FFCP PHASE1:Mm9::chr5:106129901..106129912,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=231549|HGNC=|MCL_coexpression_id=6|UniProt=|association_with_transcript=16bp_to_ENSMUST00000135776_5end|description=CAGE_peak_14_at_Lrrc8d_5end|id=chr5:106129901..106129912,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.64e-12,3;DOID:4045,1.64e-12,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.50e-09,14;UBERON:0003918,3.50e-09,14;UBERON:0011143,3.50e-09,14;UBERON:0005095,3.50e-09,14;UBERON:0007687,3.50e-09,14;UBERON:0006554,5.11e-07,18|phase1_expression=0,0,0,1.51232105653415,1.00179145989269,0.33575854382378,0,0.387369970324729,0.281577444303333,0.468129052643987,0,0.159544317990673,0.171200729931206,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.332469290716985,0,1.67412652294763,4.6880120671428,3.66466620781659,17.0587131528994,2.04913645487534,5.82612423637384,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0,0.479260498023681,0,1.90605340609597,0,0,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0,0.252722758433675,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,1.02939162845886,3.40996199274711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0.597423819763102,0.189667900953082,0.228497025219458,2.25415471346161,0.814605311381257,1.35766741017338,0.49095073923223,1.70738650235495,1.91893192373483,1.8839847340965,1.48076596706161,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.604647113929502,0.943025398779491,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,1.01987057996313,1.11961161858926,2.21119958087078,0,0.158167996790568,0,0,0.209088296014469,0,0.269728692769641,0.495920734352016,0.26175594198403,0,3.10669656543463,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.5208175393758,0.104859344425711,0.724752362478018,0,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p14@Lrrc8d}} | ||
|EntrezGene=231549 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt= | |||
|association_with_transcript=16bp_to_ENSMUST00000135776_5end | |||
|description=CAGE_peak_14_at_Lrrc8d_5end | |||
|id=chr5:106129901..106129912,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.64e-12,3;DOID:4045,1.64e-12,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.50e-09,14;UBERON:0003918,3.50e-09,14;UBERON:0011143,3.50e-09,14;UBERON:0005095,3.50e-09,14;UBERON:0007687,3.50e-09,14;UBERON:0006554,5.11e-07,18 | |||
|phase1_expression=0,0,0,1.51232105653415,1.00179145989269,0.33575854382378,0,0.387369970324729,0.281577444303333,0.468129052643987,0,0.159544317990673,0.171200729931206,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.332469290716985,0,1.67412652294763,4.6880120671428,3.66466620781659,17.0587131528994,2.04913645487534,5.82612423637384,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0,0.479260498023681,0,1.90605340609597,0,0,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0,0.252722758433675,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,1.02939162845886,3.40996199274711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0.597423819763102,0.189667900953082,0.228497025219458,2.25415471346161,0.814605311381257,1.35766741017338,0.49095073923223,1.70738650235495,1.91893192373483,1.8839847340965,1.48076596706161,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.604647113929502,0.943025398779491,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,1.01987057996313,1.11961161858926,2.21119958087078,0,0.158167996790568,0,0,0.209088296014469,0,0.269728692769641,0.495920734352016,0.26175594198403,0,3.10669656543463,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.5208175393758,0.104859344425711,0.724752362478018,0,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p14@Lrrc8d | |||
}} |
Revision as of 05:49, 14 September 2013
Short description: | p14@Lrrc8d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Lrrc8d_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 16bp_to_ENSMUST00000135776_5end |
EntrezGene: | Lrrc8d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.50e-09 | 14 |
kidney mesenchyme | 3.50e-09 | 14 |
upper urinary tract | 3.50e-09 | 14 |
kidney rudiment | 3.50e-09 | 14 |
kidney field | 3.50e-09 | 14 |
urinary system structure | 5.11e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.64e-12 | 3 |
muscle cancer | 1.64e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.