FFCP PHASE1:Mm9::chr6:71582981..71582985,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104263|HGNC=|MCL_coexpression_id=572|UniProt=Q6PCM1|association_with_transcript=-82bp_to_ENSMUST00000065509,NM_001038695,uc009cgz.2_5end|description=CAGE_peak_10_at_Kdm3a_5end|id=chr6:71582981..71582985,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.13e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!4.99e-09!14;UBERON:0004176!2.56e-08!17;UBERON:0009196!2.56e-08!17;UBERON:0009117!2.56e-08!17;UBERON:0003135!3.07e-08!15;UBERON:0000991!1.10e-07!18;UBERON:0005564!1.10e-07!18;UBERON:0003101!1.50e-07!16;UBERON:0000079!1.50e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.69e-15,14;UBERON:0003135,7.25e-14,15;UBERON:0003101,4.65e-13,16;UBERON:0000079,4.65e-13,16;UBERON:0004176,2.40e-12,17;UBERON:0009196,2.40e-12,17;UBERON:0009117,2.40e-12,17;UBERON:0000991,1.03e-11,18;UBERON:0005564,1.03e-11,18;UBERON:0003133,5.26e-09,24;UBERON:0005156,2.23e-08,26;UBERON:0000990,2.23e-08,26|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.935476191661768,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11066703153331,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0,0,2.81846469342095,0.448549638131936,0,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,3.62376181239009,3.16833006883652,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p10@Kdm3a}} | ||
|EntrezGene=104263 | |||
|HGNC= | |||
|MCL_coexpression_id=572 | |||
|UniProt=Q6PCM1 | |||
|association_with_transcript=-82bp_to_ENSMUST00000065509,NM_001038695,uc009cgz.2_5end | |||
|description=CAGE_peak_10_at_Kdm3a_5end | |||
|id=chr6:71582981..71582985,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.13e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!4.99e-09!14;UBERON:0004176!2.56e-08!17;UBERON:0009196!2.56e-08!17;UBERON:0009117!2.56e-08!17;UBERON:0003135!3.07e-08!15;UBERON:0000991!1.10e-07!18;UBERON:0005564!1.10e-07!18;UBERON:0003101!1.50e-07!16;UBERON:0000079!1.50e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.69e-15,14;UBERON:0003135,7.25e-14,15;UBERON:0003101,4.65e-13,16;UBERON:0000079,4.65e-13,16;UBERON:0004176,2.40e-12,17;UBERON:0009196,2.40e-12,17;UBERON:0009117,2.40e-12,17;UBERON:0000991,1.03e-11,18;UBERON:0005564,1.03e-11,18;UBERON:0003133,5.26e-09,24;UBERON:0005156,2.23e-08,26;UBERON:0000990,2.23e-08,26 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.935476191661768,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11066703153331,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0,0,2.81846469342095,0.448549638131936,0,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,3.62376181239009,3.16833006883652,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p10@Kdm3a | |||
}} |
Revision as of 10:33, 14 September 2013
Short description: | p10@Kdm3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Kdm3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:572 |
Association with transcript: | -82bp_to_ENSMUST00000065509, NM_001038695, uc009cgz.2_5end |
EntrezGene: | Kdm3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 8.69e-15 | 14 |
male reproductive organ | 7.25e-14 | 15 |
male organism | 4.65e-13 | 16 |
male reproductive system | 4.65e-13 | 16 |
external genitalia | 2.40e-12 | 17 |
indifferent external genitalia | 2.40e-12 | 17 |
indifferent gonad | 2.40e-12 | 17 |
gonad | 1.03e-11 | 18 |
gonad primordium | 1.03e-11 | 18 |
reproductive organ | 5.26e-09 | 24 |
reproductive structure | 2.23e-08 | 26 |
reproductive system | 2.23e-08 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.