FFCP PHASE1:Mm9::chr7:117911577..117911614,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11717|HGNC=|UniProt=O08739|association_with_transcript=-105bp_to_ENSMUST00000170374,uc009jfl.1_5end|description=CAGE_peak_5_at_Ampd3_5end|id=chr7:117911577..117911614,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!1.24e-12!43;UBERON:0007100!4.57e-08!18;UBERON:0000948!4.57e-08!18;UBERON:0005498!4.57e-08!18;UBERON:0004140!4.57e-08!18;UBERON:0009881!4.57e-08!18;UBERON:0004141!4.57e-08!18;UBERON:0003084!4.57e-08!18;UBERON:0007005!4.57e-08!18;UBERON:0004139!4.57e-08!18;UBERON:0004291!4.57e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0003103,8.99e-13,43;UBERON:0007100,3.78e-10,18;UBERON:0000948,3.78e-10,18;UBERON:0005498,3.78e-10,18;UBERON:0004140,3.78e-10,18;UBERON:0009881,3.78e-10,18;UBERON:0004141,3.78e-10,18;UBERON:0003084,3.78e-10,18;UBERON:0007005,3.78e-10,18;UBERON:0004139,3.78e-10,18;UBERON:0004291,3.78e-10,18;UBERON:0004535,4.60e-08,23;UBERON:0001009,4.60e-08,23;UBERON:0007023,2.70e-07,51|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0,2.18243053485457,3.03696432774183,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.02051948181284,0,0,1.59992422793407,0.45881856213434,0,0.430761996159075,0.861884930743556,2.66032787238923,0.504060259519861,1.33038306393183,0,0,0,1.73310971850765,0.997407872150954,1.63335485009895,1.25559489221072,0,3.66466620781659,1.76469446409304,2.04913645487534,2.42755176515577,0,0,0,2.34717403304412,0.436050312760893,0.219686182734472,0.194429899074283,2.51975558925653,0,0,0,0,0,0.573066879877513,1.03134418455488,0,0,0,0.338844532069132,1.77858959222228,0.899899717281399,1.97773272513395,0,0.299600110518405,1.15265491596466,0,0,0,2.28520787523043,1.76694832761291,0.122490799214954,0.0958454710182364,0,2.20231761998777,1.14918604276669,2.61131106535614,0.395658863190582,0.274462930807229,0,0.558365998002762,3.37657566019008,2.13917546887534,1.17851434189467,2.13557521198654,0.186399445825301,0.605809546665472,1.43585964202892,0.869593466105033,0,0,0,0,0,1.40444420131752,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.91347103775248,0,1.48442139064825,2.08182392119363,0.608930956624282,0.922461989024234,1.50722640552623,0.470354828542819,0.879666139307728,0.741584903203122,1.59059292611903,0,0,0.662524555381181,0.969750506270444,3.72783522436244,1.17112318804619,0.628340120440365,2.55457055208591,0,0,0,2.09706895166752,0.457500602818626,0.125654352112864,0.869121600961382,0.511430914660661,1.0389402227978,0.973447578406546,0.407357455401265,0.622034853050465,0,1.47309299120532,0.130120442962704,0,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0,0.776110112217047,0,0,0.351902248327898,0.43839146485515,0.556094498451196,1.39300866608867,1.23469281844766,0.199034266818493,0,0,0,0.828503090142008,0.703578179943289,1.08037236876609,2.13070262026689,2.55793501271625,2.77680803197281,5.8133486187602,4.29237442239391,1.75148013550754,2.96207729844265,6.7308660272429,5.83695428730161,8.33339928324394,5.26920276698522,6.84452735677896,0.630869845692382,0,0.991256348951394,0.528901133327089,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,1.14135375667535,2.84717436926707,0.658795818896044,1.75934646160189,0.397912944082302,1.9496408711912,0.898819408654221,1.51296634912286,0.597423819763102,0.569003702859245,0.913988100877831,1.1270773567308,0.610953983535943,1.93952487167626,0.771494018793504,1.58091342810643,5.16635517928608,3.45397201251025,1.72756029490521,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0.358794827043824,0,1.10851914099963,0,0.325929952884052,0,0.469380496577004,0.837531287209079,0.476087281772027,0,0.315270288212382,0,0.478364305972461,0.491589944147214,0.518054945597687,0.723245292907558,0,0,0,0.827810238914197,3.69266356971921,0.820481806145422,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,1.41940085208269,0.178065603667255,0.162886959353576,1.81467135269789,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0,0,0,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0,0.214337035031592,1.06404140185364,0.356737635204141,0.658196082408484,0,3.75474732901937,1.69465656691056,0.220528398054962,2.14352128823924,0.484393280087717,1.20625849856312,1.79058516004705,1.14898629821543,1.1659233465194,2.59595422814714,0,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0.139951452323658,0,2.86401185404534,0,0.609958401380546,0.432021363287205,0.836353184057875,1.09181281873089,0.269728692769641,0.578574190077352,1.30877970992015,1.8146096260851,0,0,0,0,0.194451188344048,0.516639293910924,0.337912250981556,0,0.2604087696879,0,0.241584120826006,0,0,1.41907650703115,0.616265742988964,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.228620419965,0.302478555410522,0.194915761479505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| ||
|EntrezGene=11717 | |||
|HGNC= | |||
|UniProt=O08739 | |||
|association_with_transcript=-105bp_to_ENSMUST00000170374,uc009jfl.1_5end | |||
|description=CAGE_peak_5_at_Ampd3_5end | |||
|id=chr7:117911577..117911614,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.24e-12!43;UBERON:0007100!4.57e-08!18;UBERON:0000948!4.57e-08!18;UBERON:0005498!4.57e-08!18;UBERON:0004140!4.57e-08!18;UBERON:0009881!4.57e-08!18;UBERON:0004141!4.57e-08!18;UBERON:0003084!4.57e-08!18;UBERON:0007005!4.57e-08!18;UBERON:0004139!4.57e-08!18;UBERON:0004291!4.57e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,8.99e-13,43;UBERON:0007100,3.78e-10,18;UBERON:0000948,3.78e-10,18;UBERON:0005498,3.78e-10,18;UBERON:0004140,3.78e-10,18;UBERON:0009881,3.78e-10,18;UBERON:0004141,3.78e-10,18;UBERON:0003084,3.78e-10,18;UBERON:0007005,3.78e-10,18;UBERON:0004139,3.78e-10,18;UBERON:0004291,3.78e-10,18;UBERON:0004535,4.60e-08,23;UBERON:0001009,4.60e-08,23;UBERON:0007023,2.70e-07,51 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0,2.18243053485457,3.03696432774183,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.02051948181284,0,0,1.59992422793407,0.45881856213434,0,0.430761996159075,0.861884930743556,2.66032787238923,0.504060259519861,1.33038306393183,0,0,0,1.73310971850765,0.997407872150954,1.63335485009895,1.25559489221072,0,3.66466620781659,1.76469446409304,2.04913645487534,2.42755176515577,0,0,0,2.34717403304412,0.436050312760893,0.219686182734472,0.194429899074283,2.51975558925653,0,0,0,0,0,0.573066879877513,1.03134418455488,0,0,0,0.338844532069132,1.77858959222228,0.899899717281399,1.97773272513395,0,0.299600110518405,1.15265491596466,0,0,0,2.28520787523043,1.76694832761291,0.122490799214954,0.0958454710182364,0,2.20231761998777,1.14918604276669,2.61131106535614,0.395658863190582,0.274462930807229,0,0.558365998002762,3.37657566019008,2.13917546887534,1.17851434189467,2.13557521198654,0.186399445825301,0.605809546665472,1.43585964202892,0.869593466105033,0,0,0,0,0,1.40444420131752,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.91347103775248,0,1.48442139064825,2.08182392119363,0.608930956624282,0.922461989024234,1.50722640552623,0.470354828542819,0.879666139307728,0.741584903203122,1.59059292611903,0,0,0.662524555381181,0.969750506270444,3.72783522436244,1.17112318804619,0.628340120440365,2.55457055208591,0,0,0,2.09706895166752,0.457500602818626,0.125654352112864,0.869121600961382,0.511430914660661,1.0389402227978,0.973447578406546,0.407357455401265,0.622034853050465,0,1.47309299120532,0.130120442962704,0,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0,0.776110112217047,0,0,0.351902248327898,0.43839146485515,0.556094498451196,1.39300866608867,1.23469281844766,0.199034266818493,0,0,0,0.828503090142008,0.703578179943289,1.08037236876609,2.13070262026689,2.55793501271625,2.77680803197281,5.8133486187602,4.29237442239391,1.75148013550754,2.96207729844265,6.7308660272429,5.83695428730161,8.33339928324394,5.26920276698522,6.84452735677896,0.630869845692382,0,0.991256348951394,0.528901133327089,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,1.14135375667535,2.84717436926707,0.658795818896044,1.75934646160189,0.397912944082302,1.9496408711912,0.898819408654221,1.51296634912286,0.597423819763102,0.569003702859245,0.913988100877831,1.1270773567308,0.610953983535943,1.93952487167626,0.771494018793504,1.58091342810643,5.16635517928608,3.45397201251025,1.72756029490521,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0.358794827043824,0,1.10851914099963,0,0.325929952884052,0,0.469380496577004,0.837531287209079,0.476087281772027,0,0.315270288212382,0,0.478364305972461,0.491589944147214,0.518054945597687,0.723245292907558,0,0,0,0.827810238914197,3.69266356971921,0.820481806145422,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,1.41940085208269,0.178065603667255,0.162886959353576,1.81467135269789,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0,0,0,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0,0.214337035031592,1.06404140185364,0.356737635204141,0.658196082408484,0,3.75474732901937,1.69465656691056,0.220528398054962,2.14352128823924,0.484393280087717,1.20625849856312,1.79058516004705,1.14898629821543,1.1659233465194,2.59595422814714,0,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0.139951452323658,0,2.86401185404534,0,0.609958401380546,0.432021363287205,0.836353184057875,1.09181281873089,0.269728692769641,0.578574190077352,1.30877970992015,1.8146096260851,0,0,0,0,0.194451188344048,0.516639293910924,0.337912250981556,0,0.2604087696879,0,0.241584120826006,0,0,1.41907650703115,0.616265742988964,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.228620419965,0.302478555410522,0.194915761479505,0,0.116876902181569,1.13365191807606,0.221985953374065,0,0,1.15913756419314,3.56596703357246,2.74727436400898,2.14368379079066,4.01257683228291,0,0,0.572895513439397,0.171853182343688,1.37016503954128,0,0,0,0,1.03552062350364,0.103787347584177,0,0,0.486213434136588,0,0.551530525350042,0.222246727801615,0.206035057238894,1.28367683836726,0.758091635291392,0.50695859978048,0,0.280924522409647,0.576226371643824,0.689225627467359,0.476293691283074,0.695305955669133,0.192909220463705,1.23625770240992,0.588795680537589,1.02860775715625,0,0.476872379894642,0.581385666529314,0.564656282491984,0.423073039458382,0.182927972872773,0,1.22223702461276,0,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0,0.382576664137687,0,0.927471342481686 | |||
|short_description=p5@Ampd3 | |||
}} |
Revision as of 11:28, 14 September 2013
Short description: | p5@Ampd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ampd3_5end |
Coexpression cluster: | NA |
Association with transcript: | -105bp_to_ENSMUST00000170374, uc009jfl.1_5end |
EntrezGene: | Ampd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 8.99e-13 | 43 |
primary circulatory organ | 3.78e-10 | 18 |
heart | 3.78e-10 | 18 |
primitive heart tube | 3.78e-10 | 18 |
primary heart field | 3.78e-10 | 18 |
anterior lateral plate mesoderm | 3.78e-10 | 18 |
heart tube | 3.78e-10 | 18 |
heart primordium | 3.78e-10 | 18 |
cardiac mesoderm | 3.78e-10 | 18 |
cardiogenic plate | 3.78e-10 | 18 |
heart rudiment | 3.78e-10 | 18 |
cardiovascular system | 4.60e-08 | 23 |
circulatory system | 4.60e-08 | 23 |
adult organism | 2.70e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.