FFCP PHASE1:Mm9::chr5:110759775..110759786,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18973|HGNC=|MCL_coexpression_id=58|UniProt=E9QAP6,Q3TBY2|association_with_transcript=59bp_to_ENSMUST00000112481,uc008yqo.2_5end|description=CAGE_peak_3_at_Pole_5end|id=chr5:110759775..110759786,+|ontology_enrichment_celltype=CL:0000473!1.07e-07!3;CL:0000627!1.07e-07!3;CL:0000682!1.07e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,7.81e-25,3;CL:0000239,2.07e-12,6;CL:0000677,2.07e-12,6;CL:0000584,2.07e-12,6;CL:0000066,2.51e-11,25;CL:0000473,4.98e-11,7;CL:0000075,1.00e-10,7;CL:0002563,1.79e-08,9;CL:0002251,1.79e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!2.81e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.91e-19,15;UBERON:0001962,3.95e-17,2;UBERON:0001961,3.95e-17,2;UBERON:0001744,3.95e-17,2;UBERON:0004923,8.35e-12,24;UBERON:0002465,9.49e-12,3;UBERON:0001242,4.54e-10,13;UBERON:0001262,4.54e-10,13;UBERON:0004786,4.54e-10,13;UBERON:0006834,1.19e-09,1;UBERON:0003199,1.73e-09,1;UBERON:0003350,1.79e-08,9;UBERON:0004808,1.79e-08,9;UBERON:0001277,1.79e-08,9;UBERON:0000485,4.97e-07,11|phase1_expression=0,0.697950815278722,2.27499619694768,0,0,1.51091344720701,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.55987876469451,2.98232065387321,1.14846392823004,5.59990595006797,3.66301095566011,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.442830443938806,0.627994911365499,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0.509935289981566,0.979660166265606,1.24379976423981,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94133198447482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0|short_description=p3@Pole}} | ||
|EntrezGene=18973 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=E9QAP6,Q3TBY2 | |||
|association_with_transcript=59bp_to_ENSMUST00000112481,uc008yqo.2_5end | |||
|description=CAGE_peak_3_at_Pole_5end | |||
|id=chr5:110759775..110759786,+ | |||
|ontology_enrichment_celltype=CL:0000473!1.07e-07!3;CL:0000627!1.07e-07!3;CL:0000682!1.07e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.81e-25,3;CL:0000239,2.07e-12,6;CL:0000677,2.07e-12,6;CL:0000584,2.07e-12,6;CL:0000066,2.51e-11,25;CL:0000473,4.98e-11,7;CL:0000075,1.00e-10,7;CL:0002563,1.79e-08,9;CL:0002251,1.79e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.81e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.91e-19,15;UBERON:0001962,3.95e-17,2;UBERON:0001961,3.95e-17,2;UBERON:0001744,3.95e-17,2;UBERON:0004923,8.35e-12,24;UBERON:0002465,9.49e-12,3;UBERON:0001242,4.54e-10,13;UBERON:0001262,4.54e-10,13;UBERON:0004786,4.54e-10,13;UBERON:0006834,1.19e-09,1;UBERON:0003199,1.73e-09,1;UBERON:0003350,1.79e-08,9;UBERON:0004808,1.79e-08,9;UBERON:0001277,1.79e-08,9;UBERON:0000485,4.97e-07,11 | |||
|phase1_expression=0,0.697950815278722,2.27499619694768,0,0,1.51091344720701,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.55987876469451,2.98232065387321,1.14846392823004,5.59990595006797,3.66301095566011,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.442830443938806,0.627994911365499,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0.509935289981566,0.979660166265606,1.24379976423981,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94133198447482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p3@Pole | |||
}} |
Revision as of 05:55, 14 September 2013
Short description: | p3@Pole |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pole_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 59bp_to_ENSMUST00000112481, uc008yqo.2_5end |
EntrezGene: | Pole |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.81e-25 | 3 |
brush border epithelial cell | 2.07e-12 | 6 |
gut absorptive cell | 2.07e-12 | 6 |
enterocyte | 2.07e-12 | 6 |
epithelial cell | 2.51e-11 | 25 |
defensive cell | 4.98e-11 | 7 |
columnar/cuboidal epithelial cell | 1.00e-10 | 7 |
intestinal epithelial cell | 1.79e-08 | 9 |
epithelial cell of alimentary canal | 1.79e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.91e-19 | 15 |
gut-associated lymphoid tissue | 3.95e-17 | 2 |
mucosa-associated lymphoid tissue | 3.95e-17 | 2 |
lymphoid tissue | 3.95e-17 | 2 |
organ component layer | 8.35e-12 | 24 |
lymphoid system | 9.49e-12 | 3 |
intestinal mucosa | 4.54e-10 | 13 |
wall of intestine | 4.54e-10 | 13 |
gastrointestinal system mucosa | 4.54e-10 | 13 |
uterus or analog | 1.19e-09 | 1 |
egg chamber | 1.73e-09 | 1 |
epithelium of mucosa | 1.79e-08 | 9 |
gastrointestinal system epithelium | 1.79e-08 | 9 |
intestinal epithelium | 1.79e-08 | 9 |
simple columnar epithelium | 4.97e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.