FFCP PHASE1:Mm9::chr6:48791017..48791034,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=65963|HGNC=|MCL_coexpression_id=1828|UniProt=Q9R1Q6|association_with_transcript=-30bp_to_ENSMUST00000164733,NM_023056,uc009bvu.2_5end|description=CAGE_peak_1_at_Tmem176b_5end|id=chr6:48791017..48791034,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!6.27e-14!66;UBERON:0002100!2.06e-12!98;UBERON:0005177!2.41e-11!85;UBERON:0005172!6.67e-10!49;UBERON:0005173!6.67e-10!49;UBERON:0002417!6.67e-10!49;UBERON:0000916!6.67e-10!49;UBERON:0002365!9.48e-10!25;UBERON:0002330!9.48e-10!25;UBERON:0005256!1.53e-09!47;UBERON:0003104!4.85e-09!131;UBERON:0009142!4.85e-09!131;UBERON:0000466!1.60e-08!79;UBERON:0002107!5.01e-08!22;UBERON:0007499!5.01e-08!22;UBERON:0006925!5.01e-08!22;UBERON:0009497!5.01e-08!22;UBERON:0000015!5.01e-08!22;UBERON:0002423!5.01e-08!22;UBERON:0006235!5.01e-08!22;UBERON:0008835!5.01e-08!22;UBERON:0003894!5.01e-08!22;UBERON:0004161!5.01e-08!22;UBERON:0008836!5.01e-08!22;UBERON:0009854!8.14e-08!23;UBERON:0009856!8.14e-08!23;UBERON:0003914!1.22e-07!47;UBERON:0001007!2.51e-07!128;UBERON:0001555!2.51e-07!128;UBERON:0007026!2.51e-07!128;UBERON:0000926!2.69e-07!193;UBERON:0004120!2.69e-07!193;UBERON:0006603!2.69e-07!193;UBERON:0004119!3.42e-07!130;UBERON:0000925!3.42e-07!130;UBERON:0006595!3.42e-07!130;UBERON:0004921!9.93e-07!126;UBERON:0004185!9.93e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.24e-15,90;UBERON:0009569,6.24e-14,66;UBERON:0005177,7.27e-14,79;UBERON:0003104,3.09e-11,61;UBERON:0009142,3.09e-11,61;UBERON:0005256,1.86e-10,45;UBERON:0005172,6.65e-10,49;UBERON:0005173,6.65e-10,49;UBERON:0002417,6.65e-10,49;UBERON:0000916,6.65e-10,49;UBERON:0002365,9.44e-10,25;UBERON:0002330,9.44e-10,25;UBERON:0002107,4.99e-08,22;UBERON:0007499,4.99e-08,22;UBERON:0006925,4.99e-08,22;UBERON:0009497,4.99e-08,22;UBERON:0000015,4.99e-08,22;UBERON:0002423,4.99e-08,22;UBERON:0006235,4.99e-08,22;UBERON:0008835,4.99e-08,22;UBERON:0003894,4.99e-08,22;UBERON:0004161,4.99e-08,22;UBERON:0008836,4.99e-08,22;UBERON:0009854,8.11e-08,23;UBERON:0009856,8.11e-08,23;UBERON:0003914,1.21e-07,47;UBERON:0001007,6.34e-07,116;UBERON:0001555,6.34e-07,116;UBERON:0007026,6.34e-07,116;UBERON:0004119,8.76e-07,118;UBERON:0000925,8.76e-07,118;UBERON:0006595,8.76e-07,118|phase1_expression=25.4636666896622,62.4665979674456,60.9698980781978,3.62957053568196,7.01254021924886,54.5607633713642,99.0517596125029,2.06597317506522,0.140788722151667,0.234064526321993,0,0,0.513602189793617,0.524522414513984,3.66420737997229,4.45445588257617,0.699561878128147,5.0473946457318,5.21034847701807,5.51706547337439,117.699913569081,34.0567962619037,38.1351692142846,123.194165550923,138.563205764571,89.0059544378281,98.213735124269,87.0503780050992,26.0332084655232,13.1055667475164,127.938504648111,0,0,0,22.5304263405994,22.275442478038,17.5585646385637,2.51118978442145,2.3440060335714,2.61761871986899,0.588231488031014,0,0,152.964633840326,167.576067305858,187.034140452753,100.928483420897,176.164326355401,196.619133547352,257.230756475277,89.8712826834827,163.877923376068,0.838913030288682,0,1.00828139742739,256.744917163875,326.648121530183,613.134117717879,5.26022798234954,6.87688273053643,9.50747105259269,67.4300618817573,57.8041617472241,211.026483702488,220.517198852435,184.724829885986,171.371263216527,227.073018445039,3.21437798156281,2.97013064329719,3.78584930432488,21.1381728458815,23.6329338818226,3.67472397644862,3.92966431174769,2.75765635983006,3.30347642998166,6.2566795661742,7.68032666281217,8.30883612700221,8.96578907303615,6.77187381723788,9.49222196604695,13.5063026407603,10.5430790965999,12.0797720044204,15.8032565687004,11.183966749518,9.61722655331437,11.4113055761246,127.540375028738,166.061808257408,87.0363307145921,96.6068713031693,170.241421371289,102.59815714529,110.108425383293,0.852151612890289,0.779358013808606,0.35333957451034,15.7744630149882,14.115912515575,0,0,148.07987205167,129.973610988726,142.557893494169,111.443466605803,137.496016216648,237.804306781849,44.5857289788969,39.8849776588905,35.9760175719451,45.3675148063394,39.5098055975968,93.4959439492786,101.844326706562,26.3170829594239,27.4229271104461,26.6915302413225,19.654895142975,29.0925151881133,37.2783522436244,4.09893115816166,4.60782754989601,104.737392635522,41.2164028300366,57.5906621753671,28.9720117726587,11.833460512981,12.8100168789215,2.51308704225729,8.69121600961382,5.62574006126727,12.6750707181332,6.81413304884582,54.9932564791708,56.9783925394226,144.810140582496,24.8321389946039,24.4626432769883,31.9563925162527,33.3114940139896,31.3466021098287,22.4520447199382,23.7010382526972,28.0168156433589,22.5071932542944,13.5807835547691,21.1798809787958,25.5129130037726,38.3592531748256,20.8535436919198,31.6909471535172,18.9319565495308,38.4136134959692,37.9195121149147,30.6244009466511,17.9023004619223,49.7101854085205,55.1136240955576,51.1376254549282,57.5289707472061,36.4013828732697,34.8643675125475,28.13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| ||
|EntrezGene=65963 | |||
|HGNC= | |||
|MCL_coexpression_id=1828 | |||
|UniProt=Q9R1Q6 | |||
|association_with_transcript=-30bp_to_ENSMUST00000164733,NM_023056,uc009bvu.2_5end | |||
|description=CAGE_peak_1_at_Tmem176b_5end | |||
|id=chr6:48791017..48791034,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!6.27e-14!66;UBERON:0002100!2.06e-12!98;UBERON:0005177!2.41e-11!85;UBERON:0005172!6.67e-10!49;UBERON:0005173!6.67e-10!49;UBERON:0002417!6.67e-10!49;UBERON:0000916!6.67e-10!49;UBERON:0002365!9.48e-10!25;UBERON:0002330!9.48e-10!25;UBERON:0005256!1.53e-09!47;UBERON:0003104!4.85e-09!131;UBERON:0009142!4.85e-09!131;UBERON:0000466!1.60e-08!79;UBERON:0002107!5.01e-08!22;UBERON:0007499!5.01e-08!22;UBERON:0006925!5.01e-08!22;UBERON:0009497!5.01e-08!22;UBERON:0000015!5.01e-08!22;UBERON:0002423!5.01e-08!22;UBERON:0006235!5.01e-08!22;UBERON:0008835!5.01e-08!22;UBERON:0003894!5.01e-08!22;UBERON:0004161!5.01e-08!22;UBERON:0008836!5.01e-08!22;UBERON:0009854!8.14e-08!23;UBERON:0009856!8.14e-08!23;UBERON:0003914!1.22e-07!47;UBERON:0001007!2.51e-07!128;UBERON:0001555!2.51e-07!128;UBERON:0007026!2.51e-07!128;UBERON:0000926!2.69e-07!193;UBERON:0004120!2.69e-07!193;UBERON:0006603!2.69e-07!193;UBERON:0004119!3.42e-07!130;UBERON:0000925!3.42e-07!130;UBERON:0006595!3.42e-07!130;UBERON:0004921!9.93e-07!126;UBERON:0004185!9.93e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.24e-15,90;UBERON:0009569,6.24e-14,66;UBERON:0005177,7.27e-14,79;UBERON:0003104,3.09e-11,61;UBERON:0009142,3.09e-11,61;UBERON:0005256,1.86e-10,45;UBERON:0005172,6.65e-10,49;UBERON:0005173,6.65e-10,49;UBERON:0002417,6.65e-10,49;UBERON:0000916,6.65e-10,49;UBERON:0002365,9.44e-10,25;UBERON:0002330,9.44e-10,25;UBERON:0002107,4.99e-08,22;UBERON:0007499,4.99e-08,22;UBERON:0006925,4.99e-08,22;UBERON:0009497,4.99e-08,22;UBERON:0000015,4.99e-08,22;UBERON:0002423,4.99e-08,22;UBERON:0006235,4.99e-08,22;UBERON:0008835,4.99e-08,22;UBERON:0003894,4.99e-08,22;UBERON:0004161,4.99e-08,22;UBERON:0008836,4.99e-08,22;UBERON:0009854,8.11e-08,23;UBERON:0009856,8.11e-08,23;UBERON:0003914,1.21e-07,47;UBERON:0001007,6.34e-07,116;UBERON:0001555,6.34e-07,116;UBERON:0007026,6.34e-07,116;UBERON:0004119,8.76e-07,118;UBERON:0000925,8.76e-07,118;UBERON:0006595,8.76e-07,118 | |||
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| |||
|short_description=p1@Tmem176b | |||
}} |
Revision as of 10:10, 14 September 2013
Short description: | p1@Tmem176b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem176b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1828 |
Association with transcript: | -30bp_to_ENSMUST00000164733, NM_023056, uc009bvu.2_5end |
EntrezGene: | Tmem176b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 1.24e-15 | 90 |
subdivision of trunk | 6.24e-14 | 66 |
trunk region element | 7.27e-14 | 79 |
mesenchyme | 3.09e-11 | 61 |
entire embryonic mesenchyme | 3.09e-11 | 61 |
trunk mesenchyme | 1.86e-10 | 45 |
abdomen element | 6.65e-10 | 49 |
abdominal segment element | 6.65e-10 | 49 |
abdominal segment of trunk | 6.65e-10 | 49 |
abdomen | 6.65e-10 | 49 |
exocrine gland | 9.44e-10 | 25 |
exocrine system | 9.44e-10 | 25 |
liver | 4.99e-08 | 22 |
epithelial sac | 4.99e-08 | 22 |
digestive gland | 4.99e-08 | 22 |
epithelium of foregut-midgut junction | 4.99e-08 | 22 |
anatomical boundary | 4.99e-08 | 22 |
hepatobiliary system | 4.99e-08 | 22 |
foregut-midgut junction | 4.99e-08 | 22 |
hepatic diverticulum | 4.99e-08 | 22 |
liver primordium | 4.99e-08 | 22 |
septum transversum | 4.99e-08 | 22 |
liver bud | 4.99e-08 | 22 |
digestive tract diverticulum | 8.11e-08 | 23 |
sac | 8.11e-08 | 23 |
epithelial tube | 1.21e-07 | 47 |
digestive system | 6.34e-07 | 116 |
digestive tract | 6.34e-07 | 116 |
primitive gut | 6.34e-07 | 116 |
endoderm-derived structure | 8.76e-07 | 118 |
endoderm | 8.76e-07 | 118 |
presumptive endoderm | 8.76e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.