FFCP PHASE1:Mm9::chr5:104450818..104450884,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=114664|HGNC=|MCL_coexpression_id=1326|UniProt=Q9EQ06|association_with_transcript=0bp_to_ENSMUST00000119025_5end|description=CAGE_peak_1_at_Hsd17b11_5end|id=chr5:104450818..104450884,-|ontology_enrichment_celltype=CL:0000066!4.44e-08!25|ontology_enrichment_celltype_v019_2=CL:0000066,4.44e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.54e-09!15;UBERON:0000160!8.46e-09!43;UBERON:0005256!3.34e-08!47;UBERON:0005409!4.05e-08!59;UBERON:0001242!7.40e-08!13;UBERON:0000060!7.40e-08!13;UBERON:0001262!7.40e-08!13;UBERON:0004786!7.40e-08!13;UBERON:0004119!9.20e-07!130;UBERON:0000925!9.20e-07!130;UBERON:0006595!9.20e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.78e-13,31;UBERON:0005409,4.94e-11,47;UBERON:0000344,6.54e-09,15;UBERON:0004119,5.90e-08,118;UBERON:0000925,5.90e-08,118;UBERON:0006595,5.90e-08,118;UBERON:0001242,7.40e-08,13;UBERON:0001262,7.40e-08,13;UBERON:0004786,7.40e-08,13;UBERON:0005256,9.15e-08,45;UBERON:0003104,9.81e-08,61;UBERON:0009142,9.81e-08,61;UBERON:0001007,1.67e-07,116;UBERON:0001555,1.67e-07,116;UBERON:0007026,1.67e-07,116;UBERON:0004921,7.96e-07,114|phase1_expression=34.9124486688451,352.465161715755,351.714412048111,407.4192926303,308.050873917004,108.617888926993,115.171031813594,11.3628524628587,11.2630977721333,10.5329036844897,0.34243593645101,0,11.8128503652532,9.9659258757657,7.32841475994458,6.68168382386426,4.19737126876888,21.293696161681,31.9476630301371,28.00971701867,36.9938312157154,3.57447424323187,0,235.348853929101,178.939239232393,415.743942019275,309.287113242216,288.731451799091,544.607120161968,446.849420064357,182.484210269316,1.27006134691926,1.23012957516914,15.8481681015439,53.1486980342345,52.1976786425666,42.4672261025728,135.604248358758,77.3521991078562,110.463509978471,153.528418376095,145.488688296149,133.515347083567,59.5491949024481,59.7110124882941,38.7283647061148,12.5182615095686,5.23260375313072,8.12838876117546,16.5265414213141,13.1587236327841,1.43752564364972,25.8385213328914,21.7608642603403,29.9123481236793,19.0371982666601,34.097479352712,38.1597348285307,2.02316460859598,2.64495489636016,0.633831403506179,5.76035704517525,9.78224275722253,36.4459385498967,65.2651799294203,34.8135256323589,10.1864037576258,9.98967593836042,2.17748185847803,2.43010688997043,1.05162480675691,8.2838785477103,15.0190607847097,1.10241719293459,0.958454710182364,2.75765635983006,42.9451935897616,23.111408193419,26.5739302533301,1.84640802822271,1.55528994124096,2.6045668527838,25.1264699101243,34.3285192119325,30.1012548120316,12.9636577608414,12.9558229527184,5.03278503728312,8.10270268665069,21.9157524309678,79.7127343929614,171.224351519296,78.1967033763913,167.307989407723,296.947822773585,291.665503500365,107.580425820922,23.68981483835,42.8646907594733,27.2071472372962,58.5908626270991,43.6310023208681,28.028576367731,7.11066703153331,21.6491041011214,21.2822286999083,14.6602089054287,181.552368753305,33.4029869904852,25.383605780085,8.84775166507293,19.7902560902892,17.7573932887165,25.4721262533932,33.3951928265402,19.6039882474294,82.0687292878121,34.1254482330991,38.0382537338446,11.4854463462661,12.8088080707028,13.5765070877862,137.92990330141,10.8328894894272,9.63454851341893,275.127248459653,46.0090078102734,34.1944556666242,48.6678969689838,19.9221550408414,20.5875271268382,2.01046963380583,13.5582969749976,15.0872119824895,20.778804455956,20.1179166204019,29.8389336081427,27.7427544460507,25.7777213602348,2469.74562068366,7.93734702072493,10.1156925950728,10.0834792690996,14.6183673300644,12.9949713379036,12.811372028485,13.8678552348399,401.507631386952,5.38919982332106,3.9712276835242,4.39877810409872,7.45265490253754,9.17555922444473,13.2335823278423,18.9319565495308,25.2773518859486,42.1327912387941,69.7412828280878,59.1060078742833,12.8417978972011,12.8989332989603,12.244220179349,14.4414288706978,14.7573173810553,14.1925743856388,11.39416329277,13.413670069981,19.0327508058486,9.87359099480883,16.2525789438304,21.0778904819225,28.9475975102158,21.0768110679409,30.8674763148855,15.7717461423095,3.91037527041281,916.251285214072,379.486563162186,11.0909890278322,11.8440702648824,17.5259747398047,38.3198696784351,51.8140842158548,74.3782198100106,344.508098681315,290.693655087879,208.356888095423,224.422900462418,192.81948216081,295.711585447239,317.722933315801,400.672241787787,7.96605184002943,17.5942709418982,22.5415471346161,19.5505274731502,33.7477327671669,31.1403040313014,28.2034955574188,43.6926038019622,46.7856208967297,55.4053266008884,246.352133109421,5.6727335943472,7.46924181430171,11.2431056192427,12.3744674046987,20.9824128984603,29.2819729548633,48.620647229187,183.86134716289,84.8394766751172,234.342176639588,149.972801910407,161.011439327113,147.000906965219,135.983239449609,166.925458391725,68.9129399321435,8.7166049414423,11.2445833744998,10.1847051465113,18.3058393665032,24.4559135865051,37.8489389008762,46.2466745422983,31.369393677132,34.1055622059113,28.5424035896902,52.4362607090362,51.4601245960369,80.5695256299019,188.48910492409,106.061608344648,35.8987919303896,43.5980059161477,21.3532284683763,25.9037827368769,14.5902101385241,20.1976741763498,20.8235424814729,21.0836921920185,24.5582673415391,15.7719406648684,14.4819138153556,11.6061377623421,18.6212922770451,18.9966307642353,16.9973744517005,33.4174169078679,49.9629099933106,28.4904965867608,31.4371831552402,48.8311563998705,18.5843193675948,9.22566417388929,9.67435382287203,15.8428266994954,11.5167738223501,19.0609791725235,64.0902167057188,15.6319503675327,17.1118741624666,15.1697643809192,15.8127912862498,14.4389760547462,20.7668159509811,8.10274923140896,8.92574918101006,10.7168517515796,15.4286003268778,15.5180871313801,12.8348236069654,22.5304062344803,36.6087864579388,80.4961869282517,66.1585194164886,19.6214641000361,18.2454802166373,8.26287071515735,8.23669173621642,7.71462228801788,337.826289653997,26.3303928854924,15.8909919142003,19.6067524565061,23.3345104485837,11.8672127912955,11.6190093562871,9.60868327467395,35.8654487287035,42.965095863363,39.1105925866519,147.973945792343,6.32671987162271,11.7925290933572,20.1969987336768,25.2996838177507,37.1216358368502,72.2872896622639,93.3984049696296,100.514281721867,124.819219279997,17.3975007664339,3.38215763210514,17.6429524331895,15.3876396125101,16.9172533859321,22.8612887555584,24.8365504471444,33.3294557753941,15.624526181274,16.672635763688,12.8039584037783,12.0972602628303,12.0084225838708,10.3389859797984,10.1683847593179,8.70469513951227,5.54982756569192,5.96044064343795,5.4087952283986,4.87375439676105,6.15895344683701,6.24895814570999,6.55370203389463,7.21188317474168,6.15755786498109,12.0383209247016,10.6563280299149,2.21985953374065,2.6017018416748,2.01461539636894,65.4912723769126,112.046437844356,121.978981761999,27.4391525221204,108.841146575674,10.1655331671072,13.3494318587081,9.16632821503035,11.5141632170271,10.2762377965596,18.1294535373528,10.8003600037089,13.5096360967266,13.5942722695261,13.9795284172991,1.66059756134683,3.59122386060928,6.65861062441123,11.4260157022098,6.07878171621149,8.64064489715066,20.8911924133518,14.6284890639615,16.0459604795908,16.172621552883,19.5179060915485,14.5242282867279,17.1363958669885,15.9422629488125,12.5209322323237,14.7651044297753,12.6313915279892,11.9603716687497,16.071350131329,18.2526660966653,16.4577241144999,14.730491911225,13.8292990169446,18.7496877455704,15.6221571489449,14.8075563810434,15.7318056670584,12.8904158604543,15.2100607507365,18.5176949647054,14.4734722111492,11.1310065084387,17.5969348562966,11.4653262477615,16.397061933397,6.99469618226249,23.1592292360954,43.8336950258529,24.484906504812,18.9708620442783,17.3900876715316|short_description=p1@Hsd17b11}} | ||
|EntrezGene=114664 | |||
|HGNC= | |||
|MCL_coexpression_id=1326 | |||
|UniProt=Q9EQ06 | |||
|association_with_transcript=0bp_to_ENSMUST00000119025_5end | |||
|description=CAGE_peak_1_at_Hsd17b11_5end | |||
|id=chr5:104450818..104450884,- | |||
|ontology_enrichment_celltype=CL:0000066!4.44e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.44e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.54e-09!15;UBERON:0000160!8.46e-09!43;UBERON:0005256!3.34e-08!47;UBERON:0005409!4.05e-08!59;UBERON:0001242!7.40e-08!13;UBERON:0000060!7.40e-08!13;UBERON:0001262!7.40e-08!13;UBERON:0004786!7.40e-08!13;UBERON:0004119!9.20e-07!130;UBERON:0000925!9.20e-07!130;UBERON:0006595!9.20e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.78e-13,31;UBERON:0005409,4.94e-11,47;UBERON:0000344,6.54e-09,15;UBERON:0004119,5.90e-08,118;UBERON:0000925,5.90e-08,118;UBERON:0006595,5.90e-08,118;UBERON:0001242,7.40e-08,13;UBERON:0001262,7.40e-08,13;UBERON:0004786,7.40e-08,13;UBERON:0005256,9.15e-08,45;UBERON:0003104,9.81e-08,61;UBERON:0009142,9.81e-08,61;UBERON:0001007,1.67e-07,116;UBERON:0001555,1.67e-07,116;UBERON:0007026,1.67e-07,116;UBERON:0004921,7.96e-07,114 | |||
|phase1_expression=34.9124486688451,352.465161715755,351.714412048111,407.4192926303,308.050873917004,108.617888926993,115.171031813594,11.3628524628587,11.2630977721333,10.5329036844897,0.34243593645101,0,11.8128503652532,9.9659258757657,7.32841475994458,6.68168382386426,4.19737126876888,21.293696161681,31.9476630301371,28.00971701867,36.9938312157154,3.57447424323187,0,235.348853929101,178.939239232393,415.743942019275,309.287113242216,288.731451799091,544.607120161968,446.849420064357,182.484210269316,1.27006134691926,1.23012957516914,15.8481681015439,53.1486980342345,52.1976786425666,42.4672261025728,135.604248358758,77.3521991078562,110.463509978471,153.528418376095,145.488688296149,133.515347083567,59.5491949024481,59.7110124882941,38.7283647061148,12.5182615095686,5.23260375313072,8.12838876117546,16.5265414213141,13.1587236327841,1.43752564364972,25.8385213328914,21.7608642603403,29.9123481236793,19.0371982666601,34.097479352712,38.1597348285307,2.02316460859598,2.64495489636016,0.633831403506179,5.76035704517525,9.78224275722253,36.4459385498967,65.2651799294203,34.8135256323589,10.1864037576258,9.98967593836042,2.17748185847803,2.43010688997043,1.05162480675691,8.2838785477103,15.0190607847097,1.10241719293459,0.958454710182364,2.75765635983006,42.9451935897616,23.111408193419,26.5739302533301,1.84640802822271,1.55528994124096,2.6045668527838,25.1264699101243,34.3285192119325,30.1012548120316,12.9636577608414,12.9558229527184,5.03278503728312,8.10270268665069,21.9157524309678,79.7127343929614,171.224351519296,78.1967033763913,167.307989407723,296.947822773585,291.665503500365,107.580425820922,23.68981483835,42.8646907594733,27.2071472372962,58.5908626270991,43.6310023208681,28.028576367731,7.11066703153331,21.6491041011214,21.2822286999083,14.6602089054287,181.552368753305,33.4029869904852,25.383605780085,8.84775166507293,19.7902560902892,17.7573932887165,25.4721262533932,33.3951928265402,19.6039882474294,82.0687292878121,34.1254482330991,38.0382537338446,11.4854463462661,12.8088080707028,13.5765070877862,137.92990330141,10.8328894894272,9.63454851341893,275.127248459653,46.0090078102734,34.1944556666242,48.6678969689838,19.9221550408414,20.5875271268382,2.01046963380583,13.5582969749976,15.0872119824895,20.778804455956,20.1179166204019,29.8389336081427,27.7427544460507,25.7777213602348,2469.74562068366,7.93734702072493,10.1156925950728,10.0834792690996,14.6183673300644,12.9949713379036,12.811372028485,13.8678552348399,401.507631386952,5.38919982332106,3.9712276835242,4.39877810409872,7.45265490253754,9.17555922444473,13.2335823278423,18.9319565495308,25.2773518859486,42.1327912387941,69.7412828280878,59.1060078742833,12.8417978972011,12.8989332989603,12.244220179349,14.4414288706978,14.7573173810553,14.1925743856388,11.39416329277,13.413670069981,19.0327508058486,9.87359099480883,16.2525789438304,21.0778904819225,28.9475975102158,21.0768110679409,30.8674763148855,15.7717461423095,3.91037527041281,916.251285214072,379.486563162186,11.0909890278322,11.8440702648824,17.5259747398047,38.3198696784351,51.8140842158548,74.3782198100106,344.508098681315,290.693655087879,208.356888095423,224.422900462418,192.81948216081,295.711585447239,317.722933315801,400.672241787787,7.96605184002943,17.5942709418982,22.5415471346161,19.5505274731502,33.7477327671669,31.1403040313014,28.2034955574188,43.6926038019622,46.7856208967297,55.4053266008884,246.352133109421,5.6727335943472,7.46924181430171,11.2431056192427,12.3744674046987,20.9824128984603,29.2819729548633,48.620647229187,183.86134716289,84.8394766751172,234.342176639588,149.972801910407,161.011439327113,147.000906965219,135.983239449609,166.925458391725,68.9129399321435,8.7166049414423,11.2445833744998,10.1847051465113,18.3058393665032,24.4559135865051,37.8489389008762,46.2466745422983,31.369393677132,34.1055622059113,28.5424035896902,52.4362607090362,51.4601245960369,80.5695256299019,188.48910492409,106.061608344648,35.8987919303896,43.5980059161477,21.3532284683763,25.9037827368769,14.5902101385241,20.1976741763498,20.8235424814729,21.0836921920185,24.5582673415391,15.7719406648684,14.4819138153556,11.6061377623421,18.6212922770451,18.9966307642353,16.9973744517005,33.4174169078679,49.9629099933106,28.4904965867608,31.4371831552402,48.8311563998705,18.5843193675948,9.22566417388929,9.67435382287203,15.8428266994954,11.5167738223501,19.0609791725235,64.0902167057188,15.6319503675327,17.1118741624666,15.1697643809192,15.8127912862498,14.4389760547462,20.7668159509811,8.10274923140896,8.92574918101006,10.7168517515796,15.4286003268778,15.5180871313801,12.8348236069654,22.5304062344803,36.6087864579388,80.4961869282517,66.1585194164886,19.6214641000361,18.2454802166373,8.26287071515735,8.23669173621642,7.71462228801788,337.826289653997,26.3303928854924,15.8909919142003,19.6067524565061,23.3345104485837,11.8672127912955,11.6190093562871,9.60868327467395,35.8654487287035,42.965095863363,39.1105925866519,147.973945792343,6.32671987162271,11.7925290933572,20.1969987336768,25.2996838177507,37.1216358368502,72.2872896622639,93.3984049696296,100.514281721867,124.819219279997,17.3975007664339,3.38215763210514,17.6429524331895,15.3876396125101,16.9172533859321,22.8612887555584,24.8365504471444,33.3294557753941,15.624526181274,16.672635763688,12.8039584037783,12.0972602628303,12.0084225838708,10.3389859797984,10.1683847593179,8.70469513951227,5.54982756569192,5.96044064343795,5.4087952283986,4.87375439676105,6.15895344683701,6.24895814570999,6.55370203389463,7.21188317474168,6.15755786498109,12.0383209247016,10.6563280299149,2.21985953374065,2.6017018416748,2.01461539636894,65.4912723769126,112.046437844356,121.978981761999,27.4391525221204,108.841146575674,10.1655331671072,13.3494318587081,9.16632821503035,11.5141632170271,10.2762377965596,18.1294535373528,10.8003600037089,13.5096360967266,13.5942722695261,13.9795284172991,1.66059756134683,3.59122386060928,6.65861062441123,11.4260157022098,6.07878171621149,8.64064489715066,20.8911924133518,14.6284890639615,16.0459604795908,16.172621552883,19.5179060915485,14.5242282867279,17.1363958669885,15.9422629488125,12.5209322323237,14.7651044297753,12.6313915279892,11.9603716687497,16.071350131329,18.2526660966653,16.4577241144999,14.730491911225,13.8292990169446,18.7496877455704,15.6221571489449,14.8075563810434,15.7318056670584,12.8904158604543,15.2100607507365,18.5176949647054,14.4734722111492,11.1310065084387,17.5969348562966,11.4653262477615,16.397061933397,6.99469618226249,23.1592292360954,43.8336950258529,24.484906504812,18.9708620442783,17.3900876715316 | |||
|short_description=p1@Hsd17b11 | |||
}} |
Revision as of 05:46, 14 September 2013
Short description: | p1@Hsd17b11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hsd17b11_5end |
Coexpression cluster: | MCL_coexpression_mm9:1326 |
Association with transcript: | 0bp_to_ENSMUST00000119025_5end |
EntrezGene: | Hsd17b11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.44e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.78e-13 | 31 |
gastrointestinal system | 4.94e-11 | 47 |
mucosa | 6.54e-09 | 15 |
endoderm-derived structure | 5.90e-08 | 118 |
endoderm | 5.90e-08 | 118 |
presumptive endoderm | 5.90e-08 | 118 |
intestinal mucosa | 7.40e-08 | 13 |
wall of intestine | 7.40e-08 | 13 |
gastrointestinal system mucosa | 7.40e-08 | 13 |
trunk mesenchyme | 9.15e-08 | 45 |
mesenchyme | 9.81e-08 | 61 |
entire embryonic mesenchyme | 9.81e-08 | 61 |
digestive system | 1.67e-07 | 116 |
digestive tract | 1.67e-07 | 116 |
primitive gut | 1.67e-07 | 116 |
subdivision of digestive tract | 7.96e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.