FFCP PHASE1:Mm9::chr5:34512058..34512115,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=272158,231123|HGNC=|MCL_coexpression_id=364|UniProt=Q7TQ07,Q8QZX2,E9Q0V7|association_with_transcript=0bp_to_ENSMUST00000042954,ENSMUST00000060049,ENSMUST00000101332,ENSMUST00000101334,NM_146159,NM_181857,uc008xbt.1,uc008xbu.1,uc008xbv.1,uc008xbw.1,uc012dux.1_5end|description=CAGE_peak_1_at_Haus3_5end,CAGE_peak_1_at_Poln_5end|id=chr5:34512058..34512115,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!4.33e-08!147;UBERON:0004177!6.11e-08!29;UBERON:0005057!6.77e-07!51;UBERON:0002390!7.19e-07!45;UBERON:0003061!7.19e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0001048,8.18e-09,134;UBERON:0004177,5.94e-08,29;UBERON:0005057,5.94e-08,29;UBERON:0002390,7.04e-07,45;UBERON:0003061,7.04e-07,45|phase1_expression=9.60893082628764,2.44282785347553,3.18499467572675,4.83942738090928,0.500895729946347,5.87577451691614,6.77476657727024,20.9179783975354,23.0893504328733,20.8317428426574,16.608142917874,17.6296471379693,24.995306569956,21.7676802023304,25.3163418979904,41.912380349694,38.4759032970481,26.3410908074128,25.3661702170617,20.7950929381035,17.6039610612714,37.1348157491311,36.306770690312,6.23970448894286,6.19405058881359,2.29692785646008,3.4460959692726,3.878482188346,5.51067916423484,6.5527833737582,6.20845429834853,9.52546010189447,7.99584223859941,0,9.24325183204079,19.2832188615851,10.8209758819056,21.3451131675823,18.7520482685712,19.3703785270305,16.4704816648684,21.8574555186703,19.4204141212461,11.2048167998264,6.89363132292699,8.25960384727567,5.47673941043627,3.2703773457067,1.75748946187577,3.69416808241138,2.79972843250725,2.87505128729943,43.4556949689537,31.9159342484992,38.3146931022409,11.3194151855817,9.16907007804022,7.73508138416164,3.43937983461316,1.5869729378161,0.633831403506179,0.677689064138264,2.66788438833342,1.7997994345628,1.97773272513395,3.5524005747305,1.49800055259202,4.99483796918021,5.70292867696627,3.37514845829227,3.36519938162211,3.14216082844184,4.41737081903227,5.87955836231779,3.25874601462004,3.67687514644008,3.30347642998166,10.0872997087298,7.0659005297872,1.97829431595291,2.28719109006024,2.6045668527838,6.70039197603314,11.2552522006336,7.63991238884051,5.59794312399969,10.5355043791336,4.28718725398191,18.098560206631,33.3270580070924,13.0439019915755,9.46466264679525,7.47968467078526,4.85732872474035,3.24888208723835,3.13618820968135,10.3928870897496,13.8048561288227,8.05336614268893,7.77347063922748,6.19711047017394,10.2661181931454,0,0,11.6905162146056,21.5355885653834,13.1436355703844,8.10705546005326,52.823328264023,9.50029690014878,14.3992821215893,11.5696881758614,11.761390360059,12.6607018064203,14.6985883919631,9.42499434972566,4.94389935468748,15.0383331196708,38.9228642857945,17.4708197943202,22.7466764014205,30.0622656943838,16.775258509631,27.2286141220739,20.5257772677186,9.96282515313506,38.7002852154123,54.5911485204001,31.8946269953392,16.6267609739353,7.77751024791665,8.92145900001337,12.3415267336516,12.7857728665165,11.0127663616567,8.4365456795234,14.7667077582959,22.1444407685966,9.60346482047964,5.26104639716185,23.8120410621748,19.3117767724117,18.1862751103403,19.591626318643,19.3904022581284,21.1387638470002,14.8985742049969,10.8655415710387,12.9340795759705,26.6639573036625,24.8091085071168,13.8093311429372,19.1852601965663,13.9300866608867,17.9030458674911,20.1024609486678,56.1770549850588,47.3520149091076,40.6353804135697,21.7482061162277,22.045449638223,19.2666405763286,22.7274946161802,19.8731874064878,18.5120535464854,16.9749779667798,12.6088498657821,13.6615450569588,15.9623054416076,13.2975645904067,9.8903947645944,8.18719929581861,12.2948064562988,9.26024289446565,13.6688466566683,11.6282211988591,5.61711931072457,6.08236303326152,26.0211665652985,24.8493238890669,23.1961430379768,16.1346819698674,16.9007313322101,13.6962450801043,10.4396393539793,7.90554982675252,11.3100843960121,12.1363447945102,11.1129529657898,11.6846523125049,14.2651112917298,8.76221602319216,5.12103332573321,23.192448059775,16.9061603509621,16.0884548997798,14.5464365375719,14.3778430775153,11.4458132194906,5.31396532726568,8.94892748695836,7.03363834354263,8.30067355844017,33.8695564603671,32.0391162034521,41.3746286788131,40.1663040349236,33.2824480458335,27.7542178441748,21.8649064462616,18.321280625579,16.748246204473,31.629005436018,20.0956111740992,15.601883655728,12.8815227753027,16.6839594575378,6.75420929908714,13.6717360723287,27.8552375302613,35.6893298408037,28.6869194960068,24.1730955737157,18.9282070909252,9.99783291721258,6.24427673144956,20.3349335896986,14.8381342064679,7.81328366421687,9.01248230936559,11.9152637487468,8.96824163205372,12.0633027151418,4.89515115436839,8.85175691434265,9.3818493743609,16.8578119487182,18.8710815413447,26.7213960963981,11.6136626514012,22.4010835785542,26.9402733564681,22.6194567619439,28.1983181584011,23.171062104569,16.9845918473299,24.2886421004937,17.82760733259,26.4842811224171,9.63963949265421,15.8972895433261,8.01295216502649,20.1979829598434,9.40329700943452,6.63725691699814,17.9657670754686,17.8370898609203,14.7111962209601,3.2483208216885,10.4527950300935,12.9214146584111,16.3590178264877,20.3203505679291,11.0612865277536,9.48767477174989,6.18813259489121,5.10659408630682,17.6459872150684,1.55230420539305,11.3598628566744,17.3793428969428,12.3074484145429,11.0247843803421,1.8267896946876,13.6109590676952,5.71946591332314,5.07215315526412,14.0153315000258,17.5996225098537,19.5413876767225,16.592755816436,17.7272171724666,9.03590593552537,16.6882771809459,31.7819838284006,18.57481811669,31.6682641802207,40.1224813419992,43.605458643007,43.0102965628263,32.6358585588202,36.3873776041511,37.5903928748033,10.5013767981662,27.9957354319305,24.195016588095,22.2491002092911,15.4725339050707,11.7915784422936,13.4864346384821,10.7449492442937,5.49687478166462,8.55458823725833,10.5627683224777,49.6049786042087,29.4547595706638,15.5530981029672,17.1117045742762,15.1116993468945,20.9505595608565,25.4665207861286,28.3845558959811,37.8542233376816,65.4692967438476,52.1334311326736,37.289312234125,13.7853146397312,20.9530352616248,31.5707599836042,40.1019798295158,44.1072607614408,38.1019574978301,40.9099990273579,44.9300702269257,38.7892645873949,32.0627268735153,30.9916060752413,34.2514156239573,29.1023486432107,11.5632495643758,32.1879632392394,27.4524401224996,31.3944232600827,3.86379188064381,9.00875882165674,8.42497471629419,9.4322086794789,5.01572104035363,7.90652579663893,9.20650473014354,6.30185064783336,4.64003592327956,5.48066015816514,10.5755145634558,7.42524750254986,7.20513925158753,12.2348450425735,12.9440077937955,29.1642446711536,31.5229649986815,19.8050982674796,18.9623239313269,20.5420899375423,14.3397936591011,11.3345831178824,15.0405591784393,15.0832028508153,14.6564382823003,13.4344028941827,19.4285131627658,17.0427543595186,13.4452820050225,14.2439963009921,13.3362233559261,14.3696564171621,13.1178269915319,14.835092428919,16.1918812147837,14.057639347802,13.3106854619503,17.6442780561018,16.4241450794531,15.6221571489449,15.9075462836352,16.2805895856768,19.7302283578382,14.3952360676613,21.3234063229941,13.1684870117833,13.6921230502033,14.3230865109391,13.3245683419931,12.9247429357365,6.99469618226249,15.439486157397,11.3881658645598,9.94699326757986,13.0148937280514,22.02744438394|short_description=p1@Haus3,p1@Poln}} | ||
|EntrezGene=272158,231123 | |||
|HGNC= | |||
|MCL_coexpression_id=364 | |||
|UniProt=Q7TQ07,Q8QZX2,E9Q0V7 | |||
|association_with_transcript=0bp_to_ENSMUST00000042954,ENSMUST00000060049,ENSMUST00000101332,ENSMUST00000101334,NM_146159,NM_181857,uc008xbt.1,uc008xbu.1,uc008xbv.1,uc008xbw.1,uc012dux.1_5end | |||
|description=CAGE_peak_1_at_Haus3_5end,CAGE_peak_1_at_Poln_5end | |||
|id=chr5:34512058..34512115,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!4.33e-08!147;UBERON:0004177!6.11e-08!29;UBERON:0005057!6.77e-07!51;UBERON:0002390!7.19e-07!45;UBERON:0003061!7.19e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,8.18e-09,134;UBERON:0004177,5.94e-08,29;UBERON:0005057,5.94e-08,29;UBERON:0002390,7.04e-07,45;UBERON:0003061,7.04e-07,45 | |||
|phase1_expression=9.60893082628764,2.44282785347553,3.18499467572675,4.83942738090928,0.500895729946347,5.87577451691614,6.77476657727024,20.9179783975354,23.0893504328733,20.8317428426574,16.608142917874,17.6296471379693,24.995306569956,21.7676802023304,25.3163418979904,41.912380349694,38.4759032970481,26.3410908074128,25.3661702170617,20.7950929381035,17.6039610612714,37.1348157491311,36.306770690312,6.23970448894286,6.19405058881359,2.29692785646008,3.4460959692726,3.878482188346,5.51067916423484,6.5527833737582,6.20845429834853,9.52546010189447,7.99584223859941,0,9.24325183204079,19.2832188615851,10.8209758819056,21.3451131675823,18.7520482685712,19.3703785270305,16.4704816648684,21.8574555186703,19.4204141212461,11.2048167998264,6.89363132292699,8.25960384727567,5.47673941043627,3.2703773457067,1.75748946187577,3.69416808241138,2.79972843250725,2.87505128729943,43.4556949689537,31.9159342484992,38.3146931022409,11.3194151855817,9.16907007804022,7.73508138416164,3.43937983461316,1.5869729378161,0.633831403506179,0.677689064138264,2.66788438833342,1.7997994345628,1.97773272513395,3.5524005747305,1.49800055259202,4.99483796918021,5.70292867696627,3.37514845829227,3.36519938162211,3.14216082844184,4.41737081903227,5.87955836231779,3.25874601462004,3.67687514644008,3.30347642998166,10.0872997087298,7.0659005297872,1.97829431595291,2.28719109006024,2.6045668527838,6.70039197603314,11.2552522006336,7.63991238884051,5.59794312399969,10.5355043791336,4.28718725398191,18.098560206631,33.3270580070924,13.0439019915755,9.46466264679525,7.47968467078526,4.85732872474035,3.24888208723835,3.13618820968135,10.3928870897496,13.8048561288227,8.05336614268893,7.77347063922748,6.19711047017394,10.2661181931454,0,0,11.6905162146056,21.5355885653834,13.1436355703844,8.10705546005326,52.823328264023,9.50029690014878,14.3992821215893,11.5696881758614,11.761390360059,12.6607018064203,14.6985883919631,9.42499434972566,4.94389935468748,15.0383331196708,38.9228642857945,17.4708197943202,22.7466764014205,30.0622656943838,16.775258509631,27.2286141220739,20.5257772677186,9.96282515313506,38.7002852154123,54.5911485204001,31.8946269953392,16.6267609739353,7.77751024791665,8.92145900001337,12.3415267336516,12.7857728665165,11.0127663616567,8.4365456795234,14.7667077582959,22.1444407685966,9.60346482047964,5.26104639716185,23.8120410621748,19.3117767724117,18.1862751103403,19.591626318643,19.3904022581284,21.1387638470002,14.8985742049969,10.8655415710387,12.9340795759705,26.6639573036625,24.8091085071168,13.8093311429372,19.1852601965663,13.9300866608867,17.9030458674911,20.1024609486678,56.1770549850588,47.3520149091076,40.6353804135697,21.7482061162277,22.045449638223,19.2666405763286,22.7274946161802,19.8731874064878,18.5120535464854,16.9749779667798,12.6088498657821,13.6615450569588,15.9623054416076,13.2975645904067,9.8903947645944,8.18719929581861,12.2948064562988,9.26024289446565,13.6688466566683,11.6282211988591,5.61711931072457,6.08236303326152,26.0211665652985,24.8493238890669,23.1961430379768,16.1346819698674,16.9007313322101,13.6962450801043,10.4396393539793,7.90554982675252,11.3100843960121,12.1363447945102,11.1129529657898,11.6846523125049,14.2651112917298,8.76221602319216,5.12103332573321,23.192448059775,16.9061603509621,16.0884548997798,14.5464365375719,14.3778430775153,11.4458132194906,5.31396532726568,8.94892748695836,7.03363834354263,8.30067355844017,33.8695564603671,32.0391162034521,41.3746286788131,40.1663040349236,33.2824480458335,27.7542178441748,21.8649064462616,18.321280625579,16.748246204473,31.629005436018,20.0956111740992,15.601883655728,12.8815227753027,16.6839594575378,6.75420929908714,13.6717360723287,27.8552375302613,35.6893298408037,28.6869194960068,24.1730955737157,18.9282070909252,9.99783291721258,6.24427673144956,20.3349335896986,14.8381342064679,7.81328366421687,9.01248230936559,11.9152637487468,8.96824163205372,12.0633027151418,4.89515115436839,8.85175691434265,9.3818493743609,16.8578119487182,18.8710815413447,26.7213960963981,11.6136626514012,22.4010835785542,26.9402733564681,22.6194567619439,28.1983181584011,23.171062104569,16.9845918473299,24.2886421004937,17.82760733259,26.4842811224171,9.63963949265421,15.8972895433261,8.01295216502649,20.1979829598434,9.40329700943452,6.63725691699814,17.9657670754686,17.8370898609203,14.7111962209601,3.2483208216885,10.4527950300935,12.9214146584111,16.3590178264877,20.3203505679291,11.0612865277536,9.48767477174989,6.18813259489121,5.10659408630682,17.6459872150684,1.55230420539305,11.3598628566744,17.3793428969428,12.3074484145429,11.0247843803421,1.8267896946876,13.6109590676952,5.71946591332314,5.07215315526412,14.0153315000258,17.5996225098537,19.5413876767225,16.592755816436,17.7272171724666,9.03590593552537,16.6882771809459,31.7819838284006,18.57481811669,31.6682641802207,40.1224813419992,43.605458643007,43.0102965628263,32.6358585588202,36.3873776041511,37.5903928748033,10.5013767981662,27.9957354319305,24.195016588095,22.2491002092911,15.472533905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| |||
|short_description=p1@Haus3,p1@Poln | |||
}} | |||
Revision as of 07:30, 14 September 2013
| Short description: | p1@Haus3, p1@Poln |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Haus3_5end, CAGE_peak_1_at_Poln_5end |
| Coexpression cluster: | MCL_coexpression_mm9:364 |
| Association with transcript: | 0bp_to_ENSMUST00000042954, ENSMUST00000060049, ENSMUST00000101332, ENSMUST00000101334, NM_146159, NM_181857, uc008xbt.1, uc008xbu.1, uc008xbv.1, uc008xbw.1, uc012dux.1_5end |
| EntrezGene: | 272158,231123 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primordium | 8.18e-09 | 134 |
| hemopoietic organ | 5.94e-08 | 29 |
| immune organ | 5.94e-08 | 29 |
| hematopoietic system | 7.04e-07 | 45 |
| blood island | 7.04e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
