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FFCP PHASE1:Mm9::chr6:108778627..108778715,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=192193|HGNC=|MCL_coexpression_id=700|UniProt=Q925U4,Q6ZQG3|association_with_transcript=0bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end|description=CAGE_peak_1_at_Edem1_5end|id=chr6:108778627..108778715,+|ontology_enrichment_celltype=CL:0000063!2.42e-08!66|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.24e-24!130;UBERON:0000925!1.24e-24!130;UBERON:0006595!1.24e-24!130;UBERON:0001007!1.30e-23!128;UBERON:0001555!1.30e-23!128;UBERON:0007026!1.30e-23!128;UBERON:0004921!1.51e-22!126;UBERON:0004185!1.51e-22!126;UBERON:0000077!7.16e-15!97;UBERON:0001041!1.49e-13!92;UBERON:0003104!2.35e-13!131;UBERON:0009142!2.35e-13!131;UBERON:0000160!5.48e-13!43;UBERON:0005409!9.41e-13!59;UBERON:0002405!1.06e-11!70;UBERON:0000490!3.36e-11!66;UBERON:0003929!1.57e-10!55;UBERON:0005911!3.55e-10!69;UBERON:0002108!2.20e-09!16;UBERON:0000926!3.10e-09!193;UBERON:0004120!3.10e-09!193;UBERON:0006603!3.10e-09!193;UBERON:0001045!1.13e-07!13;UBERON:0001264!1.19e-07!12;UBERON:0003922!1.19e-07!12;UBERON:0002114!1.19e-07!12;UBERON:0003923!1.19e-07!12;UBERON:0003924!1.19e-07!12;UBERON:0003921!1.19e-07!12;UBERON:0000949!1.50e-07!72;UBERON:0002193!1.79e-07!48;UBERON:0005057!3.25e-07!51;UBERON:0000344!5.71e-07!15;UBERON:0004923!6.25e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.31e-18,118;UBERON:0000925,9.31e-18,118;UBERON:0006595,9.31e-18,118;UBERON:0001007,7.00e-17,116;UBERON:0001555,7.00e-17,116;UBERON:0007026,7.00e-17,116;UBERON:0004921,5.68e-16,114;UBERON:0000490,3.31e-11,66;UBERON:0003929,1.54e-10,55;UBERON:0005911,3.50e-10,69;UBERON:0002100,5.81e-09,90;UBERON:0001041,2.37e-08,80;UBERON:0001264,1.19e-07,12;UBERON:0000949,1.48e-07,72;UBERON:0002193,1.76e-07,48;UBERON:0002405,1.76e-07,48;UBERON:0005409,2.73e-07,47;UBERON:0000160,3.88e-07,31;UBERON:0005177,4.85e-07,79;UBERON:0000344,5.71e-07,15;UBERON:0004923,6.25e-07,24|phase1_expression=6.08565618998217,74.6807372348233,88.7248516809595,84.3875149546056,68.1218192727032,41.4661801622368,26.1646157466989,25.4372947179905,34.4932369271583,25.2789688427753,7.53359060192222,5.18519033469687,23.9681021903688,23.2538270434533,11.3257319017325,14.5782192520675,6.99561878128147,25.236973228659,28.5198021899937,27.1609377150739,14.2872727453797,9.92909512008853,12.5375898786689,37.4382269336572,42.8995355595608,62.0170521244222,53.4144875237253,56.8844054290747,57.1970492563685,62.5034721804628,45.6764851949928,5.71527606113668,7.38077745101484,0,13.5760261283099,12.1351291111699,12.2501613757421,63.61680787201,66.413504284523,64.3934205087772,88.8229546926832,80.5993672250966,80.1092082501403,7.30201544258348,7.19776211658553,6.79122982998222,6.25913075478431,5.01457859675027,9.88587822305123,7.58276606389705,9.09911740564856,4.31257693094915,23.1539996359676,29.7398478224651,26.5514101322547,28.0412785279182,28.6533439938757,25.2679325215947,1.41621522601718,4.23192783417626,3.1691570175309,14.2314703469035,21.3430751066673,32.3963898221304,36.5880554149781,32.6820852875206,28.7616106097669,11.5265491596466,3.7328260431052,3.51015439662396,4.41682418837902,5.42736870367227,3.53389665522582,1.83736198822431,2.49198224647415,5.51531271966013,1.10115880999389,3.70293280447044,5.9906547969935,1.71452174049252,2.19570344645783,2.6045668527838,5.30447698102624,2.8138130501584,3.97275444219706,3.53554302568401,2.27794689278565,1.86399445825301,10.2230360999798,17.5326019447742,5.79728977403356,34.4169550792555,40.798280022465,83.6539947038617,64.3278653273192,40.7704467258575,24.1564402626613,16.1908806449155,14.0284442485549,17.666978725517,6.76048414928066,5.13305909657271,0,0,13.4224445426953,18.2419103142071,11.62706223534,34.7118994345942,24.3401610628341,14.2504453502232,9.54169297213747,7.00270600117925,11.3001593655469,7.08396410597326,6.34979018532806,12.6923257242972,17.3036477414062,14.4599356919912,24.7690954545965,12.6178142958979,12.1462835153216,8.24287930329878,18.6391761218122,0.292780797011547,2.30391377494801,37.5521871156629,41.9352935770721,31.1949420116572,43.203877204842,2.54644086988199,2.74500361691176,2.76439574648302,3.47648640384553,4.60287823194595,1.24672826735736,1.46017136760982,7.84163101647435,16.9193480029727,14.4051972307195,5.6819301089348,4.81445638962004,3.67843367093557,3.96136685571768,3.76762044589288,4.96666443804693,2.94661556655154,5.528401749024,4.65666067330228,6.25147179505242,4.34943984385984,5.27853372491847,3.5071317188412,3.89266148915837,8.358051996532,9.26019613835746,4.37875387000685,19.6619692447706,27.5362260612745,51.4335933906023,6.62802472113606,4.22146907965973,6.12211008967451,4.26140524053378,4.52557733019029,4.47374627373397,3.95307706075693,7.77992864058896,4.55384835231961,5.59503489705834,5.58169377868924,7.70153690685629,6.43279944671462,8.34290438105992,6.84452735677896,3.15434922846191,3.39585220851639,43.2848605708775,27.7673094996721,5.11891801284562,5.80591679651096,10.5671318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|EntrezGene=192193
|HGNC=
|MCL_coexpression_id=700
|UniProt=Q925U4,Q6ZQG3
|association_with_transcript=0bp_to_ENSMUST00000089162,ENSMUST00000169217,NM_138677,uc009ddq.1,uc009ddr.1_5end
|description=CAGE_peak_1_at_Edem1_5end
|id=chr6:108778627..108778715,+
|ontology_enrichment_celltype=CL:0000063!2.42e-08!66
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.24e-24!130;UBERON:0000925!1.24e-24!130;UBERON:0006595!1.24e-24!130;UBERON:0001007!1.30e-23!128;UBERON:0001555!1.30e-23!128;UBERON:0007026!1.30e-23!128;UBERON:0004921!1.51e-22!126;UBERON:0004185!1.51e-22!126;UBERON:0000077!7.16e-15!97;UBERON:0001041!1.49e-13!92;UBERON:0003104!2.35e-13!131;UBERON:0009142!2.35e-13!131;UBERON:0000160!5.48e-13!43;UBERON:0005409!9.41e-13!59;UBERON:0002405!1.06e-11!70;UBERON:0000490!3.36e-11!66;UBERON:0003929!1.57e-10!55;UBERON:0005911!3.55e-10!69;UBERON:0002108!2.20e-09!16;UBERON:0000926!3.10e-09!193;UBERON:0004120!3.10e-09!193;UBERON:0006603!3.10e-09!193;UBERON:0001045!1.13e-07!13;UBERON:0001264!1.19e-07!12;UBERON:0003922!1.19e-07!12;UBERON:0002114!1.19e-07!12;UBERON:0003923!1.19e-07!12;UBERON:0003924!1.19e-07!12;UBERON:0003921!1.19e-07!12;UBERON:0000949!1.50e-07!72;UBERON:0002193!1.79e-07!48;UBERON:0005057!3.25e-07!51;UBERON:0000344!5.71e-07!15;UBERON:0004923!6.25e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.31e-18,118;UBERON:0000925,9.31e-18,118;UBERON:0006595,9.31e-18,118;UBERON:0001007,7.00e-17,116;UBERON:0001555,7.00e-17,116;UBERON:0007026,7.00e-17,116;UBERON:0004921,5.68e-16,114;UBERON:0000490,3.31e-11,66;UBERON:0003929,1.54e-10,55;UBERON:0005911,3.50e-10,69;UBERON:0002100,5.81e-09,90;UBERON:0001041,2.37e-08,80;UBERON:0001264,1.19e-07,12;UBERON:0000949,1.48e-07,72;UBERON:0002193,1.76e-07,48;UBERON:0002405,1.76e-07,48;UBERON:0005409,2.73e-07,47;UBERON:0000160,3.88e-07,31;UBERON:0005177,4.85e-07,79;UBERON:0000344,5.71e-07,15;UBERON:0004923,6.25e-07,24
|phase1_expression=6.08565618998217,74.6807372348233,88.7248516809595,84.3875149546056,68.1218192727032,41.4661801622368,26.1646157466989,25.4372947179905,34.4932369271583,25.2789688427753,7.53359060192222,5.18519033469687,23.9681021903688,23.2538270434533,11.3257319017325,14.5782192520675,6.99561878128147,25.236973228659,28.5198021899937,27.1609377150739,14.2872727453797,9.92909512008853,12.5375898786689,37.4382269336572,42.8995355595608,62.0170521244222,53.4144875237253,56.8844054290747,57.1970492563685,62.5034721804628,45.6764851949928,5.71527606113668,7.38077745101484,0,13.5760261283099,12.1351291111699,12.2501613757421,63.61680787201,66.413504284523,64.3934205087772,88.8229546926832,80.5993672250966,80.1092082501403,7.30201544258348,7.19776211658553,6.79122982998222,6.25913075478431,5.01457859675027,9.88587822305123,7.58276606389705,9.09911740564856,4.31257693094915,23.1539996359676,29.7398478224651,26.5514101322547,28.0412785279182,28.6533439938757,25.2679325215947,1.41621522601718,4.23192783417626,3.1691570175309,14.2314703469035,21.3430751066673,32.3963898221304,36.5880554149781,32.6820852875206,28.7616106097669,11.5265491596466,3.7328260431052,3.51015439662396,4.41682418837902,5.42736870367227,3.53389665522582,1.83736198822431,2.49198224647415,5.51531271966013,1.10115880999389,3.70293280447044,5.9906547969935,1.71452174049252,2.19570344645783,2.6045668527838,5.30447698102624,2.8138130501584,3.97275444219706,3.53554302568401,2.27794689278565,1.86399445825301,10.2230360999798,17.5326019447742,5.79728977403356,34.4169550792555,40.798280022465,83.6539947038617,64.3278653273192,40.7704467258575,24.1564402626613,16.1908806449155,14.0284442485549,17.666978725517,6.76048414928066,5.13305909657271,0,0,13.4224445426953,18.2419103142071,11.62706223534,34.7118994345942,24.3401610628341,14.2504453502232,9.54169297213747,7.00270600117925,11.3001593655469,7.08396410597326,6.34979018532806,12.6923257242972,17.3036477414062,14.4599356919912,24.7690954545965,12.6178142958979,12.1462835153216,8.24287930329878,18.6391761218122,0.292780797011547,2.30391377494801,37.5521871156629,41.9352935770721,31.1949420116572,43.203877204842,2.54644086988199,2.74500361691176,2.76439574648302,3.47648640384553,4.60287823194595,1.24672826735736,1.46017136760982,7.84163101647435,16.9193480029727,14.4051972307195,5.6819301089348,4.81445638962004,3.67843367093557,3.96136685571768,3.76762044589288,4.96666443804693,2.94661556655154,5.528401749024,4.65666067330228,6.25147179505242,4.34943984385984,5.27853372491847,3.5071317188412,3.89266148915837,8.358051996532,9.26019613835746,4.37875387000685,19.6619692447706,27.5362260612745,51.4335933906023,6.62802472113606,4.22146907965973,6.12211008967451,4.26140524053378,4.52557733019029,4.47374627373397,3.95307706075693,7.77992864058896,4.55384835231961,5.59503489705834,5.58169377868924,7.70153690685629,6.43279944671462,8.34290438105992,6.84452735677896,3.15434922846191,3.39585220851639,43.2848605708775,27.7673094996721,5.11891801284562,5.80591679651096,10.5671318284117,12.5043785266472,14.4545728499166,19.2127882373685,33.2170343081158,20.7520682952254,15.0801125280162,16.9113001234978,17.3518037536017,22.4704852163555,22.9106332867176,31.46432117419,4.74169752382704,7.31190480702264,7.88954149711563,4.68398054044223,7.37019451236978,7.29412526859313,7.14572869504107,8.26616828685772,8.63493003127561,11.2291419168838,45.3572519443338,7.84171996865642,8.64859578498093,8.31989815823959,12.7801876474757,12.5412123071257,14.2590476997595,19.8510334841059,14.4300351829781,22.2394744682346,30.1913233707445,19.3513292787622,31.8278426576852,43.1909881289561,42.6965844182151,51.1390132645169,14.2259956428286,7.01118223550794,6.51859905768104,7.63852885988347,8.68353918667458,10.7204004762762,12.6163129669587,20.0987657293533,12.4531763843891,11.2946991720875,16.1049316344062,13.764518436122,17.0958132047237,16.2006945611293,54.284862218138,34.8099637643974,27.047035016047,15.7283945393698,3.37156238974363,3.5163505977661,7.37707254195039,6.05930225290495,5.99465616890888,6.24701990874622,5.38558494331997,7.88597033243422,6.23836287430704,4.52922449262132,8.09621403349789,5.84511715822624,3.95287777946523,0.963963949265421,8.80028528291265,5.87616492101942,6.18970445543589,9.89820737835213,131.417686956563,10.9251286269742,42.3252979750651,84.8722858901541,80.9127186493317,81.7777493530847,33.5956781118688,65.436071305951,62.743538595711,94.1789538648732,150.748610262248,137.170272520089,6.12791290356818,4.50152735078276,3.75140182969988,3.85806663056866,3.01478397191865,4.63758925765383,3.62007845324666,2.43571959291679,36.3741147498751,37.70610861376,59.5426674748397,9.23363016472288,9.68786560175433,12.3038366853438,11.6984897123074,11.8181447816444,24.1929094402776,5.56275906031529,19.3084095301574,14.4470807574256,9.4449208958553,8.4765805652111,8.20165366326151,13.2691340459783,19.8874763092811,18.0537373497519,25.0141952586007,10.5013767981662,6.16855187483214,14.4356821660063,11.9885928312199,12.1271211688392,16.8139174084557,18.071822415566,19.0102948168273,29.0549095602273,20.4791657801033,33.552322906694,3.38215763210514,5.83114529571517,6.6183396182839,6.22243802700952,5.42471258606471,4.22390313726945,6.21993364822496,6.51021924219751,6.18670132111694,3.14059357073808,7.4887801627045,32.2331343040742,11.5553372715394,10.9900724166365,25.8542437725812,35.0892323508264,37.9481387632216,39.9048892406297,36.1839341577714,39.9827141794665,37.1889216476399,41.5403882763783,41.6145150758743,63.3073917993368,55.5165285362452,10.8830584135301,10.8773117153292,10.0479519402613,10.5767308309369,7.92077335531981,28.1523713176773,10.0733393346996,18.2213122217206,48.6524940914302,2.82375921308533,2.30162618253588,2.29158205375759,5.15559547031063,2.05524755931193,3.0215755895588,1.35004500046361,4.05289082901798,3.17199686288943,2.5888015587591,1.3492355185943,5.58634822761443,3.92687293234509,4.86213434136588,2.72497111416377,2.38996560985018,6.66740183404846,6.18105171716683,7.38114182061175,7.83361356467772,4.81610669791456,6.22466926574051,7.11675456771106,9.09157164149144,9.9363361293211,6.66811167796303,9.38663040153329,11.1887347868949,11.1263193216893,8.68473628792944,6.17164654293748,6.38912902173615,6.91464950847231,8.1393993314104,9.50504742194839,8.630690004951,7.50004688778368,6.31367307450823,7.60503037536826,7.2948495315506,7.3553711236988,8.86540341380071,9.41231399290286,9.76102099471586,7.33045121728337,9.49280196164194,10.0590591631526,11.1732948105115,8.99055160723564,11.6913452133343,12.2889952878823
|short_description=p1@Edem1
}}

Revision as of 08:28, 14 September 2013

Short description:p1@Edem1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Edem1_5end
Coexpression cluster:MCL_coexpression_mm9:700
Association with transcript: 0bp_to_ENSMUST00000089162, ENSMUST00000169217, NM_138677, uc009ddq.1, uc009ddr.1_5end
EntrezGene:Edem1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Edem1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I574.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I688.72
CD326+ enterocyte, pool1.CNhs13542.11848-124I384.39
CD326+ enterocyte, pool2.CNhs13197.11849-124I468.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I741.47
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E734.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.97
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E823.25
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.24
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.54
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D137.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D242.90
GP2+ M cell, pool1.CNhs13228.11845-124H962.02
GP2+ M cell, pool2.CNhs13231.11846-124I153.41
GP2+ M cell, pool3.CNhs13240.11847-124I256.88
Ileum epithelium, pool1.CNhs13199.10252-104B957.20
Ileum epithelium, pool2.CNhs13232.10253-104C162.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C845.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G863.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H166.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H364.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G988.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H280.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H480.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.89
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.15
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A126.55
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C128.04
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.65
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D121.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C732.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E736.59
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D232.68
Mouse Microglia, donor1.CNhs12629.11718-123C828.76
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D910.22
Mouse Schwann, donor2.CNhs12573.11746-123F917.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F734.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C440.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C883.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F464.33
Mouse hepatocyte, donor8.CNhs13091.11824-124F640.77
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.71
accessory axillary lymph node, adult.CNhs10475.1063-29H924.34
adrenal gland, adult.CNhs10508.49-24D714.25
adrenal gland, embryo E14.CNhs11038.406-44C59.54
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I111.30
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C16.35
adrenal gland, neonate N25.CNhs11223.1377-27I312.69
amnion, adult pregnant day17.5.CNhs10488.583-22A817.30
aorta, adult.CNhs10498.46-23H114.46
bone (os femoris), adult.CNhs10483.56-12G224.77
bone (os femoris), neonate N02.CNhs11227.1985-43F512.62
bone (os femoris), neonate N16.CNhs11225.1525-43A612.15
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H737.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C741.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D131.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D443.20
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.92
epididymis, adult.CNhs10490.58-23B214.41
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G85.53
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B59.26
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D551.43
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I96.12
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G17.70
heart, neonate N20.CNhs11127.821-26I66.43
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I343.28
intestine, adult.CNhs10496.178-9A327.77
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D810.57
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D314.45
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D133.22
intestine, neonate N01.CNhs11192.1322-23E920.75
intestine, neonate N06.CNhs11102.688-20B815.08
intestine, neonate N07.CNhs11095.720-20F216.91
intestine, neonate N10.CNhs11098.755-23A517.35
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E322.91
intestine, neonate N30.CNhs11131.1384-42G131.46
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F87.31
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C77.37
kidney, neonate N00.CNhs11214.646-21G77.29
kidney, neonate N10.CNhs11206.758-6D57.15
kidney, neonate N20.CNhs11113.832-19I18.27
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H111.23
liver, adult pregnant day01.CNhs10466.508-5B245.36
liver, embryo E12.CNhs10601.355-15F87.84
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D712.78
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A314.26
liver, embryo E18.CNhs10579.499-43G419.85
liver, neonate N00.CNhs11117.641-24F414.43
liver, neonate N03.CNhs11123.1345-25G222.24
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B931.83
liver, neonate N20.CNhs11220.823-25A343.19
liver, neonate N25.CNhs11198.1368-26H142.70
liver, neonate N30.CNhs11106.1382-42D151.14
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G27.01
lung, embryo E14.CNhs10604.404-26F86.52
lung, embryo E15.CNhs11020.432-17C57.64
lung, embryo E16.CNhs10998.458-17B68.68
lung, embryo E17.CNhs10605.480-44A610.72
lung, embryo E18.CNhs10583.1287-20I612.62
lung, neonate N00.CNhs11224.640-42C620.10
lung, neonate N06.CNhs11212.683-20E512.45
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E616.10
lung, neonate N20.CNhs11109.822-18A413.76
lung, neonate N25.CNhs11119.1359-25C717.10
lung, neonate N30.CNhs11133.1394-42H216.20
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A154.28
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A134.81
mammary gland, adult lactating day02.CNhs10480.595-22B627.05
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I78.80
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E4131.42
pancreas, embryo E14.CNhs11012.405-44F410.93
pancreas, embryo E15.CNhs11042.1556-45F242.33
pancreas, embryo E16.CNhs11003.460-26E584.87
pancreas, embryo E17.CNhs10599.1558-45G380.91
pancreas, embryo E18.CNhs10580.1535-43I781.78
pancreas, neonate N00.CNhs11105.645-26G933.60
pancreas, neonate N01.CNhs11138.1531-43D765.44
pancreas, neonate N02.CNhs11139.1539-43D862.74
pancreas, neonate N16.CNhs11136.787-43B694.18
pancreas, neonate N25.CNhs11094.1555-45E2150.75
pancreas, neonate N30.CNhs11182.1548-44H5137.17
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I736.37
placenta, adult pregnant day17.CNhs10464.577-18G337.71
prostate, adult.CNhs10470.859-1F859.54
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G49.69
skin, neonate N03.CNhs11215.662-22H312.30
skin, neonate N06.CNhs11097.693-20I511.70
skin, neonate N10.CNhs11108.762-6C411.82
small intestine, neonate N16.CNhs11114.790-21I124.19
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G219.31
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D18.48
spleen, neonate N20.CNhs11112.824-19H18.20
spleen, neonate N25.CNhs11099.1354-25G313.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.01
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E36.17
stomach, embryo E15.CNhs10603.1252-16G814.44
stomach, embryo E16.CNhs11022.459-17D411.99
stomach, embryo E17.CNhs11006.1035-18D512.13
stomach, embryo E18.CNhs10999.1286-20C616.81
stomach, neonate N03.CNhs11193.1340-24B818.07
stomach, neonate N07.CNhs11210.718-18A919.01
stomach, neonate N25.CNhs11104.1355-25E429.05
stomach, neonate N30.CNhs11134.1386-42I120.48
submandibular gland, adult.CNhs10469.59-29C133.55
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C56.62
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B76.22
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D96.19
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B532.23
thymus, embryo E14.CNhs11041.402-44I411.56
thymus, embryo E15.CNhs11005.430-45I210.99
thymus, embryo E16.CNhs11002.456-26C525.85
thymus, embryo E17.CNhs10581.478-18C135.09
thymus, embryo E18.CNhs10595.1273-19G437.95
thymus, neonate N02.CNhs11181.1541-43F839.90
thymus, neonate N03.CNhs11137.2104-43C736.18
thymus, neonate N06.CNhs11197.681-26C439.98
thymus, neonate N07.CNhs11211.713-19D337.19
thymus, neonate N10.CNhs11194.748-24E441.54
thymus, neonate N20.CNhs11186.820-7A241.61
thymus, neonate N25.CNhs11125.1362-25G763.31
thymus, neonate N30.CNhs11132.1393-42G255.52
tongue, adult.CNhs10499.32-1B410.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.58
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F528.15
uterus, adult.CNhs10509.92-27E510.07
vagina, adult.CNhs10502.89-27D518.22
vesicular gland, adult.CNhs10491.51-27F848.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.63
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B310.06
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D111.69
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.31e-18118
endoderm9.31e-18118
presumptive endoderm9.31e-18118
digestive system7.00e-17116
digestive tract7.00e-17116
primitive gut7.00e-17116
subdivision of digestive tract5.68e-16114
unilaminar epithelium3.31e-1166
gut epithelium1.54e-1055
endo-epithelium3.50e-1069
trunk5.81e-0990
foregut2.37e-0880
pancreas1.19e-0712
endocrine system1.48e-0772
hemolymphoid system1.76e-0748
immune system1.76e-0748
gastrointestinal system2.73e-0747
intestine3.88e-0731
trunk region element4.85e-0779
mucosa5.71e-0715
organ component layer6.25e-0724







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