Personal tools

FFCP PHASE1:Mm9::chr6:145695359..145695389,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=71323|HGNC=|MCL_coexpression_id=3552|UniProt=Q8CJ96|association_with_transcript=91bp_to_ENSMUST00000111704_5end|description=CAGE_peak_3_at_Rassf8_5end|id=chr6:145695359..145695389,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!3.52e-11!47;UBERON:0005177!5.33e-11!85;UBERON:0002100!7.30e-11!98;UBERON:0009569!2.98e-10!66;UBERON:0000466!4.34e-08!79;UBERON:0005256!2.84e-07!47;UBERON:0004111!2.99e-07!122;UBERON:0005172!3.97e-07!49;UBERON:0005173!3.97e-07!49;UBERON:0002417!3.97e-07!49;UBERON:0000916!3.97e-07!49;UBERON:0000926!5.80e-07!193;UBERON:0004120!5.80e-07!193;UBERON:0006603!5.80e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.80e-12,47;UBERON:0005177,6.14e-12,79;UBERON:0002100,6.36e-12,90;UBERON:0009569,2.24e-10,66;UBERON:0003104,1.30e-08,61;UBERON:0009142,1.30e-08,61;UBERON:0005256,4.74e-08,45;UBERON:0005172,1.12e-07,49;UBERON:0005173,1.12e-07,49;UBERON:0002417,1.12e-07,49;UBERON:0000916,1.12e-07,49;UBERON:0004111,2.06e-07,122;UBERON:0004535,2.46e-07,23;UBERON:0001009,2.46e-07,23;UBERON:0004872,5.03e-07,33|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,3.04130793658544,3.12029478674859,0,0.218025156380447,1.09843091367236,0.58328969722285,1.39986421625363,0,0,0,0,0,0.85960031981627,1.54701627683233,0,0,0,1.35537812827653,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,1.71390590642282,0,0,0,0,2.20231761998777,0.893811366596314,0.46081959976873,0,0,0.52091337055676,1.3959149950069,0,0.916789486660861,0,0.569486723196412,1.1183966749518,0.757261933331841,1.5870027622425,1.73918693221007,2.58127163094416,7.47968467078526,1.07940638327563,5.19821133958135,3.13618820968135,1.40444420131752,0.511290967734173,2.07828803682295,1.06001872353102,1.26759077799012,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,2.51204535381932,0.258937883647172,2.67195850316685,1.04091196059682,1.52232739156071,2.30615497256059,1.65794904607885,4.46837087115678,4.77533047052767,3.21353458054686,1.73519228303894,0,2.10296904931632,0.662524555381181,0.484875253135222,3.72783522436244,0,2.30391377494801,0.255457055208591,0.239630249011841,1.19980546198682,0.381210681219194,2.24685959107234,0,0.125654352112864,0.695297280769106,0.511430914660661,1.45451631191692,0.811206315338788,3.46253837091075,1.7416975885413,1.51633655060205,1.26265113531884,0.390361328888111,0.919608417733892,0.180062129805349,0.60281927134286,2.24520447199382,0.896796041993948,1.68663104207512,2.84573707812917,0.215567992932842,1.13463648100692,0.703804496655795,0.876782929710299,1.39023624612799,2.089512999133,2.05782136407943,0.995171334092466,0.702213187313235,0,0.284163499395593,1.24275463521301,1.17263029990548,1.44049649168812,1.89395788468168,2.16440654922144,2.62254091908543,2.09280550275367,2.68273401399619,2.80236821681207,3.29119699826961,3.2833492815819,4.45878452502207,3.50879969820798,2.85415149878366,3.62357330653004,2.10289948564127,0.411618449517138,0,0.264450566663544,0.639864751605702,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0.951128130562796,1.42358718463353,0.658795818896044,1.25667604400135,1.1937388322469,2.14460495831032,0,0.648414149624083,0.597423819763102,1.51734320762465,0.913988100877831,0,0.407302655690628,1.35766741017338,2.87556861550306,3.66771915320692,3.39503340353085,3.61097074035162,3.45512058981041,3.55743152504579,0,0.196558995113203,0.224862112384854,1.01430060694251,0.964708639009667,0.763877555344259,2.5892652370573,1.45921704097532,2.19649130550465,2.87536413054709,5.58211421502755,3.74445207737473,4.54641980304801,3.94674309748207,4.82443521363367,6.28160846566456,1.32643988239339,0.651859905768103,1.18821560042632,0.704070744865506,1.34005005953453,2.38043640886014,5.26860849216057,4.41378403497335,6.64394068946325,6.218735977642,5.89907932976657,4.31712454664739,4.19482269886384,0,1.08781136763742,1.47529281905711,1.93155722413313,2.0871576698413,2.46144541843627,1.14754461763673,2.27223834483936,0.631016438832513,0.390438744296638,0.646270193198397,0.716906393857656,0.668396022247182,1.69845918473299,1.61924280669958,1.46127928955656,0.395287777946524,2.57057053137446,1.41940085208269,2.67098405500883,2.76907830901079,2.8044920905331,1.32745138339963,0.242780636154981,1.209294227859,1.32023555829129,0.590603785761546,1.53717573971964,2.06742634534577,2.18120237686503,2.13898427030833,1.26414703174326,3.16255825724996,2.06271086496374,0.340439605753788,0.900305470156551,1.16422815404479,1.28602221018955,0.532020700926821,2.14042581122485,0.822745103010605,0.608929898229199,10.3255551548033,7.62595455109753,1.54369878638473,1.6488625294148,3.55221738730992,1.44751019827574,1.19372344003136,1.47726809770555,1.45740418314925,2.96680483216816,0,1.44470807574256,1.11116716421827,0,0.546776910884101,0.228778173206523,0.339956859987711,0.419854356970974,0.276399947608848,1.90934123603023,0.316335993581135,0.609958401380546,0.972048067396211,1.25452977608681,0.655087691238533,1.48350781023303,1.57041565878138,1.04702376793612,0.518459893167171,1.24267862617385,0,1.19613236835183,0.496375471371293,1.16670713006429,1.42075805825504,1.520605129417,3.63807439801837,1.5624526181274,0.943734099831398,0.241584120826006,0.288030006257865,0,0.608175645870493,1.02710957164827,0.389762468933385,0.358053391334963,0,0.480781798079875,0.147689527174577,0.201932899896295,0.381034033274999,0.100826185136841,0.0974578807397524,0.192423683280659,0.467507608726276,2.49403421976732,1.77588762699252,0.538283139656854,1.34307693091263,1.73870634628971,3.37828455812128,1.46521299413812,1.92931541171159,2.00628841614145,0.564751842617067,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,1.35096360967266,0.906284817968409,0,0.415149390336707,0.399024873401031,0.512200817262403,1.94485373654635,0.838452650511929,1.83843508450014,0.666740183404846,0.206035057238894,0.64183841918363,2.02157769411038,0,1.13175804831646,0.842773567228942,1.08842759088278,1.60819313075717,0.952587382566147,1.50649623728312,1.92909220463705,0.824171801606613,0.294397840268795,1.02860775715625,1.77475806159337,2.38436189947321,0.726732083161643,0.658765662907314,0.930760686808441,0.914639864363863,1.05227884575137,0.950628796921032,1.12228454331548,0.711810108745045,1.97008964751127,0.818462086339379,1.23949472948773,1.15743966588685,2.49810577937946,1.40358965067245,4.08255002691767,1.91288332068843,3.97064554415128,1.15933917810211|short_description=p3@Rassf8}}
|EntrezGene=71323
|HGNC=
|MCL_coexpression_id=3552
|UniProt=Q8CJ96
|association_with_transcript=91bp_to_ENSMUST00000111704_5end
|description=CAGE_peak_3_at_Rassf8_5end
|id=chr6:145695359..145695389,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!3.52e-11!47;UBERON:0005177!5.33e-11!85;UBERON:0002100!7.30e-11!98;UBERON:0009569!2.98e-10!66;UBERON:0000466!4.34e-08!79;UBERON:0005256!2.84e-07!47;UBERON:0004111!2.99e-07!122;UBERON:0005172!3.97e-07!49;UBERON:0005173!3.97e-07!49;UBERON:0002417!3.97e-07!49;UBERON:0000916!3.97e-07!49;UBERON:0000926!5.80e-07!193;UBERON:0004120!5.80e-07!193;UBERON:0006603!5.80e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.80e-12,47;UBERON:0005177,6.14e-12,79;UBERON:0002100,6.36e-12,90;UBERON:0009569,2.24e-10,66;UBERON:0003104,1.30e-08,61;UBERON:0009142,1.30e-08,61;UBERON:0005256,4.74e-08,45;UBERON:0005172,1.12e-07,49;UBERON:0005173,1.12e-07,49;UBERON:0002417,1.12e-07,49;UBERON:0000916,1.12e-07,49;UBERON:0004111,2.06e-07,122;UBERON:0004535,2.46e-07,23;UBERON:0001009,2.46e-07,23;UBERON:0004872,5.03e-07,33
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,3.04130793658544,3.12029478674859,0,0.218025156380447,1.09843091367236,0.58328969722285,1.39986421625363,0,0,0,0,0,0.85960031981627,1.54701627683233,0,0,0,1.35537812827653,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,1.71390590642282,0,0,0,0,2.20231761998777,0.893811366596314,0.46081959976873,0,0,0.52091337055676,1.3959149950069,0,0.916789486660861,0,0.569486723196412,1.1183966749518,0.757261933331841,1.5870027622425,1.73918693221007,2.58127163094416,7.47968467078526,1.07940638327563,5.19821133958135,3.13618820968135,1.40444420131752,0.511290967734173,2.07828803682295,1.06001872353102,1.26759077799012,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,2.51204535381932,0.258937883647172,2.67195850316685,1.04091196059682,1.52232739156071,2.30615497256059,1.65794904607885,4.46837087115678,4.77533047052767,3.21353458054686,1.73519228303894,0,2.10296904931632,0.662524555381181,0.484875253135222,3.72783522436244,0,2.30391377494801,0.255457055208591,0.239630249011841,1.19980546198682,0.381210681219194,2.24685959107234,0,0.125654352112864,0.695297280769106,0.511430914660661,1.45451631191692,0.811206315338788,3.46253837091075,1.7416975885413,1.51633655060205,1.26265113531884,0.390361328888111,0.919608417733892,0.180062129805349,0.60281927134286,2.24520447199382,0.896796041993948,1.68663104207512,2.84573707812917,0.215567992932842,1.13463648100692,0.703804496655795,0.876782929710299,1.39023624612799,2.089512999133,2.05782136407943,0.995171334092466,0.702213187313235,0,0.284163499395593,1.24275463521301,1.17263029990548,1.44049649168812,1.89395788468168,2.16440654922144,2.62254091908543,2.09280550275367,2.68273401399619,2.80236821681207,3.29119699826961,3.2833492815819,4.45878452502207,3.50879969820798,2.85415149878366,3.62357330653004,2.10289948564127,0.411618449517138,0,0.264450566663544,0.639864751605702,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0.951128130562796,1.42358718463353,0.658795818896044,1.25667604400135,1.1937388322469,2.14460495831032,0,0.648414149624083,0.597423819763102,1.51734320762465,0.913988100877831,0,0.407302655690628,1.35766741017338,2.87556861550306,3.66771915320692,3.39503340353085,3.61097074035162,3.45512058981041,3.55743152504579,0,0.196558995113203,0.224862112384854,1.01430060694251,0.964708639009667,0.763877555344259,2.5892652370573,1.45921704097532,2.19649130550465,2.87536413054709,5.58211421502755,3.74445207737473,4.54641980304801,3.94674309748207,4.82443521363367,6.28160846566456,1.32643988239339,0.651859905768103,1.18821560042632,0.704070744865506,1.34005005953453,2.38043640886014,5.26860849216057,4.41378403497335,6.64394068946325,6.218735977642,5.89907932976657,4.31712454664739,4.19482269886384,0,1.08781136763742,1.47529281905711,1.93155722413313,2.0871576698413,2.46144541843627,1.14754461763673,2.27223834483936,0.631016438832513,0.390438744296638,0.646270193198397,0.716906393857656,0.668396022247182,1.69845918473299,1.61924280669958,1.46127928955656,0.395287777946524,2.57057053137446,1.41940085208269,2.67098405500883,2.76907830901079,2.8044920905331,1.32745138339963,0.242780636154981,1.209294227859,1.32023555829129,0.590603785761546,1.53717573971964,2.06742634534577,2.18120237686503,2.13898427030833,1.26414703174326,3.16255825724996,2.06271086496374,0.340439605753788,0.900305470156551,1.16422815404479,1.28602221018955,0.532020700926821,2.14042581122485,0.822745103010605,0.608929898229199,10.3255551548033,7.62595455109753,1.54369878638473,1.6488625294148,3.55221738730992,1.44751019827574,1.19372344003136,1.47726809770555,1.45740418314925,2.96680483216816,0,1.44470807574256,1.11116716421827,0,0.546776910884101,0.228778173206523,0.339956859987711,0.419854356970974,0.276399947608848,1.90934123603023,0.316335993581135,0.609958401380546,0.972048067396211,1.25452977608681,0.655087691238533,1.48350781023303,1.57041565878138,1.04702376793612,0.518459893167171,1.24267862617385,0,1.19613236835183,0.496375471371293,1.16670713006429,1.42075805825504,1.520605129417,3.63807439801837,1.5624526181274,0.943734099831398,0.241584120826006,0.288030006257865,0,0.608175645870493,1.02710957164827,0.389762468933385,0.358053391334963,0,0.480781798079875,0.147689527174577,0.201932899896295,0.381034033274999,0.100826185136841,0.0974578807397524,0.192423683280659,0.467507608726276,2.49403421976732,1.77588762699252,0.538283139656854,1.34307693091263,1.73870634628971,3.37828455812128,1.46521299413812,1.92931541171159,2.00628841614145,0.564751842617067,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,1.35096360967266,0.906284817968409,0,0.415149390336707,0.399024873401031,0.512200817262403,1.94485373654635,0.838452650511929,1.83843508450014,0.666740183404846,0.206035057238894,0.64183841918363,2.02157769411038,0,1.13175804831646,0.842773567228942,1.08842759088278,1.60819313075717,0.952587382566147,1.50649623728312,1.92909220463705,0.824171801606613,0.294397840268795,1.02860775715625,1.77475806159337,2.38436189947321,0.726732083161643,0.658765662907314,0.930760686808441,0.914639864363863,1.05227884575137,0.950628796921032,1.12228454331548,0.711810108745045,1.97008964751127,0.818462086339379,1.23949472948773,1.15743966588685,2.49810577937946,1.40358965067245,4.08255002691767,1.91288332068843,3.97064554415128,1.15933917810211
|short_description=p3@Rassf8
}}

Revision as of 09:22, 14 September 2013

Short description:p3@Rassf8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rassf8_5end
Coexpression cluster:MCL_coexpression_mm9:3552
Association with transcript: 91bp_to_ENSMUST00000111704_5end
EntrezGene:Rassf8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rassf8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I34.78
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G14.46
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.88
kidney, neonate N10.CNhs11206.758-6D53.67
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:145695359..145695389,%2B&oldid=3031275"