FFCP PHASE1:Mm9::chr6:134742728..134742748,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70686|HGNC=|UniProt=Q3UMM5,Q6PCP3,Q9AG16|association_with_transcript=-82bp_to_NM_001048054,NM_130447,uc009eko.1,uc009ekp.1,uc009ekq.1,uc009ekr.1_5end|description=CAGE_peak_2_at_Dusp16_5end|id=chr6:134742728..134742748,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.36e-16!128;UBERON:0001555!1.36e-16!128;UBERON:0007026!1.36e-16!128;UBERON:0004119!2.78e-16!130;UBERON:0000925!2.78e-16!130;UBERON:0006595!2.78e-16!130;UBERON:0004921!6.85e-16!126;UBERON:0004185!6.85e-16!126;UBERON:0005409!2.09e-11!59;UBERON:0000160!1.59e-09!43|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.98e-17,116;UBERON:0001555,3.98e-17,116;UBERON:0007026,3.98e-17,116;UBERON:0004119,9.80e-17,118;UBERON:0000925,9.80e-17,118;UBERON:0006595,9.80e-17,118;UBERON:0004921,2.06e-16,114;UBERON:0005409,1.34e-12,47;UBERON:0000160,3.55e-11,31|phase1_expression=2.08193501236232,8.02643437570531,5.0049916332849,7.86406949397758,6.01074875935617,4.8684988854448,2.80335168714631,0.903863264091034,2.25261955442667,3.27690336850791,0.513653904676515,0.8774937489487,1.19840510951844,0.437102012094987,2.6648780945253,3.03712901084739,1.39912375625629,2.05050407482854,2.60517423850904,1.27316895539409,2.38121212422995,0.595745707205312,0.261199789138935,4.7997726838022,3.21172993494038,6.31655160526522,5.59990595006797,4.74036711908956,1.71021077510736,3.2763916868791,2.88249663851896,2.54012269383853,0.61506478758457,0,6.35473563452804,5.65197794218874,3.06254034393554,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,1.1330713617802,1.11514624341466,0.917733760808408,0.782391344348039,0.872100625521786,0.439372365468944,0.972149495371417,0.699932108126813,1.43752564364972,1.67782606057736,0.725362142011344,1.34437519656986,1.02903774414379,0.85960031981627,1.03134418455488,0.809265843438391,0.528990979272033,1.26766280701236,0,0.889294796111139,0,0.988866362566974,0,0.898800331555214,0.768436610643109,1.14058573539325,1.62007125998029,1.05162480675691,1.14260393761521,1.76694832761291,1.71487118900936,1.43768206527355,2.75765635983006,1.10115880999389,0.383062014255563,0.768032666281217,0.791317726381163,0.914876436024097,1.56274011167028,0.558365998002762,0,0.916789486660861,1.76777151284201,1.13897344639282,0.745597783301202,0.757261933331841,0.377857800533928,1.15945795480671,0.860423876981386,0.679971333707751,7.01614149129162,3.89865850468601,3.13618820968135,3.7919993435573,2.38602451609281,0.779358013808606,0,3.09855523508697,0,0,0,1.08245520505607,1.52015919285059,1.51657333504435,3.53970027129086,2.07150306917737,0.890652834388949,0.867426633830679,0.913396434936424,3.68984795609694,2.41156224884196,2.3517741427141,0.879666139307728,1.97755974187499,1.15679485535929,1.76922110389975,1.45590164952668,1.54589062922275,0.969750506270444,18.6391761218122,1.46390398505774,0.83778682725382,7.66371165625774,1.67741174308288,0.599902730993408,0.508280908292259,1.3481157546434,0.915001205637253,0.376963056338593,0.869121600961382,0.511430914660661,1.24672826735736,0.324482526135515,0.611036183101898,1.61729061793121,2.52722758433675,3.99839526184301,3.513251959993,1.83921683546778,6.66229880279792,5.12396380641431,4.28629944653366,5.25266253167884,3.18585863503078,2.32833033665114,1.94011193639558,3.59301552318857,4.75068035242662,3.94552318369635,6.95118123063995,6.61679116392116,4.7329891373827,2.38841120182192,0.702213187313235,0.51469581422943,1.13665399758237,1.03562886267751,0.703578179943289,1.08037236876609,1.18372367792605,0.590292695242212,0.462801338662135,0.232533944750408,0.804820204198858,0.467061369468678,0.329119699826961,0.492502392237286,0.729619285912702,0.438599962275997,0.219550115291051,0.805238512562231,0.630869845692382,0.514523061896422,13.8775888853195,11.1069237998689,1.06644125267617,3.0190767341857,5.92790322081629,5.44545516483025,4.66993892074228,2.28270751335071,8.0669940462567,2.79988223030818,2.5133520880027,1.98956472041151,3.50935356814416,13.4822911298133,7.5648317456143,11.7493351220077,2.27601481143698,2.85621281524322,6.76246414038483,4.2766778847516,2.90928730751439,2.03393877681924,1.70738650235495,2.80459281161244,1.255989822731,0.246794327843601,3.85388415213294,5.83957870006329,2.16214894624523,5.39669069723649,6.08580364165509,3.13530307678142,2.5462585178142,3.45235364940973,1.29708181420028,3.84385978463314,4.31304619582064,1.48856379067401,2.80833905803104,2.77836765741823,4.12614051100398,1.92977408545347,4.43407656399851,1.32643988239339,1.79261474086228,1.35796068620151,1.40814148973101,2.68010011906905,1.90434912708811,3.90267295715598,1.89162172927429,1.99318220683897,2.07291199254733,3.27726629431476,2.76295970985433,3.03763023021174,0,0.54390568381871,1.47529281905711,1.37968373152366,0.80275294993896,0.703270119553219,0.655739781506702,0,3.78609863299508,2.73307121007647,2.80050417052639,1.91175038362042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| ||
|EntrezGene=70686 | |||
|HGNC= | |||
|UniProt=Q3UMM5,Q6PCP3,Q9AG16 | |||
|association_with_transcript=-82bp_to_NM_001048054,NM_130447,uc009eko.1,uc009ekp.1,uc009ekq.1,uc009ekr.1_5end | |||
|description=CAGE_peak_2_at_Dusp16_5end | |||
|id=chr6:134742728..134742748,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.36e-16!128;UBERON:0001555!1.36e-16!128;UBERON:0007026!1.36e-16!128;UBERON:0004119!2.78e-16!130;UBERON:0000925!2.78e-16!130;UBERON:0006595!2.78e-16!130;UBERON:0004921!6.85e-16!126;UBERON:0004185!6.85e-16!126;UBERON:0005409!2.09e-11!59;UBERON:0000160!1.59e-09!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.98e-17,116;UBERON:0001555,3.98e-17,116;UBERON:0007026,3.98e-17,116;UBERON:0004119,9.80e-17,118;UBERON:0000925,9.80e-17,118;UBERON:0006595,9.80e-17,118;UBERON:0004921,2.06e-16,114;UBERON:0005409,1.34e-12,47;UBERON:0000160,3.55e-11,31 | |||
|phase1_expression=2.08193501236232,8.02643437570531,5.0049916332849,7.86406949397758,6.01074875935617,4.8684988854448,2.80335168714631,0.903863264091034,2.25261955442667,3.27690336850791,0.513653904676515,0.8774937489487,1.19840510951844,0.437102012094987,2.6648780945253,3.03712901084739,1.39912375625629,2.05050407482854,2.60517423850904,1.27316895539409,2.38121212422995,0.595745707205312,0.261199789138935,4.7997726838022,3.21172993494038,6.31655160526522,5.59990595006797,4.74036711908956,1.71021077510736,3.2763916868791,2.88249663851896,2.54012269383853,0.61506478758457,0,6.35473563452804,5.65197794218874,3.06254034393554,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,1.1330713617802,1.11514624341466,0.917733760808408,0.782391344348039,0.872100625521786,0.439372365468944,0.972149495371417,0.699932108126813,1.43752564364972,1.67782606057736,0.725362142011344,1.34437519656986,1.02903774414379,0.85960031981627,1.03134418455488,0.809265843438391,0.528990979272033,1.26766280701236,0,0.889294796111139,0,0.988866362566974,0,0.898800331555214,0.768436610643109,1.14058573539325,1.62007125998029,1.05162480675691,1.14260393761521,1.76694832761291,1.71487118900936,1.43768206527355,2.75765635983006,1.10115880999389,0.383062014255563,0.768032666281217,0.791317726381163,0.914876436024097,1.56274011167028,0.558365998002762,0,0.916789486660861,1.76777151284201,1.13897344639282,0.745597783301202,0.757261933331841,0.377857800533928,1.15945795480671,0.860423876981386,0.679971333707751,7.01614149129162,3.89865850468601,3.13618820968135,3.7919993435573,2.38602451609281,0.779358013808606,0,3.09855523508697,0,0,0,1.08245520505607,1.52015919285059,1.51657333504435,3.53970027129086,2.07150306917737,0.890652834388949,0.867426633830679,0.913396434936424,3.68984795609694,2.41156224884196,2.3517741427141,0.879666139307728,1.97755974187499,1.15679485535929,1.76922110389975,1.45590164952668,1.54589062922275,0.969750506270444,18.6391761218122,1.46390398505774,0.83778682725382,7.66371165625774,1.67741174308288,0.599902730993408,0.508280908292259,1.3481157546434,0.915001205637253,0.376963056338593,0.869121600961382,0.511430914660661,1.24672826735736,0.324482526135515,0.611036183101898,1.61729061793121,2.52722758433675,3.99839526184301,3.513251959993,1.83921683546778,6.66229880279792,5.12396380641431,4.28629944653366,5.25266253167884,3.18585863503078,2.32833033665114,1.94011193639558,3.59301552318857,4.75068035242662,3.94552318369635,6.95118123063995,6.61679116392116,4.7329891373827,2.38841120182192,0.702213187313235,0.51469581422943,1.13665399758237,1.03562886267751,0.703578179943289,1.08037236876609,1.18372367792605,0.590292695242212,0.462801338662135,0.232533944750408,0.804820204198858,0.467061369468678,0.329119699826961,0.492502392237286,0.729619285912702,0.438599962275997,0.219550115291051,0.805238512562231,0.630869845692382,0.514523061896422,13.8775888853195,11.1069237998689,1.06644125267617,3.0190767341857,5.92790322081629,5.44545516483025,4.66993892074228,2.28270751335071,8.0669940462567,2.79988223030818,2.5133520880027,1.98956472041151,3.50935356814416,13.4822911298133,7.5648317456143,11.7493351220077,2.27601481143698,2.85621281524322,6.76246414038483,4.2766778847516,2.90928730751439,2.03393877681924,1.70738650235495,2.80459281161244,1.255989822731,0.246794327843601,3.85388415213294,5.83957870006329,2.16214894624523,5.39669069723649,6.08580364165509,3.13530307678142,2.5462585178142,3.45235364940973,1.29708181420028,3.84385978463314,4.31304619582064,1.48856379067401,2.80833905803104,2.77836765741823,4.12614051100398,1.92977408545347,4.43407656399851,1.32643988239339,1.79261474086228,1.35796068620151,1.40814148973101,2.68010011906905,1.90434912708811,3.90267295715598,1.89162172927429,1.99318220683897,2.07291199254733,3.27726629431476,2.76295970985433,3.03763023021174,0,0.54390568381871,1.47529281905711,1.37968373152366,0.80275294993896,0.703270119553219,0.655739781506702,0,3.78609863299508,2.73307121007647,2.80050417052639,1.91175038362042,2.22798674082394,1.69845918473299,3.23848561339915,3.21481443702443,3.55759000151871,0.642642632843614,1.98716119291576,1.78065603667255,2.76907830901079,4.78413356620353,3.98235415019888,1.94224508923985,3.62788268357701,3.58349651536206,2.36241514304618,5.53383266299069,1.80899805217755,1.09060118843252,1.42598951353889,1.8962205476149,2.10837217149998,0,5.10659408630682,2.70091641046965,1.94038025674132,2.57204442037911,5.67488747655275,4.10248280484762,1.97458824722545,2.43571959291679,0.704015124191131,2.96564899209348,3.08739757276947,5.44124634706884,5.00539722757307,4.94565984410878,4.65552141612232,3.93938159388147,6.99554007911642,1.11255181206306,3.07567585436135,1.44470807574256,2.40752885580625,2.0720530270516,3.41735569302563,1.37266903923914,1.69978429993855,1.11961161858926,1.52019971184866,2.86401185404534,1.42351197111511,4.06638934253697,3.78018692876304,4.59994251231831,4.58561383866973,3.37160865962052,2.97552440611209,2.8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| |||
|short_description=p2@Dusp16 | |||
}} |
Revision as of 09:09, 14 September 2013
Short description: | p2@Dusp16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dusp16_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_NM_001048054, NM_130447, uc009eko.1, uc009ekp.1, uc009ekq.1, uc009ekr.1_5end |
EntrezGene: | Dusp16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 3.98e-17 | 116 |
digestive tract | 3.98e-17 | 116 |
primitive gut | 3.98e-17 | 116 |
endoderm-derived structure | 9.80e-17 | 118 |
endoderm | 9.80e-17 | 118 |
presumptive endoderm | 9.80e-17 | 118 |
subdivision of digestive tract | 2.06e-16 | 114 |
gastrointestinal system | 1.34e-12 | 47 |
intestine | 3.55e-11 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.