|short_description=p1@Exosc3 | |||
}} |
Revision as of 05:04, 14 September 2013
Short description: | p1@Exosc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Exosc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:268 |
Association with transcript: | 0bp_to_ENSMUST00000030003, ENSMUST00000130843, NM_025513, uc008ssk.1, uc008ssl.1_5end |
EntrezGene: | Exosc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.99e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.99e-09 | 32 |
hematopoietic stem cell | 2.99e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.99e-09 | 32 |
lymphocyte | 5.41e-07 | 13 |
common lymphoid progenitor | 5.41e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.