FFCP PHASE1:Mm9::chr7:125743750..125743778,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74424|HGNC=|MCL_coexpression_id=12|UniProt=Q32NZ6|association_with_transcript=66bp_to_ENSMUST00000121744_5end|description=CAGE_peak_1_at_Tmc5_5end|id=chr7:125743750..125743778,+|ontology_enrichment_celltype=CL:0002563!8.09e-08!9;CL:0002251!8.09e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.51e-09,9;CL:0002251,2.51e-09,9;CL:0002076,2.78e-08,15;CL:0000239,1.62e-07,6;CL:0000677,1.62e-07,6;CL:0000584,1.62e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.79e-19!43;UBERON:0005409!1.78e-18!59;UBERON:0004119!1.12e-14!130;UBERON:0000925!1.12e-14!130;UBERON:0006595!1.12e-14!130;UBERON:0001007!1.49e-14!128;UBERON:0001555!1.49e-14!128;UBERON:0007026!1.49e-14!128;UBERON:0004921!2.11e-13!126;UBERON:0004185!2.11e-13!126;UBERON:0000344!1.19e-12!15;UBERON:0001242!3.60e-11!13;UBERON:0000060!3.60e-11!13;UBERON:0001262!3.60e-11!13;UBERON:0004786!3.60e-11!13;UBERON:0003350!8.09e-08!9;UBERON:0004808!8.09e-08!9;UBERON:0001277!8.09e-08!9;UBERON:0004923!3.08e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.94e-25,31;UBERON:0005409,4.07e-23,47;UBERON:0000344,2.56e-15,15;UBERON:0001242,1.77e-13,13;UBERON:0001262,1.77e-13,13;UBERON:0004786,1.77e-13,13;UBERON:0004119,3.57e-13,118;UBERON:0000925,3.57e-13,118;UBERON:0006595,3.57e-13,118;UBERON:0001007,5.86e-13,116;UBERON:0001555,5.86e-13,116;UBERON:0007026,5.86e-13,116;UBERON:0004921,9.98e-12,114;UBERON:0004923,1.50e-09,24;UBERON:0003350,2.51e-09,9;UBERON:0004808,2.51e-09,9;UBERON:0001277,2.51e-09,9;UBERON:0000485,4.07e-07,11|phase1_expression=0,137.496310609908,147.41975356221,203.558414209497,170.805443911704,28.875234768845,37.3780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,45.9178253417077,52.7641346454491,99.3421297918985,95.1984011511555,73.6911615785741,167.410632541065,60.2352010126234,91.1312398793302,0,0,0,5.48818077527422,5.65197794218874,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,5.19644354487482,0,0,0,0,0,0,0,7.14420435337007,8.36087556067825,7.58286667522175,19.7538111913974,0,0,0,0,0,0,0.117588707135705,0.125666591329675,1.23597483867187,0,0,0,0,0,35.4144346314432,0,0,81.4908006115406,0,0,0,0,0,0,0,0,0,0,1.2220723662038,2.36373244159177,24.0086620511991,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,239.553617663254,110.011435732034,0,0,1.15980715189884,6.45387278794696,15.1217069814512,18.6421113590308,45.5547899082731,47.7626968699632,39.208292572842,46.7547709296704,47.3762731699462,67.4114556490666,58.3572734661674,72.0891409180809,0,0,0,0,0,0.0701358198903186,0.632365371242573,1.18088118383682,1.41298855057237,1.1105744752962,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8798169934987,0,0,0,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0.664394068946325,0.956728611944923,1.63863314715738,2.24490476425664,1.44649058581512,0,0,6.88469982226651,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23252494207958,0.178065603667255,0.488660878060728,33.1589947174796,7.96470830039777,0,0,0,0,0.307435147943927,14.9888410037568,0.727067458955011,0.356497378384721,1.26414703174326,21.0837217149998,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,2.96564899209348,0,0,0,0,0,0,63.8343032219373,0,0,0,0,0,0,0,0,0,0,21.9574242143476,0,0.203319467126849,1.18805874903981,1.46361807210128,11.7915784422936,13.4864346384821,9.09188012978695,4.97336289769656,129.226128371917,18.0188400795208,0,0,0,0,0,0,0,0.781226309063701,0,0,1.44015003128933,0.316011120628178,0.405450430580328,2.97861775777999,2.7283372825337,2.14832034800978,1.98681354781265,1.20195449519969,1.03382669022204,2.22126189885925,0.838274873204998,1.10908803650525,0.877120926657772,0.769694733122636,0.233753804363138,25.1670725812885,0,0,0,0,0.375364950902364,0.549454872801795,3.21552568618599,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,2.00022055021454,1.85431551515005,1.60459604795908,1.51618327058278,2.02783439912192,1.32038438970253,1.49826411951812,1.15245274328765,1.14870937911227,1.42888107384922,1.39061191133827,1.54327376370964,1.23625770240992,1.47198920134397,1.71434626192708,0.70990322463735,0.715308569841963,1.30811774969096,2.1645157495526,1.35383372626682,0.548783918618318,1.31534855718921,1.49384525230448,3.92799590160417,1.06771516311757,1.47756723563345,2.04615521584845,0.929621047115796,0.771626443924566,1.24905288968973,2.10538447600868,4.08255002691767,0.191288332068843,0.441182838239031,0|short_description=p1@Tmc5}} | ||
|EntrezGene=74424 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q32NZ6 | |||
|association_with_transcript=66bp_to_ENSMUST00000121744_5end | |||
|description=CAGE_peak_1_at_Tmc5_5end | |||
|id=chr7:125743750..125743778,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.09e-08!9;CL:0002251!8.09e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.51e-09,9;CL:0002251,2.51e-09,9;CL:0002076,2.78e-08,15;CL:0000239,1.62e-07,6;CL:0000677,1.62e-07,6;CL:0000584,1.62e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.79e-19!43;UBERON:0005409!1.78e-18!59;UBERON:0004119!1.12e-14!130;UBERON:0000925!1.12e-14!130;UBERON:0006595!1.12e-14!130;UBERON:0001007!1.49e-14!128;UBERON:0001555!1.49e-14!128;UBERON:0007026!1.49e-14!128;UBERON:0004921!2.11e-13!126;UBERON:0004185!2.11e-13!126;UBERON:0000344!1.19e-12!15;UBERON:0001242!3.60e-11!13;UBERON:0000060!3.60e-11!13;UBERON:0001262!3.60e-11!13;UBERON:0004786!3.60e-11!13;UBERON:0003350!8.09e-08!9;UBERON:0004808!8.09e-08!9;UBERON:0001277!8.09e-08!9;UBERON:0004923!3.08e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.94e-25,31;UBERON:0005409,4.07e-23,47;UBERON:0000344,2.56e-15,15;UBERON:0001242,1.77e-13,13;UBERON:0001262,1.77e-13,13;UBERON:0004786,1.77e-13,13;UBERON:0004119,3.57e-13,118;UBERON:0000925,3.57e-13,118;UBERON:0006595,3.57e-13,118;UBERON:0001007,5.86e-13,116;UBERON:0001555,5.86e-13,116;UBERON:0007026,5.86e-13,116;UBERON:0004921,9.98e-12,114;UBERON:0004923,1.50e-09,24;UBERON:0003350,2.51e-09,9;UBERON:0004808,2.51e-09,9;UBERON:0001277,2.51e-09,9;UBERON:0000485,4.07e-07,11 | |||
|phase1_expression=0,137.496310609908,147.41975356221,203.558414209497,170.805443911704,28.875234768845,37.3780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,45.9178253417077,52.7641346454491,99.3421297918985,95.1984011511555,73.6911615785741,167.410632541065,60.2352010126234,91.1312398793302,0,0,0,5.48818077527422,5.65197794218874,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,5.19644354487482,0,0,0,0,0,0,0,7.14420435337007,8.36087556067825,7.58286667522175,19.7538111913974,0,0,0,0,0,0,0.117588707135705,0.125666591329675,1.23597483867187,0,0,0,0,0,35.4144346314432,0,0,81.4908006115406,0,0,0,0,0,0,0,0,0,0,1.2220723662038,2.36373244159177,24.0086620511991,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,239.553617663254,110.011435732034,0,0,1.15980715189884,6.45387278794696,15.1217069814512,18.6421113590308,45.5547899082731,47.7626968699632,39.208292572842,46.7547709296704,47.3762731699462,67.4114556490666,58.3572734661674,72.0891409180809,0,0,0,0,0,0.0701358198903186,0.632365371242573,1.18088118383682,1.41298855057237,1.1105744752962,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8798169934987,0,0,0,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0.664394068946325,0.956728611944923,1.63863314715738,2.24490476425664,1.44649058581512,0,0,6.88469982226651,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23252494207958,0.178065603667255,0.488660878060728,33.1589947174796,7.96470830039777,0,0,0,0,0.307435147943927,14.9888410037568,0.727067458955011,0.356497378384721,1.26414703174326,21.0837217149998,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,2.96564899209348,0,0,0,0,0,0,63.8343032219373,0,0,0,0,0,0,0,0,0,0,21.9574242143476,0,0.203319467126849,1.18805874903981,1.46361807210128,11.7915784422936,13.4864346384821,9.09188012978695,4.97336289769656,129.226128371917,18.0188400795208,0,0,0,0,0,0,0,0.781226309063701,0,0,1.44015003128933,0.316011120628178,0.405450430580328,2.97861775777999,2.7283372825337,2.14832034800978,1.98681354781265,1.20195449519969,1.03382669022204,2.22126189885925,0.838274873204998,1.10908803650525,0.877120926657772,0.769694733122636,0.233753804363138,25.1670725812885,0,0,0,0,0.375364950902364,0.549454872801795,3.21552568618599,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,2.00022055021454,1.85431551515005,1.60459604795908,1.51618327058278,2.02783439912192,1.32038438970253,1.49826411951812,1.15245274328765,1.14870937911227,1.42888107384922,1.39061191133827,1.54327376370964,1.23625770240992,1.47198920134397,1.71434626192708,0.70990322463735,0.715308569841963,1.30811774969096,2.1645157495526,1.35383372626682,0.548783918618318,1.31534855718921,1.49384525230448,3.92799590160417,1.06771516311757,1.47756723563345,2.04615521584845,0.929621047115796,0.771626443924566,1.24905288968973,2.10538447600868,4.08255002691767,0.191288332068843,0.441182838239031,0 | |||
|short_description=p1@Tmc5 | |||
}} |
Revision as of 11:35, 14 September 2013
Short description: | p1@Tmc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 66bp_to_ENSMUST00000121744_5end |
EntrezGene: | Tmc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.51e-09 | 9 |
epithelial cell of alimentary canal | 2.51e-09 | 9 |
endo-epithelial cell | 2.78e-08 | 15 |
brush border epithelial cell | 1.62e-07 | 6 |
gut absorptive cell | 1.62e-07 | 6 |
enterocyte | 1.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.94e-25 | 31 |
gastrointestinal system | 4.07e-23 | 47 |
mucosa | 2.56e-15 | 15 |
intestinal mucosa | 1.77e-13 | 13 |
wall of intestine | 1.77e-13 | 13 |
gastrointestinal system mucosa | 1.77e-13 | 13 |
endoderm-derived structure | 3.57e-13 | 118 |
endoderm | 3.57e-13 | 118 |
presumptive endoderm | 3.57e-13 | 118 |
digestive system | 5.86e-13 | 116 |
digestive tract | 5.86e-13 | 116 |
primitive gut | 5.86e-13 | 116 |
subdivision of digestive tract | 9.98e-12 | 114 |
organ component layer | 1.50e-09 | 24 |
epithelium of mucosa | 2.51e-09 | 9 |
gastrointestinal system epithelium | 2.51e-09 | 9 |
intestinal epithelium | 2.51e-09 | 9 |
simple columnar epithelium | 4.07e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.