FFCP PHASE1:Mm9::chr5:36896690..36896700,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=945|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:36896690..36896700,-|id=chr5:36896690..36896700,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000625,1.86e-15,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!5.25e-16!23;UBERON:0000974!5.25e-16!23;UBERON:0004807!5.25e-16!23;UBERON:0005058!5.25e-16!23;UBERON:0003351!5.25e-16!23;UBERON:0009113!5.25e-16!23;UBERON:0003295!5.25e-16!23;UBERON:0009722!5.25e-16!23;UBERON:0005562!5.25e-16!23;UBERON:0007690!5.25e-16!23;UBERON:0006562!3.28e-15!24;UBERON:0003408!3.28e-15!24;UBERON:0001557!3.28e-15!24;UBERON:0001042!3.28e-15!24;UBERON:0008814!3.28e-15!24;UBERON:0009145!3.28e-15!24;UBERON:0004177!5.80e-14!29;UBERON:0000072!3.53e-13!27;UBERON:0000065!1.14e-11!41;UBERON:0001004!2.66e-11!42;UBERON:0002193!1.46e-09!48;UBERON:0000063!1.78e-09!35;UBERON:0001007!2.50e-08!128;UBERON:0001555!2.50e-08!128;UBERON:0007026!2.50e-08!128;UBERON:0004119!4.19e-08!130;UBERON:0000925!4.19e-08!130;UBERON:0006595!4.19e-08!130;UBERON:0002390!7.58e-08!45;UBERON:0003061!7.58e-08!45;UBERON:0004921!6.04e-07!126;UBERON:0004185!6.04e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.84e-11,23;UBERON:0000974,9.84e-11,23;UBERON:0004807,9.84e-11,23;UBERON:0005058,9.84e-11,23;UBERON:0003351,9.84e-11,23;UBERON:0009113,9.84e-11,23;UBERON:0003295,9.84e-11,23;UBERON:0009722,9.84e-11,23;UBERON:0005562,9.84e-11,23;UBERON:0007690,9.84e-11,23;UBERON:0006562,2.62e-10,24;UBERON:0003408,2.62e-10,24;UBERON:0001557,2.62e-10,24;UBERON:0001042,2.62e-10,24;UBERON:0008814,2.62e-10,24;UBERON:0009145,2.62e-10,24;UBERON:0000072,3.20e-09,27;UBERON:0004177,1.28e-08,29;UBERON:0005057,1.28e-08,29;UBERON:0000077,3.18e-07,35;UBERON:0007811,4.91e-07,36|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.171200729931206,0.786783621770977,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0.523523743973798,1.76469446409304,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0,0.537080087002444,0.79472541912506,0.360586348559907,0.590758108698309,0.605798699688886,0.609654453239999,1.71404514732629,0.974578807397524,1.82802499116626,1.98690733708667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:36896690..36896700,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=945 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:36896690..36896700,- | |||
|id=chr5:36896690..36896700,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.86e-15,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.25e-16!23;UBERON:0000974!5.25e-16!23;UBERON:0004807!5.25e-16!23;UBERON:0005058!5.25e-16!23;UBERON:0003351!5.25e-16!23;UBERON:0009113!5.25e-16!23;UBERON:0003295!5.25e-16!23;UBERON:0009722!5.25e-16!23;UBERON:0005562!5.25e-16!23;UBERON:0007690!5.25e-16!23;UBERON:0006562!3.28e-15!24;UBERON:0003408!3.28e-15!24;UBERON:0001557!3.28e-15!24;UBERON:0001042!3.28e-15!24;UBERON:0008814!3.28e-15!24;UBERON:0009145!3.28e-15!24;UBERON:0004177!5.80e-14!29;UBERON:0000072!3.53e-13!27;UBERON:0000065!1.14e-11!41;UBERON:0001004!2.66e-11!42;UBERON:0002193!1.46e-09!48;UBERON:0000063!1.78e-09!35;UBERON:0001007!2.50e-08!128;UBERON:0001555!2.50e-08!128;UBERON:0007026!2.50e-08!128;UBERON:0004119!4.19e-08!130;UBERON:0000925!4.19e-08!130;UBERON:0006595!4.19e-08!130;UBERON:0002390!7.58e-08!45;UBERON:0003061!7.58e-08!45;UBERON:0004921!6.04e-07!126;UBERON:0004185!6.04e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.84e-11,23;UBERON:0000974,9.84e-11,23;UBERON:0004807,9.84e-11,23;UBERON:0005058,9.84e-11,23;UBERON:0003351,9.84e-11,23;UBERON:0009113,9.84e-11,23;UBERON:0003295,9.84e-11,23;UBERON:0009722,9.84e-11,23;UBERON:0005562,9.84e-11,23;UBERON:0007690,9.84e-11,23;UBERON:0006562,2.62e-10,24;UBERON:0003408,2.62e-10,24;UBERON:0001557,2.62e-10,24;UBERON:0001042,2.62e-10,24;UBERON:0008814,2.62e-10,24;UBERON:0009145,2.62e-10,24;UBERON:0000072,3.20e-09,27;UBERON:0004177,1.28e-08,29;UBERON:0005057,1.28e-08,29;UBERON:0000077,3.18e-07,35;UBERON:0007811,4.91e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.171200729931206,0.786783621770977,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0.523523743973798,1.76469446409304,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0,0.537080087002444,0.79472541912506,0.360586348559907,0.590758108698309,0.605798699688886,0.609654453239999,1.71404514732629,0.974578807397524,1.82802499116626,1.98690733708667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:36896690..36896700,- | |||
}} |
Revision as of 07:35, 14 September 2013
Short description: | p@chr5:36896690..36896700, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:36896690..36896700, - |
Coexpression cluster: | MCL_coexpression_mm9:945 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.86e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 9.84e-11 | 23 |
neck | 9.84e-11 | 23 |
respiratory system epithelium | 9.84e-11 | 23 |
hemolymphoid system gland | 9.84e-11 | 23 |
pharyngeal epithelium | 9.84e-11 | 23 |
thymic region | 9.84e-11 | 23 |
pharyngeal gland | 9.84e-11 | 23 |
entire pharyngeal arch endoderm | 9.84e-11 | 23 |
thymus primordium | 9.84e-11 | 23 |
early pharyngeal endoderm | 9.84e-11 | 23 |
pharynx | 2.62e-10 | 24 |
gland of gut | 2.62e-10 | 24 |
upper respiratory tract | 2.62e-10 | 24 |
chordate pharynx | 2.62e-10 | 24 |
pharyngeal arch system | 2.62e-10 | 24 |
pharyngeal region of foregut | 2.62e-10 | 24 |
segment of respiratory tract | 3.20e-09 | 27 |
hemopoietic organ | 1.28e-08 | 29 |
immune organ | 1.28e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.18e-07 | 35 |
craniocervical region | 4.91e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.