FFCP PHASE1:Mm9::chr5:109204040..109204051,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=70|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:109204040..109204051,-|id=chr5:109204040..109204051,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004176!1.05e-45!17;UBERON:0009196!1.05e-45!17;UBERON:0009117!1.05e-45!17;UBERON:0000991!4.59e-43!18;UBERON:0005564!4.59e-43!18;UBERON:0000473!2.58e-33!14;UBERON:0003133!7.87e-32!24;UBERON:0003135!5.29e-31!15;UBERON:0005156!3.10e-29!26;UBERON:0000990!3.10e-29!26;UBERON:0003101!5.58e-29!16;UBERON:0000079!5.58e-29!16;UBERON:0002323!5.82e-20!37;UBERON:0004458!5.82e-20!37;UBERON:0003886!2.20e-19!38;UBERON:0002553!7.78e-19!39;UBERON:0000992!2.07e-14!3;UBERON:0000464!3.04e-12!57;UBERON:0000466!3.00e-08!79|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.47e-44,14;UBERON:0003135,3.03e-41,15;UBERON:0003101,1.14e-38,16;UBERON:0000079,1.14e-38,16;UBERON:0004176,2.13e-36,17;UBERON:0009196,2.13e-36,17;UBERON:0009117,2.13e-36,17;UBERON:0000991,2.24e-34,18;UBERON:0005564,2.24e-34,18;UBERON:0003133,8.87e-26,24;UBERON:0005156,8.62e-24,26;UBERON:0000990,8.62e-24,26;UBERON:0002323,1.11e-16,37;UBERON:0004458,1.11e-16,37;UBERON:0003886,3.07e-16,38;UBERON:0002553,8.08e-16,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81846469342095,0,0.165458490457098,2.91676782516071,1.29159823477731,1.18269287843545,2.22978753426933,0.39061315453185,3.35549902162275,8.69702834973622,4.60848010012585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr5:109204040..109204051,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:109204040..109204051,- | |||
|id=chr5:109204040..109204051,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!1.05e-45!17;UBERON:0009196!1.05e-45!17;UBERON:0009117!1.05e-45!17;UBERON:0000991!4.59e-43!18;UBERON:0005564!4.59e-43!18;UBERON:0000473!2.58e-33!14;UBERON:0003133!7.87e-32!24;UBERON:0003135!5.29e-31!15;UBERON:0005156!3.10e-29!26;UBERON:0000990!3.10e-29!26;UBERON:0003101!5.58e-29!16;UBERON:0000079!5.58e-29!16;UBERON:0002323!5.82e-20!37;UBERON:0004458!5.82e-20!37;UBERON:0003886!2.20e-19!38;UBERON:0002553!7.78e-19!39;UBERON:0000992!2.07e-14!3;UBERON:0000464!3.04e-12!57;UBERON:0000466!3.00e-08!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.47e-44,14;UBERON:0003135,3.03e-41,15;UBERON:0003101,1.14e-38,16;UBERON:0000079,1.14e-38,16;UBERON:0004176,2.13e-36,17;UBERON:0009196,2.13e-36,17;UBERON:0009117,2.13e-36,17;UBERON:0000991,2.24e-34,18;UBERON:0005564,2.24e-34,18;UBERON:0003133,8.87e-26,24;UBERON:0005156,8.62e-24,26;UBERON:0000990,8.62e-24,26;UBERON:0002323,1.11e-16,37;UBERON:0004458,1.11e-16,37;UBERON:0003886,3.07e-16,38;UBERON:0002553,8.08e-16,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81846469342095,0,0.165458490457098,2.91676782516071,1.29159823477731,1.18269287843545,2.22978753426933,0.39061315453185,3.35549902162275,8.69702834973622,4.60848010012585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:109204040..109204051,- | |||
}} |
Revision as of 05:54, 14 September 2013
Short description: | p@chr5:109204040..109204051, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:109204040..109204051, - |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.47e-44 | 14 |
male reproductive organ | 3.03e-41 | 15 |
male organism | 1.14e-38 | 16 |
male reproductive system | 1.14e-38 | 16 |
external genitalia | 2.13e-36 | 17 |
indifferent external genitalia | 2.13e-36 | 17 |
indifferent gonad | 2.13e-36 | 17 |
gonad | 2.24e-34 | 18 |
gonad primordium | 2.24e-34 | 18 |
reproductive organ | 8.87e-26 | 24 |
reproductive structure | 8.62e-24 | 26 |
reproductive system | 8.62e-24 | 26 |
body cavity | 1.11e-16 | 37 |
body cavity or lining | 1.11e-16 | 37 |
body cavity precursor | 3.07e-16 | 38 |
anatomical cavity | 8.08e-16 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.