FFCP PHASE1:Mm9::chr6:13019758..13019866,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71900|HGNC=|UniProt=Q80X71,D3Z0M2,D3Z6E0|association_with_transcript=0bp_to_ENSMUST00000031556,ENSMUST00000124234,ENSMUST00000136742,ENSMUST00000142211,ENSMUST00000142798,NM_027992,uc009ayk.2_5end|description=CAGE_peak_1_at_Tmem106b_5end|id=chr6:13019758..13019866,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!6.36e-13!122;UBERON:0000025!3.75e-11!114;UBERON:0000475!1.25e-07!200;UBERON:0007023!2.60e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.36e-13,122;UBERON:0000025,3.75e-11,114;UBERON:0007023,2.60e-07,51;UBERON:0003104,3.74e-07,61;UBERON:0009142,3.74e-07,61|phase1_expression=78.3127862342442,17.4487703819681,18.1999695755814,29.6414927080693,20.5367249278002,22.4958224361932,20.0906870912152,60.8170853409824,6.335492496825,6.08567768437183,10.9579499664323,9.49288692044503,59.064251826266,49.3051069643145,24.650122374359,28.9539632367451,20.9868563438444,64.8274749811178,76.5098539520022,62.3852788143104,63.7824676133023,41.8014904555727,42.5755656296465,31.8384921358879,38.7701685003517,18.3754228516806,21.5380998079537,20.9007095705312,43.705386474966,37.8045194639896,35.4768817048488,10.7955214488137,9.84103660135312,0,11.2652131702997,13.2987716286794,13.6793468695787,65.7094660256945,49.2241267049994,65.4404679967248,84.7053342764661,75.8180488303875,75.73961507286,146.292102487621,131.58725672293,104.80519548432,61.8089162034951,27.6891948603167,33.6119859583742,70.1891935658163,59.6342156124044,23.0004102983955,48.3213905446281,50.7753499407941,49.7418822730847,162.587963574718,231.519019470515,156.248643960065,33.9891654244124,33.3264316941381,31.691570175309,24.3968063089775,36.4610866405567,24.7472422252385,18.7884608887725,25.5772841380596,15.8788058574755,21.9004434033286,32.4548486525535,24.436074838036,26.0802952075714,59.7010557403949,65.3770881216776,31.847607795888,22.2361492762308,33.0918763179608,128.835580769285,131.134896213488,139.0139125969,29.1468695883728,36.412082153759,33.3384557156326,91.8512066714543,114.803572446463,118.877036770358,116.967548433046,100.941521686564,58.3430265433191,72.015609859858,125.146503536837,120.003898322495,135.086548686078,101.315728722455,155.974222383329,274.205648162916,277.328643113251,99.7155382935438,71.9215961279404,62.3486411046885,54.7676340491027,94.5059346701526,85.9787398675929,35.6727335589304,28.4426681261332,71.4420435337007,63.8466860997248,64.7071289618923,143.414952927139,92.4408244620403,98.1202539218492,46.1470969197921,67.2868707069832,57.8844898112707,72.0454221841536,91.8367802729855,107.947601952191,264.49861547578,187.834564638965,46.8843592533433,68.1038438278593,57.8604778366231,62.5489076544437,70.8288692628864,131.751358655196,120.850749831364,48.5368404896324,23.3639492786545,16.7972764678154,24.5245538251015,160.27598416316,169.275223042892,70.3664371832041,144.621834399974,164.936469978063,142.542598567858,173.111427693297,88.9057646413261,82.3574145438816,84.4094013168474,169.826577700384,43.5903483925057,37.933847231523,50.2373342156924,53.5002103316788,73.5474555825854,64.6974287438491,58.0013675024721,143.062964018676,15.5208954911646,37.0647917128926,48.5625102692499,49.5382355286319,63.3947728234363,62.3371378074678,70.3774906515167,46.5740184355274,28.7907406798426,24.1907032687832,17.9023004619223,41.4251545071004,44.5599513964083,43.3949568121046,44.5080102900195,53.3231068035464,54.1477566234698,58.5985540771028,60.0932419135147,88.5081295143145,64.0137816163439,95.0529617017961,130.601852178374,100.731791336054,118.557062257167,161.718734606248,154.352822246069,84.3817821510132,51.2149113624887,35.4363759329149,35.4058495888488,46.4473343720877,40.2066479324931,42.1518566462786,47.3665233389574,66.008292261058,45.0802608467286,71.8087442596687,67.6091711672725,70.2316346305262,81.4949884157922,40.44687338944,46.685818772934,57.1535454240034,21.4324728076982,47.6416297582569,58.6080225500018,55.5968125017708,75.4475175082064,108.009162631091,151.704452561093,230.567051144139,248.057989989372,304.174009067238,253.763448786599,19.520877368783,25.15955137449,22.4862112384854,25.7632354163399,28.2177276910328,33.8652382869288,58.9777081774162,136.51786094458,83.1921081959887,107.826154895516,99.3616330274904,91.7390758956808,170.743321492248,156.255147177586,321.307385228003,99.2124631194667,41.6881105895066,44.163508615789,40.9085656718203,49.7543326371624,62.1448215109136,88.0761471278251,111.616446574661,104.985005974723,86.592693652671,93.9188587392599,110.116147488976,97.567014754231,124.108892262937,67.8560777726725,55.4783797495084,64.4211197654937,64.0173251426979,144.013879219049,155.657119794446,168.525123847222,98.2111906825011,66.2567260774139,69.107657740505,62.6882087402445,73.602389769386,75.0831531657668,62.559913304332,71.6514941964563,65.4653121721339,73.9188144759999,135.597595530003,89.5641937664175,37.0376455627891,91.8682450754169,119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| ||
|EntrezGene=71900 | |||
|HGNC= | |||
|UniProt=Q80X71,D3Z0M2,D3Z6E0 | |||
|association_with_transcript=0bp_to_ENSMUST00000031556,ENSMUST00000124234,ENSMUST00000136742,ENSMUST00000142211,ENSMUST00000142798,NM_027992,uc009ayk.2_5end | |||
|description=CAGE_peak_1_at_Tmem106b_5end | |||
|id=chr6:13019758..13019866,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!6.36e-13!122;UBERON:0000025!3.75e-11!114;UBERON:0000475!1.25e-07!200;UBERON:0007023!2.60e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.36e-13,122;UBERON:0000025,3.75e-11,114;UBERON:0007023,2.60e-07,51;UBERON:0003104,3.74e-07,61;UBERON:0009142,3.74e-07,61 | |||
|phase1_expression=78.3127862342442,17.4487703819681,18.1999695755814,29.6414927080693,20.5367249278002,22.4958224361932,20.0906870912152,60.8170853409824,6.335492496825,6.08567768437183,10.9579499664323,9.49288692044503,59.064251826266,49.3051069643145,24.650122374359,28.9539632367451,20.9868563438444,64.8274749811178,76.5098539520022,62.3852788143104,63.7824676133023,41.8014904555727,42.5755656296465,31.8384921358879,38.7701685003517,18.3754228516806,21.5380998079537,20.9007095705312,43.705386474966,37.8045194639896,35.4768817048488,10.7955214488137,9.84103660135312,0,11.2652131702997,13.2987716286794,13.6793468695787,65.7094660256945,49.2241267049994,65.4404679967248,84.7053342764661,75.8180488303875,75.73961507286,146.292102487621,131.58725672293,104.80519548432,61.8089162034951,27.6891948603167,33.6119859583742,70.1891935658163,59.6342156124044,23.0004102983955,48.3213905446281,50.7753499407941,49.7418822730847,162.587963574718,231.519019470515,156.248643960065,33.9891654244124,33.3264316941381,31.691570175309,24.3968063089775,36.4610866405567,24.7472422252385,18.7884608887725,25.5772841380596,15.8788058574755,21.9004434033286,32.4548486525535,24.436074838036,26.0802952075714,59.7010557403949,65.3770881216776,31.847607795888,22.2361492762308,33.0918763179608,128.835580769285,131.134896213488,139.0139125969,29.1468695883728,36.412082153759,33.3384557156326,91.8512066714543,114.803572446463,118.877036770358,116.967548433046,100.941521686564,58.3430265433191,72.015609859858,125.146503536837,120.003898322495,135.086548686078,101.315728722455,155.974222383329,274.205648162916,277.328643113251,99.7155382935438,71.9215961279404,62.3486411046885,54.7676340491027,94.5059346701526,85.9787398675929,35.6727335589304,28.4426681261332,71.4420435337007,63.8466860997248,64.7071289618923,143.414952927139,92.4408244620403,98.1202539218492,46.1470969197921,67.2868707069832,57.8844898112707,72.0454221841536,91.8367802729855,107.947601952191,264.49861547578,187.834564638965,46.8843592533433,68.1038438278593,57.8604778366231,62.5489076544437,70.8288692628864,131.751358655196,120.850749831364,48.5368404896324,23.3639492786545,16.7972764678154,24.5245538251015,160.27598416316,169.275223042892,70.3664371832041,144.621834399974,164.936469978063,142.542598567858,173.111427693297,88.9057646413261,82.3574145438816,84.4094013168474,169.826577700384,43.5903483925057,37.933847231523,50.2373342156924,53.5002103316788,73.5474555825854,64.6974287438491,58.0013675024721,143.062964018676,15.5208954911646,37.0647917128926,48.5625102692499,49.5382355286319,63.3947728234363,62.3371378074678,70.3774906515167,46.5740184355274,28.7907406798426,24.1907032687832,17.9023004619223,41.4251545071004,44.5599513964083,43.3949568121046,44.5080102900195,53.3231068035464,54.1477566234698,58.5985540771028,60.0932419135147,88.5081295143145,64.0137816163439,95.0529617017961,130.601852178374,100.731791336054,118.557062257167,161.718734606248,154.352822246069,84.3817821510132,51.2149113624887,35.4363759329149,35.4058495888488,46.4473343720877,40.2066479324931,42.1518566462786,47.3665233389574,66.008292261058,45.0802608467286,71.8087442596687,67.6091711672725,70.2316346305262,81.4949884157922,40.44687338944,46.685818772934,57.1535454240034,21.4324728076982,47.6416297582569,58.6080225500018,55.5968125017708,75.4475175082064,108.009162631091,151.704452561093,230.567051144139,248.057989989372,304.174009067238,253.763448786599,19.520877368783,25.15955137449,22.4862112384854,25.7632354163399,28.2177276910328,33.8652382869288,58.9777081774162,136.51786094458,83.1921081959887,107.826154895516,99.3616330274904,91.7390758956808,170.743321492248,156.255147177586,321.307385228003,99.2124631194667,41.6881105895066,44.163508615789,40.9085656718203,49.7543326371624,62.1448215109136,88.0761471278251,111.616446574661,104.985005974723,86.592693652671,93.9188587392599,110.116147488976,97.567014754231,124.108892262937,67.8560777726725,55.4783797495084,64.4211197654937,64.0173251426979,144.013879219049,155.657119794446,168.525123847222,98.2111906825011,66.2567260774139,69.107657740505,62.6882087402445,73.602389769386,75.0831531657668,62.559913304332,71.6514941964563,65.4653121721339,73.9188144759999,135.597595530003,89.5641937664175,37.0376455627891,91.8682450754169,119.108428786171,78.3196316205781,32.5326052447675,38.6974152914881,49.0373207365335,27.4630760379119,71.3249543229912,85.7981933318494,56.7112617984909,60.6045543254026,59.4149104919334,92.7683755459989,80.4457237335857,105.876717389428,55.9990002437375,18.6276504647166,49.2975180572662,84.4139512137222,75.4500098456759,77.0089416417926,51.7590413494819,150.893908284966,112.906493770416,86.888188833655,55.5666672412788,82.3468576149118,62.3635643757132,63.6254593536717,62.0452601036332,47.8028572072955,141.85035603804,38.7876899411126,46.6434321596883,45.0022701508399,29.9505846637459,32.396531969883,30.8850533828806,35.1855350087281,32.8885912960596,32.0623939226263,85.9203556213602,39.2256632040608,48.7966721104437,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| |||
|short_description=p1@Tmem106b | |||
}} | |||
Revision as of 09:07, 14 September 2013
| Short description: | p1@Tmem106b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tmem106b_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000031556, ENSMUST00000124234, ENSMUST00000136742, ENSMUST00000142211, ENSMUST00000142798, NM_027992, uc009ayk.2_5end |
| EntrezGene: | Tmem106b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 6.36e-13 | 122 |
| tube | 3.75e-11 | 114 |
| adult organism | 2.60e-07 | 51 |
| mesenchyme | 3.74e-07 | 61 |
| entire embryonic mesenchyme | 3.74e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
