FFCP PHASE1:Mm9::chr6:87969965..87969966,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19349|HGNC=|MCL_coexpression_id=325|UniProt=|association_with_transcript=-176bp_to_uc009cuw.1,uc009cux.1_5end|description=CAGE_peak_3_at_Rab7_5end|id=chr6:87969965..87969966,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.91e-09!193;UBERON:0004120!1.91e-09!193;UBERON:0006603!1.91e-09!193;UBERON:0001048!3.86e-08!147;UBERON:0000077!9.66e-08!97;UBERON:0003104!2.00e-07!131;UBERON:0009142!2.00e-07!131;UBERON:0001041!4.07e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0001041,9.82e-08,80|phase1_expression=0.320297694209588,0.697950815278722,0,0,0,0.16787927191189,0,0.774739940649458,0.985521055061667,1.17032263160997,0.68487187290202,0.398860794976682,0.513602189793617,0.437102012094987,0.333109761815663,0.202475267389826,0,1.10411757875383,0.548457734422955,0.84877930359606,1.27564935226605,0.397163804803541,0.522399578277871,0,0.22940928106717,0,0.430761996159075,0,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,1.67412652294763,1.5626706890476,0.523523743973798,1.17646297606203,2.73218193983378,0.971020706062307,0.503587271902309,0.405507724878058,1.10128051297009,0,0.218025156380447,0,0,0,0,0.671130424230945,0,1.00828139742739,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0,0.244981598429908,0.0958454710182364,0,0,0.383062014255563,0,0.131886287730194,0.548925861614458,0,0,0,0.30559649555362,0.294628585473668,0.284743361598206,0,0.075726193333184,0.226714680320357,2.89864488701678,0,0,0.539703191637817,0.649776417447669,1.34408066129201,0.561777680527007,0.170430322578058,0.259786004602869,0,0,0,2.54805239706646,0,0.216491041011214,0,0,0.68510327831436,0.517875767294343,0.445326417194474,0.520455980298408,1.21786191324856,1.15307748628029,0.452167921657868,1.64624189989987,0.376999773989026,5.19109432242185,0.578397427679647,2.65383165584962,0.970601099684455,0.662524555381181,0.484875253135222,0,0.292780797011547,1.67557365450764,0.510914110417183,1.67741174308288,0,1.39777249780371,0.449371918214468,0.915001205637253,0.879580464790051,0.347648640384553,0.767146371990992,0,1.1356888414743,0.712875546952214,1.36847667671102,2.0217820674694,0.841767423545896,0.520481771850815,0.919608417733892,0.180062129805349,2.10986744970001,1.42876648217788,2.43416068541215,0.937017245597288,2.06962696591213,0.431135985865684,0.756424320671277,0.175951124163949,0.657587197282725,1.94633074457919,0.348252166522167,0.823128545631774,1.39323986772945,0,0.257347907114715,2.55747149456033,1.03562886267751,0.703578179943289,0.900310307305074,0.710234206755631,0.983821158737019,1.07986979021165,1.62773761325285,2.41446061259657,2.10177616260905,1.31647879930784,1.97000956894914,1.86458261955468,2.92399974850665,1.97595103761946,1.07365135008297,0.841159794256509,0.308713837137853,0.660837565967596,0.793351699990633,0.213288250535234,0.232236671860439,0.902072229254653,1.81515172161008,1.11189021922435,0.760902504450237,2.37264530772256,1.31759163779209,1.75934646160189,0.397912944082302,1.55971269695296,3.59527763461689,1.29682829924817,1.39398891278057,0,1.25673363870702,0,1.01825663922657,0.775809948670503,1.26244475802573,1.7706230394792,0.738050739898011,2.35498091762062,1.85095745882701,0.889357881261447,0.500535317148282,1.37591296579242,0.449724224769707,1.01430060694251,1.20588579876208,0.763877555344259,0.575392274901621,5.35046248357617,1.37280706594041,7.18841032636773,1.48856379067401,2.18426371180192,1.01031551178845,1.25578189465339,1.92977408545347,1.10851914099963,0.568474235311454,0.325929952884052,1.18821560042632,1.40814148973101,0.837531287209079,0.952174563544055,1.95133647857799,1.7339865851681,2.6575762757853,2.07291199254733,2.45794972073607,2.93564469172023,3.32692834737477,0,1.63171705145613,1.47529281905711,1.93155722413313,0,0.703270119553219,0,1.76729649043061,0.631016438832513,0.390438744296638,0.215423397732799,0,0.668396022247182,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0.851640511249612,0.178065603667255,0.325773918707152,1.64970122972535,0,0.485561272309963,0.302323556964751,0.943025398779491,0.295301892880773,0.307435147943927,0.516856586336442,1.81766864738753,1.78248689192361,3.79244109522979,0,1.03135543248187,2.38307724027652,0.36012218806262,0.517434735131018,0.214337035031592,0.886701168211368,0.891844088010353,1.31639216481697,1.2178597964584,1.17335854031855,1.90648863777438,0.661585194164886,0.98931751764888,4.19807509409354,1.5078231232039,1.90995750405018,0.984845398470368,1.45740418314925,0.741701208042039,1.19609616558497,0.206386867963223,0.925972636848558,1.69531611304222,2.1871076435364,2.28778173206523,0.679913719975421,0.979660166265606,1.65839968565309,1.90934123603023,0.316335993581135,0.813277868507395,1.51207477150522,1.46361807210128,1.52853794622324,1.61837215661785,2.0663363931334,0.785267825952089,1.68499465279331,1.86401793926078,0.56369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| ||
|EntrezGene=19349 | |||
|HGNC= | |||
|MCL_coexpression_id=325 | |||
|UniProt= | |||
|association_with_transcript=-176bp_to_uc009cuw.1,uc009cux.1_5end | |||
|description=CAGE_peak_3_at_Rab7_5end | |||
|id=chr6:87969965..87969966,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.91e-09!193;UBERON:0004120!1.91e-09!193;UBERON:0006603!1.91e-09!193;UBERON:0001048!3.86e-08!147;UBERON:0000077!9.66e-08!97;UBERON:0003104!2.00e-07!131;UBERON:0009142!2.00e-07!131;UBERON:0001041!4.07e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,9.82e-08,80 | |||
|phase1_expression=0.320297694209588,0.697950815278722,0,0,0,0.16787927191189,0,0.774739940649458,0.985521055061667,1.17032263160997,0.68487187290202,0.398860794976682,0.513602189793617,0.437102012094987,0.333109761815663,0.202475267389826,0,1.10411757875383,0.548457734422955,0.84877930359606,1.27564935226605,0.397163804803541,0.522399578277871,0,0.22940928106717,0,0.430761996159075,0,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,1.67412652294763,1.5626706890476,0.523523743973798,1.17646297606203,2.73218193983378,0.971020706062307,0.503587271902309,0.405507724878058,1.10128051297009,0,0.218025156380447,0,0,0,0,0.671130424230945,0,1.00828139742739,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0,0.244981598429908,0.0958454710182364,0,0,0.383062014255563,0,0.131886287730194,0.548925861614458,0,0,0,0.30559649555362,0.294628585473668,0.284743361598206,0,0.075726193333184,0.226714680320357,2.89864488701678,0,0,0.539703191637817,0.649776417447669,1.34408066129201,0.561777680527007,0.170430322578058,0.259786004602869,0,0,0,2.54805239706646,0,0.216491041011214,0,0,0.68510327831436,0.517875767294343,0.445326417194474,0.520455980298408,1.21786191324856,1.15307748628029,0.452167921657868,1.64624189989987,0.376999773989026,5.19109432242185,0.578397427679647,2.65383165584962,0.970601099684455,0.662524555381181,0.484875253135222,0,0.292780797011547,1.67557365450764,0.510914110417183,1.67741174308288,0,1.39777249780371,0.449371918214468,0.915001205637253,0.879580464790051,0.347648640384553,0.767146371990992,0,1.1356888414743,0.712875546952214,1.36847667671102,2.0217820674694,0.841767423545896,0.520481771850815,0.919608417733892,0.180062129805349,2.10986744970001,1.42876648217788,2.43416068541215,0.937017245597288,2.06962696591213,0.431135985865684,0.756424320671277,0.175951124163949,0.657587197282725,1.94633074457919,0.348252166522167,0.823128545631774,1.39323986772945,0,0.257347907114715,2.55747149456033,1.03562886267751,0.703578179943289,0.900310307305074,0.710234206755631,0.983821158737019,1.07986979021165,1.62773761325285,2.41446061259657,2.10177616260905,1.31647879930784,1.97000956894914,1.86458261955468,2.92399974850665,1.97595103761946,1.07365135008297,0.841159794256509,0.308713837137853,0.660837565967596,0.793351699990633,0.213288250535234,0.232236671860439,0.902072229254653,1.81515172161008,1.11189021922435,0.760902504450237,2.37264530772256,1.31759163779209,1.75934646160189,0.397912944082302,1.55971269695296,3.59527763461689,1.29682829924817,1.39398891278057,0,1.25673363870702,0,1.01825663922657,0.775809948670503,1.26244475802573,1.7706230394792,0.738050739898011,2.35498091762062,1.85095745882701,0.889357881261447,0.500535317148282,1.37591296579242,0.449724224769707,1.01430060694251,1.20588579876208,0.763877555344259,0.575392274901621,5.35046248357617,1.37280706594041,7.18841032636773,1.48856379067401,2.18426371180192,1.01031551178845,1.25578189465339,1.92977408545347,1.10851914099963,0.568474235311454,0.325929952884052,1.18821560042632,1.40814148973101,0.837531287209079,0.952174563544055,1.95133647857799,1.7339865851681,2.6575762757853,2.07291199254733,2.45794972073607,2.93564469172023,3.32692834737477,0,1.63171705145613,1.47529281905711,1.93155722413313,0,0.703270119553219,0,1.76729649043061,0.631016438832513,0.390438744296638,0.215423397732799,0,0.668396022247182,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0.851640511249612,0.178065603667255,0.325773918707152,1.64970122972535,0,0.485561272309963,0.302323556964751,0.943025398779491,0.295301892880773,0.307435147943927,0.516856586336442,1.81766864738753,1.78248689192361,3.79244109522979,0,1.03135543248187,2.38307724027652,0.36012218806262,0.517434735131018,0.214337035031592,0.886701168211368,0.891844088010353,1.31639216481697,1.2178597964584,1.17335854031855,1.90648863777438,0.661585194164886,0.98931751764888,4.19807509409354,1.5078231232039,1.90995750405018,0.984845398470368,1.45740418314925,0.741701208042039,1.19609616558497,0.206386867963223,0.925972636848558,1.69531611304222,2.1871076435364,2.28778173206523,0.679913719975421,0.979660166265606,1.65839968565309,1.90934123603023,0.316335993581135,0.813277868507395,1.51207477150522,1.46361807210128,1.52853794622324,1.61837215661785,2.0663363931334,0.785267825952089,1.68499465279331,1.86401793926078,0.56369293868419,0.299033092087958,0.66183396182839,0.777804753376191,1.29159823477731,0.844780627453891,0.821500670520278,1.43224823328345,1.36317147753424,0.966336483304024,0.864090018773596,0.316011120628178,0.405450430580328,0.821687657318618,1.03936658382236,1.25318686967237,0.993406773906324,2.16351809135944,1.9199638532695,1.51449674922221,2.057583779685,2.11734988787365,1.94915761479505,2.50150788264857,3.3894301632655,0.906921534460845,0,0.358855426437903,0.167884616364078,1.54551675225752,0.93841237725591,1.83151624267265,0.857473516316263,2.50786052017682,0,0,1.14579102687879,0.859265911718438,0.685082519770642,0,0,0,0.4531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| |||
|short_description=p3@Rab7 | |||
}} | |||
Revision as of 10:53, 14 September 2013
| Short description: | p3@Rab7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Rab7_5end |
| Coexpression cluster: | MCL_coexpression_mm9:325 |
| Association with transcript: | -176bp_to_uc009cuw.1, uc009cux.1_5end |
| EntrezGene: | Rab7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| foregut | 9.82e-08 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
