FFCP PHASE1:Mm9::chr6:52175944..52175955,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:52175944..52175955,-|id=chr6:52175944..52175955,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,3.58e-15,3;CL:0002611,3.90e-11,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!3.05e-19!21;UBERON:0002113!3.42e-12!14;UBERON:0003918!3.42e-12!14;UBERON:0005095!3.42e-12!14;UBERON:0007687!3.42e-12!14;UBERON:0006554!2.83e-10!16;UBERON:0002240!4.70e-10!6;UBERON:0005174!4.70e-10!6;UBERON:0001137!4.70e-10!6;UBERON:0001008!1.73e-09!17;UBERON:0001948!1.31e-08!5;UBERON:0002315!1.31e-08!5;UBERON:0003103!9.31e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.07e-58,21;UBERON:0002113,2.94e-34,14;UBERON:0003918,2.94e-34,14;UBERON:0011143,2.94e-34,14;UBERON:0005095,2.94e-34,14;UBERON:0007687,2.94e-34,14;UBERON:0002240,2.19e-29,6;UBERON:0005174,2.19e-29,6;UBERON:0001137,2.19e-29,6;UBERON:0003103,1.73e-27,43;UBERON:0006554,2.31e-26,18;UBERON:0001008,6.61e-25,19;UBERON:0001948,1.24e-24,5;UBERON:0002315,1.24e-24,5;UBERON:0002257,3.58e-15,3;UBERON:0003076,1.59e-14,12;UBERON:0003057,1.59e-14,12;UBERON:0002256,3.90e-11,2;UBERON:0005172,8.34e-09,49;UBERON:0005173,8.34e-09,49;UBERON:0002417,8.34e-09,49;UBERON:0000916,8.34e-09,49;UBERON:0003104,8.70e-07,61;UBERON:0009142,8.70e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.595745707205312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,3.3130281142742,0,0,0,0,0,0,0,0,0,0,0,0,2.35702868378934,1.70846016958924,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,1.07783996466421,0.189106080167819,0.703804496655795,0,0.556094498451196,0,0,0,0.702213187313235,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,2.65535061334314,1.71372768914593,4.50830942692322,1.4255592949172,2.13347735884388,3.22624771495465,1.13825766823663,1.47610147979602,2.19798218977925,3.33172342588861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,2.22510362412612,0,0,0,0,0,0,0.169978429993855,2.09927178485487,0.414599921413271,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0.476293691283074,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0|short_description=p@chr6:52175944..52175955,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:52175944..52175955,- | |||
|id=chr6:52175944..52175955,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.58e-15,3;CL:0002611,3.90e-11,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!3.05e-19!21;UBERON:0002113!3.42e-12!14;UBERON:0003918!3.42e-12!14;UBERON:0005095!3.42e-12!14;UBERON:0007687!3.42e-12!14;UBERON:0006554!2.83e-10!16;UBERON:0002240!4.70e-10!6;UBERON:0005174!4.70e-10!6;UBERON:0001137!4.70e-10!6;UBERON:0001008!1.73e-09!17;UBERON:0001948!1.31e-08!5;UBERON:0002315!1.31e-08!5;UBERON:0003103!9.31e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.07e-58,21;UBERON:0002113,2.94e-34,14;UBERON:0003918,2.94e-34,14;UBERON:0011143,2.94e-34,14;UBERON:0005095,2.94e-34,14;UBERON:0007687,2.94e-34,14;UBERON:0002240,2.19e-29,6;UBERON:0005174,2.19e-29,6;UBERON:0001137,2.19e-29,6;UBERON:0003103,1.73e-27,43;UBERON:0006554,2.31e-26,18;UBERON:0001008,6.61e-25,19;UBERON:0001948,1.24e-24,5;UBERON:0002315,1.24e-24,5;UBERON:0002257,3.58e-15,3;UBERON:0003076,1.59e-14,12;UBERON:0003057,1.59e-14,12;UBERON:0002256,3.90e-11,2;UBERON:0005172,8.34e-09,49;UBERON:0005173,8.34e-09,49;UBERON:0002417,8.34e-09,49;UBERON:0000916,8.34e-09,49;UBERON:0003104,8.70e-07,61;UBERON:0009142,8.70e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.595745707205312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,3.3130281142742,0,0,0,0,0,0,0,0,0,0,0,0,2.35702868378934,1.70846016958924,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,1.07783996466421,0.189106080167819,0.703804496655795,0,0.556094498451196,0,0,0,0.702213187313235,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,2.65535061334314,1.71372768914593,4.50830942692322,1.4255592949172,2.13347735884388,3.22624771495465,1.13825766823663,1.47610147979602,2.19798218977925,3.33172342588861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,2.22510362412612,0,0,0,0,0,0,0.169978429993855,2.09927178485487,0.414599921413271,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0.476293691283074,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0 | |||
|short_description=p@chr6:52175944..52175955,- | |||
}} |
Revision as of 10:17, 14 September 2013
Short description: | p@chr6:52175944..52175955, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:52175944..52175955, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.58e-15 | 3 |
neuron of the dorsal spinal cord | 3.90e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 2.07e-58 | 21 |
kidney | 2.94e-34 | 14 |
kidney mesenchyme | 2.94e-34 | 14 |
upper urinary tract | 2.94e-34 | 14 |
kidney rudiment | 2.94e-34 | 14 |
kidney field | 2.94e-34 | 14 |
spinal cord | 2.19e-29 | 6 |
dorsal region element | 2.19e-29 | 6 |
dorsum | 2.19e-29 | 6 |
compound organ | 1.73e-27 | 43 |
urinary system structure | 2.31e-26 | 18 |
renal system | 6.61e-25 | 19 |
regional part of spinal cord | 1.24e-24 | 5 |
gray matter of spinal cord | 1.24e-24 | 5 |
ventral horn of spinal cord | 3.58e-15 | 3 |
posterior neural tube | 1.59e-14 | 12 |
chordal neural plate | 1.59e-14 | 12 |
dorsal horn of spinal cord | 3.90e-11 | 2 |
abdomen element | 8.34e-09 | 49 |
abdominal segment element | 8.34e-09 | 49 |
abdominal segment of trunk | 8.34e-09 | 49 |
abdomen | 8.34e-09 | 49 |
mesenchyme | 8.70e-07 | 61 |
entire embryonic mesenchyme | 8.70e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.