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FFCP PHASE1:Mm9::chr7:137690787..137690864,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67872|HGNC=|MCL_coexpression_id=151|UniProt=G3XA30,E0CY57|association_with_transcript=30bp_to_ENSMUST00000160289,NM_001162855,uc009kad.2_5end|description=CAGE_peak_1_at_Nsmce4a_5end|id=chr7:137690787..137690864,-|ontology_enrichment_celltype=CL:0000988!4.11e-12!32;CL:0002032!4.11e-12!32;CL:0000037!4.11e-12!32;CL:0000566!4.11e-12!32;CL:0000837!4.11e-12!32;CL:0002031!2.86e-08!25;CL:0000050!7.67e-07!9;CL:0000542!8.00e-07!13;CL:0000051!8.00e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,4.11e-12,32;CL:0002032,4.11e-12,32;CL:0000037,4.11e-12,32;CL:0000837,4.11e-12,32;CL:0002031,2.86e-08,25;CL:0000050,7.67e-07,9;CL:0000542,8.00e-07,13;CL:0000051,8.00e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.01e-10!29;UBERON:0002390!1.56e-09!45;UBERON:0003061!1.56e-09!45;UBERON:0002193!3.62e-09!48;UBERON:0002405!3.72e-08!70;UBERON:0002370!4.63e-08!23;UBERON:0000974!4.63e-08!23;UBERON:0004807!4.63e-08!23;UBERON:0005058!4.63e-08!23;UBERON:0003351!4.63e-08!23;UBERON:0009113!4.63e-08!23;UBERON:0003295!4.63e-08!23;UBERON:0009722!4.63e-08!23;UBERON:0005562!4.63e-08!23;UBERON:0007690!4.63e-08!23;UBERON:0005057!8.00e-08!51;UBERON:0003408!1.05e-07!24;UBERON:0001048!2.21e-07!147;UBERON:0006562!4.11e-07!24;UBERON:0001557!4.11e-07!24;UBERON:0001042!4.11e-07!24;UBERON:0008814!4.11e-07!24;UBERON:0009145!4.11e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.01e-10,29;UBERON:0005057,5.01e-10,29;UBERON:0002390,1.56e-09,45;UBERON:0003061,1.56e-09,45;UBERON:0002193,3.62e-09,48;UBERON:0002405,3.62e-09,48;UBERON:0002370,4.63e-08,23;UBERON:0000974,4.63e-08,23;UBERON:0004807,4.63e-08,23;UBERON:0005058,4.63e-08,23;UBERON:0003351,4.63e-08,23;UBERON:0009113,4.63e-08,23;UBERON:0003295,4.63e-08,23;UBERON:0009722,4.63e-08,23;UBERON:0005562,4.63e-08,23;UBERON:0007690,4.63e-08,23;UBERON:0007811,6.02e-08,36;UBERON:0000153,1.05e-07,43;UBERON:0003408,1.05e-07,24;UBERON:0000077,1.28e-07,35;UBERON:0001048,2.16e-07,134;UBERON:0006562,4.11e-07,24;UBERON:0001557,4.11e-07,24;UBERON:0001042,4.11e-07,24;UBERON:0008814,4.11e-07,24;UBERON:0009145,4.11e-07,24|phase1_expression=69.3444507963758,36.6424178021329,46.8649216571222,56.5608075143772,55.0985302940982,75.5456723603504,69.8501795380622,124.991377091446,92.2166130093417,90.1148426339675,63.6930841798879,75.3846902505929,106.658054747141,106.128368536663,122.91750210998,120.067833562167,144.109746894398,119.086967422735,130.670055226269,145.141260914926,38.6096537285857,112.198774857,120.674302582188,45.9178253417077,61.4816873260016,51.1066448062368,60.3066794622705,49.5583835177545,62.1376581622343,70.8204664625405,61.6410819621747,154.94748432415,115.017115278315,95.0890086092632,134.604854804094,143.959202880454,148.635291359005,87.0545791932768,120.325643056665,81.6697040599125,75.8818619560008,82.6485036799719,78.6526771910469,34.8734185792349,39.2328723819521,30.4687608588391,15.6478268869608,36.1921759591541,19.9914426288369,35.1918117324453,41.0160215362312,20.125359011096,146.977562906577,103.726786307622,91.4175133667502,38.0743965333202,44.1261497505685,50.0201929509119,44.7119378499711,46.0222151966669,46.9035238594573,18.9752937958714,24.0109594950008,23.8473425079571,27.6882581518753,18.4724829885986,18.2756067416227,13.4476406862544,62.8359050589375,56.5674881609784,65.4110629802798,41.4193927385515,32.4676755198872,57.9381480286733,63.6413927561089,63.4260962760914,28.6301290598411,28.0912143787413,29.1852413186863,41.9398394982016,35.1312551433253,41.6730696445408,35.7354238721768,38.2678574821542,30.2540530598084,34.1769159149455,28.6167078406197,41.7534758648673,25.4440009599498,40.2040699768099,76.2343605285413,66.2526385275668,67.3171620370673,37.2395202230094,48.7332313085752,69.444167500087,46.0657698032146,41.7554290316241,39.2276866950332,42.0474093667305,63.8020691588363,46.1975318691544,63.7013099266614,135.102673599133,61.699946688196,51.432052691445,59.6518845117444,53.8947912273963,66.0291603300288,43.0482203287992,67.4857921120268,58.7618373142433,48.1986389265162,54.8630411611546,65.4969098745876,53.5339679064418,39.7983898052342,37.7404321560969,81.3841707793884,48.6918218341702,63.1606742796726,77.0951652485003,42.8701050801681,40.6965307846051,46.0782754989601,55.6896380354729,127.722922723311,153.575099134312,124.910033212823,31.4560342750128,27.9075367719362,27.0156857042658,17.2086076990354,20.9686675010871,29.0903262383384,27.9054972476543,70.1673216928679,65.562473511519,54.0826703048064,37.2482084919059,95.1180438057364,105.295163830531,88.5905678642318,77.6129811853933,85.8620619289757,72.8967068420795,80.6771848459265,41.1338359475035,96.3588928409805,75.8315381472955,63.6943069473495,69.7042429119688,61.4484420788571,41.4420078161378,44.4489414641158,84.9876319314966,131.313866027575,125.328430764866,129.294392224995,70.2156368895351,71.0613961742721,74.7257555063212,70.3131864688074,75.9509934544979,64.7921874126989,74.1783283753801,68.6779907583025,70.4095014474032,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|EntrezGene=67872
|HGNC=
|MCL_coexpression_id=151
|UniProt=G3XA30,E0CY57
|association_with_transcript=30bp_to_ENSMUST00000160289,NM_001162855,uc009kad.2_5end
|description=CAGE_peak_1_at_Nsmce4a_5end
|id=chr7:137690787..137690864,-
|ontology_enrichment_celltype=CL:0000988!4.11e-12!32;CL:0002032!4.11e-12!32;CL:0000037!4.11e-12!32;CL:0000566!4.11e-12!32;CL:0000837!4.11e-12!32;CL:0002031!2.86e-08!25;CL:0000050!7.67e-07!9;CL:0000542!8.00e-07!13;CL:0000051!8.00e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000988,4.11e-12,32;CL:0002032,4.11e-12,32;CL:0000037,4.11e-12,32;CL:0000837,4.11e-12,32;CL:0002031,2.86e-08,25;CL:0000050,7.67e-07,9;CL:0000542,8.00e-07,13;CL:0000051,8.00e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.01e-10!29;UBERON:0002390!1.56e-09!45;UBERON:0003061!1.56e-09!45;UBERON:0002193!3.62e-09!48;UBERON:0002405!3.72e-08!70;UBERON:0002370!4.63e-08!23;UBERON:0000974!4.63e-08!23;UBERON:0004807!4.63e-08!23;UBERON:0005058!4.63e-08!23;UBERON:0003351!4.63e-08!23;UBERON:0009113!4.63e-08!23;UBERON:0003295!4.63e-08!23;UBERON:0009722!4.63e-08!23;UBERON:0005562!4.63e-08!23;UBERON:0007690!4.63e-08!23;UBERON:0005057!8.00e-08!51;UBERON:0003408!1.05e-07!24;UBERON:0001048!2.21e-07!147;UBERON:0006562!4.11e-07!24;UBERON:0001557!4.11e-07!24;UBERON:0001042!4.11e-07!24;UBERON:0008814!4.11e-07!24;UBERON:0009145!4.11e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.01e-10,29;UBERON:0005057,5.01e-10,29;UBERON:0002390,1.56e-09,45;UBERON:0003061,1.56e-09,45;UBERON:0002193,3.62e-09,48;UBERON:0002405,3.62e-09,48;UBERON:0002370,4.63e-08,23;UBERON:0000974,4.63e-08,23;UBERON:0004807,4.63e-08,23;UBERON:0005058,4.63e-08,23;UBERON:0003351,4.63e-08,23;UBERON:0009113,4.63e-08,23;UBERON:0003295,4.63e-08,23;UBERON:0009722,4.63e-08,23;UBERON:0005562,4.63e-08,23;UBERON:0007690,4.63e-08,23;UBERON:0007811,6.02e-08,36;UBERON:0000153,1.05e-07,43;UBERON:0003408,1.05e-07,24;UBERON:0000077,1.28e-07,35;UBERON:0001048,2.16e-07,134;UBERON:0006562,4.11e-07,24;UBERON:0001557,4.11e-07,24;UBERON:0001042,4.11e-07,24;UBERON:0008814,4.11e-07,24;UBERON:0009145,4.11e-07,24
|phase1_expression=69.3444507963758,36.6424178021329,46.8649216571222,56.5608075143772,55.0985302940982,75.5456723603504,69.8501795380622,124.991377091446,92.2166130093417,90.1148426339675,63.6930841798879,75.3846902505929,106.658054747141,106.128368536663,122.91750210998,120.067833562167,144.109746894398,119.086967422735,130.670055226269,145.141260914926,38.6096537285857,112.198774857,120.674302582188,45.9178253417077,61.4816873260016,51.1066448062368,60.3066794622705,49.5583835177545,62.1376581622343,70.8204664625405,61.6410819621747,154.94748432415,115.017115278315,95.0890086092632,134.604854804094,143.959202880454,148.635291359005,87.0545791932768,120.325643056665,81.6697040599125,75.8818619560008,82.6485036799719,78.6526771910469,34.8734185792349,39.2328723819521,30.4687608588391,15.6478268869608,36.1921759591541,19.9914426288369,35.1918117324453,41.0160215362312,20.125359011096,146.977562906577,103.726786307622,91.4175133667502,38.0743965333202,44.1261497505685,50.0201929509119,44.7119378499711,46.0222151966669,46.9035238594573,18.9752937958714,24.0109594950008,23.8473425079571,27.6882581518753,18.4724829885986,18.2756067416227,13.4476406862544,62.8359050589375,56.5674881609784,65.4110629802798,41.4193927385515,32.4676755198872,57.9381480286733,63.6413927561089,63.4260962760914,28.6301290598411,28.0912143787413,29.1852413186863,41.9398394982016,35.1312551433253,41.6730696445408,35.7354238721768,38.2678574821542,30.2540530598084,34.1769159149455,28.6167078406197,41.7534758648673,25.4440009599498,40.2040699768099,76.2343605285413,66.2526385275668,67.3171620370673,37.2395202230094,48.7332313085752,69.444167500087,46.0657698032146,41.7554290316241,39.2276866950332,42.0474093667305,63.8020691588363,46.1975318691544,63.7013099266614,135.102673599133,61.699946688196,51.432052691445,59.6518845117444,53.8947912273963,66.0291603300288,43.0482203287992,67.4857921120268,58.7618373142433,48.1986389265162,54.8630411611546,65.4969098745876,53.5339679064418,39.7983898052342,37.7404321560969,81.3841707793884,48.6918218341702,63.1606742796726,77.0951652485003,42.8701050801681,40.6965307846051,46.0782754989601,55.6896380354729,127.722922723311,153.575099134312,124.910033212823,31.4560342750128,27.9075367719362,27.0156857042658,17.2086076990354,20.9686675010871,29.0903262383384,27.9054972476543,70.1673216928679,65.562473511519,54.0826703048064,37.2482084919059,95.1180438057364,105.295163830531,88.5905678642318,77.6129811853933,85.8620619289757,72.8967068420795,80.6771848459265,41.1338359475035,96.3588928409805,75.8315381472955,63.6943069473495,69.7042429119688,61.4484420788571,41.4420078161378,44.4489414641158,84.9876319314966,131.313866027575,125.328430764866,129.294392224995,70.2156368895351,71.0613961742721,74.7257555063212,70.3131864688074,75.9509934544979,64.7921874126989,74.1783283753801,68.6779907583025,70.4095014474032,62.0390634173821,49.7427416159659,44.7499828693124,42.8365963156224,40.3972212135533,47.5090722411716,22.0804445992334,35.090472821336,40.971929089991,46.0143985994567,78.4900761969661,79.6571784481304,61.9852488959269,52.2360328774457,49.5903037774061,52.8827240592914,54.0963130160743,57.6446341534038,63.3364726176679,57.8963333639749,57.7093697872596,43.1433316154026,52.0892700198013,54.1664263251879,97.489301089884,86.4861240455647,80.0224923278871,80.0349718432085,61.676890919305,64.1041393797512,62.2247525302692,44.8734849857991,51.4955827319709,59.7242273381515,50.9898518589896,79.2514252151447,83.3410139279981,78.9266014470837,84.1869503762287,76.935513961021,72.8229936094861,59.265404314867,61.4492509477384,50.2447386134189,58.9449646762154,41.3076451912039,48.6778770058715,47.484829054057,40.0056232153864,45.8321345295199,62.631331466479,104.409767885537,73.1712744224696,81.4776411720903,70.1723842382621,57.4546463025428,48.0848154589748,55.4179559916149,50.4432461139811,54.9232430328962,46.5607924479862,58.9907932976657,50.2513297229756,64.8027782445172,64.8402520938871,39.1612092349471,26.0635064700089,42.7701956772335,32.1101179975584,29.3029216480508,49.3444185583793,37.3656972262472,63.1016438832513,73.0120451834714,76.6907295928764,70.4957953960028,53.2488831056922,54.6337704422447,71.6514941964563,62.2504977351094,55.3402889125133,31.8108103257589,51.808131101018,52.5293530818403,67.1094272536733,43.7170825877219,30.5313818181915,92.256641738893,81.325036823518,54.1296578899428,44.5905858249967,47.9598830792527,59.9553640150273,71.2526109775911,65.239020244404,48.6696607221157,51.6551182017494,55.6931933540209,64.0026458817121,95.6124409306257,72.8289389696908,68.8021882451411,64.197164578503,56.0078087270502,60.7185886021826,59.3706650773469,42.2409074514679,69.6927513141968,39.2540548537832,34.1314543588864,53.6061896630406,45.8378229453985,43.8096502491511,36.1109979439135,44.888048840997,30.7806001337446,91.0741794652555,57.7883230297023,81.1152029879337,103.037545981566,103.204141929374,99.7472835180439,105.216648166196,115.739851071665,121.892376895502,36.2774834845743,76.0788064562631,65.2655489477184,71.0675142607452,52.8993388916606,47.1663137691744,48.5511646985355,46.1206282947375,36.6458318777641,51.32752942355,52.8138416123887,45.6591280334194,81.0379679558365,87.6929999422617,67.8634647320726,64.0632724449546,74.6786074669239,90.3650737572306,65.362601191663,54.2122810680925,54.3564271858514,44.0685909574534,90.6951916202872,87.7800182206411,81.7579219032025,95.102042419746,91.482641486083,80.4659486864123,81.131928425979,89.0567848862701,86.5282476055625,88.1712752998348,75.4179864823567,84.8858141243244,80.0482522447541,79.1256627769222,29.0214891027471,93.9000582772294,41.8963710366252,58.2559618783352,45.0131754095004,29.6538311212868,41.2091154601346,31.9408884827808,40.1257683228291,22.0253218620656,18.4130094602871,18.9055519435001,26.1216837162405,27.4033007908257,23.4172108190807,27.0009000092722,27.4695933966774,17.2194115413998,24.8524949640874,123.922093015507,64.243004617566,64.5373029750627,51.7817307355466,83.426038725937,78.8688651250561,58.0063959562216,45.3277125925567,45.8914469716296,55.3406893762716,47.6541083793651,49.9859804673102,48.3190178544593,47.8908139988422,46.4078589161355,45.7241943631751,49.4826071784533,49.9634881000996,54.8074248068398,48.5756436443511,52.801864867354,52.1778870108452,49.8331636989901,57.8478738196668,59.1006909008276,55.9302558163982,56.7076715905595,48.6678966160009,49.4326974398937,54.9919426224584,57.3007137539761,49.2522411877817,54.8369597847384,58.5661259682951,48.9982791892099,35.4731020671883,41.1719630863919,44.4783081879977,50.6914079982435,41.2505953753494,52.8658665214561
|short_description=p1@Nsmce4a
}}

Revision as of 12:02, 14 September 2013

Short description:p1@Nsmce4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nsmce4a_5end
Coexpression cluster:MCL_coexpression_mm9:151
Association with transcript: 30bp_to_ENSMUST00000160289, NM_001162855, uc009kad.2_5end
EntrezGene:Nsmce4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nsmce4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G769.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I646.86
CD326+ enterocyte, pool1.CNhs13542.11848-124I356.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I455.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I775.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I869.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9124.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E792.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F290.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E663.69
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F175.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4106.66
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8106.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1122.92
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3120.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5144.11
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2119.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4130.67
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6145.14
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2112.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9120.67
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D145.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D261.48
GP2+ M cell, pool1.CNhs13228.11845-124H951.11
GP2+ M cell, pool2.CNhs13231.11846-124I160.31
GP2+ M cell, pool3.CNhs13240.11847-124I249.56
Ileum epithelium, pool1.CNhs13199.10252-104B962.14
Ileum epithelium, pool2.CNhs13232.10253-104C170.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C861.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3154.95
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6115.02
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E995.09
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5134.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6143.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7148.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G887.05
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1120.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H381.67
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G975.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H282.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H478.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D834.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D939.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B330.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C236.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.99
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C335.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C441.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2146.98
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9103.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A191.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C138.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E144.13
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C550.02
Mouse Granule cells, donor1.CNhs12131.11713-123C344.71
Mouse Granule cells, donor2.CNhs12357.11731-123E346.02
Mouse Granule cells, donor3.CNhs12108.11636-122C746.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.98
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C723.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E727.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C818.28
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D562.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F556.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D965.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F141.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D257.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F263.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D663.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.94
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D841.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E435.74
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E538.27
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I630.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E141.75
Mouse Schwann, donor1.CNhs12507.11728-123D925.44
Mouse Schwann, donor2.CNhs12573.11746-123F940.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G376.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F766.25
Mouse hepatocyte, donor1.CNhs13078.11714-123C467.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F448.73
Mouse hepatocyte, donor8.CNhs13091.11824-124F669.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A746.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I741.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E339.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.05
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G663.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H146.20
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I863.70
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6135.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G161.70
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G251.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G359.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B653.89
accessory axillary lymph node, adult.CNhs10475.1063-29H966.03
adrenal gland, adult.CNhs10508.49-24D743.05
adrenal gland, embryo E14.CNhs11038.406-44C567.49
adrenal gland, embryo E16.CNhs11004.1254-43D658.76
adrenal gland, embryo E17.CNhs11043.1263-45I148.20
adrenal gland, embryo E18.CNhs11026.1262-18F554.86
adrenal gland, neonate N00.CNhs11191.1311-23C165.50
adrenal gland, neonate N25.CNhs11223.1377-27I353.53
amnion, adult pregnant day17.5.CNhs10488.583-22A839.80
aorta, adult.CNhs10498.46-23H137.74
bone (os femoris), adult.CNhs10483.56-12G281.38
bone (os femoris), neonate N02.CNhs11227.1985-43F548.69
bone (os femoris), neonate N16.CNhs11225.1525-43A663.16
bone (os femoris), neonate N20.CNhs11195.1350-25C377.10
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B240.70
cerebellum, neonate N30.CNhs11135.1395-42I246.08
colon, adult.CNhs10468.36-18H755.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7127.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1153.58
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4124.91
corpora quadrigemina, adult.CNhs10501.16-22A431.46
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F127.02
cortex, adult.CNhs10473.12-14D517.21
cortex, neonate N30.CNhs11107.1392-42F220.97
diencephalon, adult.CNhs10482.20-12F229.09
diencephalon, neonate N30.CNhs11201.1388-42B227.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B170.17
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A265.56
epididymis, adult.CNhs10490.58-23B254.08
eyeball, adult.CNhs10484.31-12G437.25
eyeball, embryo E12.CNhs11016.345-16C695.12
eyeball, embryo E14.CNhs10521.399-16E2105.30
eyeball, embryo E15.CNhs10593.426-16C988.59
eyeball, embryo E17.CNhs11023.1261-18D477.61
eyeball, neonate N00.CNhs11207.633-15C685.86
eyeball, neonate N01.CNhs11140.1532-43E772.90
eyeball, neonate N02.CNhs11205.1551-44G880.68
eyeball, neonate N16.CNhs11188.777-19A241.13
forelimb, embryo E11.CNhs10596.335-25E296.36
forelimb, embryo E12.CNhs10600.359-14H275.83
forelimb, embryo E13.CNhs10589.384-1E263.69
forelimb, embryo E14.CNhs10577.413-26A869.70
forelimb, embryo E15.CNhs11007.437-20E761.45
forelimb, embryo E17.CNhs10598.1517-43C441.44
forelimb, embryo E18.CNhs11008.1520-43B544.45
gonad, embryo E13.CNhs11044.1564-45I684.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8131.31
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2125.33
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5129.29
heart, embryo E11.CNhs10586.331-24E970.22
heart, embryo E12.CNhs11015.353-12F571.06
heart, embryo E13.CNhs11013.376-3I974.73
heart, embryo E14.CNhs10597.403-26D470.31
heart, embryo E15.CNhs11017.431-16C875.95
heart, embryo E16.CNhs11021.457-17C664.79
heart, embryo E17.CNhs11025.479-18E574.18
heart, embryo E18.CNhs11030.1283-20G368.68
heart, neonate N00.CNhs11213.639-21E370.41
heart, neonate N03.CNhs11221.1349-25I262.04
heart, neonate N10.CNhs11118.749-24G149.74
heart, neonate N16.CNhs11209.782-15G144.75
heart, neonate N20.CNhs11127.821-26I642.84
heart, neonate N25.CNhs11196.1351-25D340.40
heart, neonate N30.CNhs11202.1390-42D247.51
hippocampus, adult.CNhs10478.13-16E822.08
hippocampus, neonate N00.CNhs11228.627-43G135.09
intestinal mucosa, adult.CNhs10506.860-29I340.97
intestine, adult.CNhs10496.178-9A346.01
intestine, embryo E12.CNhs11019.1251-16I578.49
intestine, embryo E13.CNhs11010.381-16D579.66
intestine, embryo E15.CNhs10602.976-16D861.99
intestine, embryo E16.CNhs10585.463-22H452.24
intestine, embryo E17.CNhs10582.482-18D349.59
intestine, embryo E18.CNhs10526.1289-20F752.88
intestine, neonate N00.CNhs11126.644-26D154.10
intestine, neonate N01.CNhs11192.1322-23E957.64
intestine, neonate N06.CNhs11102.688-20B863.34
intestine, neonate N07.CNhs11095.720-20F257.90
intestine, neonate N10.CNhs11098.755-23A557.71
intestine, neonate N20.CNhs11187.827-18D143.14
intestine, neonate N25.CNhs11121.1352-25E352.09
intestine, neonate N30.CNhs11131.1384-42G154.17
kidney, embryo E14.CNhs10606.411-4I997.49
kidney, embryo E15.CNhs10997.434-16F886.49
kidney, embryo E16.CNhs10584.464-22A580.02
kidney, embryo E17.CNhs11028.483-18I280.03
kidney, embryo E18.CNhs11001.1288-20C761.68
kidney, neonate N00.CNhs11214.646-21G764.10
kidney, neonate N10.CNhs11206.758-6D562.22
kidney, neonate N20.CNhs11113.832-19I144.87
kidney, neonate N25.CNhs11122.1353-25F351.50
kidney, neonate N30.CNhs11203.1385-42H159.72
liver, adult pregnant day01.CNhs10466.508-5B250.99
liver, embryo E12.CNhs10601.355-15F879.25
liver, embryo E13.CNhs10524.378-3H683.34
liver, embryo E14.CNhs10594.409-16E178.93
liver, embryo E15.CNhs10520.433-16D784.19
liver, embryo E16.CNhs10523.462-17F576.94
liver, embryo E17.CNhs10510.481-18A372.82
liver, embryo E18.CNhs10579.499-43G459.27
liver, neonate N00.CNhs11117.641-24F461.45
liver, neonate N03.CNhs11123.1345-25G250.24
liver, neonate N06.CNhs11101.684-20A858.94
liver, neonate N07.CNhs11103.716-20H241.31
liver, neonate N10.CNhs11115.751-24B948.68
liver, neonate N20.CNhs11220.823-25A347.48
liver, neonate N25.CNhs11198.1368-26H140.01
liver, neonate N30.CNhs11106.1382-42D145.83
lung, adult.CNhs10474.28-22B162.63
lung, embryo E12.CNhs10522.354-16G2104.41
lung, embryo E14.CNhs10604.404-26F873.17
lung, embryo E15.CNhs11020.432-17C581.48
lung, embryo E16.CNhs10998.458-17B670.17
lung, embryo E17.CNhs10605.480-44A657.45
lung, embryo E18.CNhs10583.1287-20I648.08
lung, neonate N00.CNhs11224.640-42C655.42
lung, neonate N06.CNhs11212.683-20E550.44
lung, neonate N07.CNhs11111.715-19A354.92
lung, neonate N10.CNhs11219.750-23E646.56
lung, neonate N20.CNhs11109.822-18A458.99
lung, neonate N25.CNhs11119.1359-25C750.25
lung, neonate N30.CNhs11133.1394-42H264.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A164.84
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A139.16
mammary gland, adult lactating day02.CNhs10480.595-22B626.06
mammary gland, adult pregnant day19.CNhs10476.588-5H242.77
medulla oblongata, adult.CNhs10477.17-12C232.11
medulla oblongata, neonate N30.CNhs11200.1396-42A329.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C749.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C237.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E163.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E273.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E376.69
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D770.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D853.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D954.63
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D471.65
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D562.25
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D655.34
olfactory brain, adult.CNhs10489.18-22I931.81
ovary, adult.CNhs10507.91-2I751.81
ovary, embryo E18.CNhs11040.505-44H752.53
ovary, neonate N00.CNhs11217.1299-22I467.11
oviduct, adult pregnant day01.CNhs10500.988-6G643.72
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F492.26
pancreas, embryo E15.CNhs11042.1556-45F281.33
pancreas, embryo E16.CNhs11003.460-26E554.13
pancreas, embryo E17.CNhs10599.1558-45G344.59
pancreas, embryo E18.CNhs10580.1535-43I747.96
pancreas, neonate N00.CNhs11105.645-26G959.96
pancreas, neonate N01.CNhs11138.1531-43D771.25
pancreas, neonate N02.CNhs11139.1539-43D865.24
pancreas, neonate N16.CNhs11136.787-43B648.67
pancreas, neonate N25.CNhs11094.1555-45E251.66
pancreas, neonate N30.CNhs11182.1548-44H555.69
pituitary gland, adult.CNhs10493.21-1G864.00
pituitary gland, embryo E12.CNhs11018.346-16E695.61
pituitary gland, embryo E13.CNhs11009.370-44C772.83
pituitary gland, embryo E14.CNhs11037.398-44A568.80
pituitary gland, embryo E15.CNhs10592.427-16B964.20
pituitary gland, embryo E16.CNhs11036.449-43F656.01
pituitary gland, embryo E17.CNhs11039.1265-44F560.72
pituitary gland, neonate N00.CNhs11190.1308-22E959.37
placenta, adult pregnant day10.CNhs10472.539-13I742.24
placenta, adult pregnant day17.CNhs10464.577-18G369.69
prostate, adult.CNhs10470.859-1F839.25
skin, adult.CNhs10492.30-1C334.13
skin, neonate N00.CNhs11124.650-25G453.61
skin, neonate N03.CNhs11215.662-22H345.84
skin, neonate N06.CNhs11097.693-20I543.81
skin, neonate N10.CNhs11108.762-6C436.11
small intestine, neonate N16.CNhs11114.790-21I144.89
spinal cord, adult.CNhs10505.24-13C930.78
spleen, adult.CNhs10465.25-2G291.07
spleen, embryo E16.CNhs11035.461-43C157.79
spleen, embryo E18.CNhs11011.1271-21F281.12
spleen, neonate N10.CNhs11116.752-24D1103.04
spleen, neonate N20.CNhs11112.824-19H1103.20
spleen, neonate N25.CNhs11099.1354-25G399.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6105.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9115.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3121.89
stomach, adult.CNhs10503.33-1H636.28
stomach, embryo E12.CNhs10588.356-43E376.08
stomach, embryo E15.CNhs10603.1252-16G865.27
stomach, embryo E16.CNhs11022.459-17D471.07
stomach, embryo E17.CNhs11006.1035-18D552.90
stomach, embryo E18.CNhs10999.1286-20C647.17
stomach, neonate N03.CNhs11193.1340-24B848.55
stomach, neonate N07.CNhs11210.718-18A946.12
stomach, neonate N25.CNhs11104.1355-25E436.65
stomach, neonate N30.CNhs11134.1386-42I151.33
submandibular gland, adult.CNhs10469.59-29C152.81
testis, adult.CNhs10504.57-7G545.66
testis, embryo E13.CNhs11031.389-23F581.04
testis, embryo E15.CNhs11034.443-27C587.69
testis, embryo E16.CNhs11033.470-26G567.86
testis, embryo E17.CNhs11029.486-18I564.06
testis, embryo E18.CNhs11027.503-18G574.68
testis, neonate N00.CNhs11189.1300-22B790.37
testis, neonate N07.CNhs11222.726-26I465.36
testis, neonate N10.CNhs11204.763-44D954.21
testis, neonate N20.CNhs11110.839-18H354.36
testis, neonate N30.CNhs11130.1391-42E244.07
thymus, adult.CNhs10471.38-12B590.70
thymus, embryo E14.CNhs11041.402-44I487.78
thymus, embryo E15.CNhs11005.430-45I281.76
thymus, embryo E16.CNhs11002.456-26C595.10
thymus, embryo E17.CNhs10581.478-18C191.48
thymus, embryo E18.CNhs10595.1273-19G480.47
thymus, neonate N02.CNhs11181.1541-43F881.13
thymus, neonate N03.CNhs11137.2104-43C789.06
thymus, neonate N06.CNhs11197.681-26C486.53
thymus, neonate N07.CNhs11211.713-19D388.17
thymus, neonate N10.CNhs11194.748-24E475.42
thymus, neonate N20.CNhs11186.820-7A284.89
thymus, neonate N25.CNhs11125.1362-25G780.05
thymus, neonate N30.CNhs11132.1393-42G279.13
tongue, adult.CNhs10499.32-1B429.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H393.90
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F741.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G558.26
urinary bladder, adult.CNhs10481.879-12E445.01
uterus, adult pregnant day19.CNhs10497.590-15F529.65
uterus, adult.CNhs10509.92-27E541.21
vagina, adult.CNhs10502.89-27D531.94
vesicular gland, adult.CNhs10491.51-27F840.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A523.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I8123.92
whole body, embryo E12.CNhs10587.857-27C964.24
whole body, embryo E13.CNhs10512.372-23H264.54
whole body, embryo E14.5.CNhs10578.420-27D251.78
whole body, embryo E14.CNhs10519.395-14B183.43
whole body, embryo E16.CNhs10514.453-14F278.87
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G558.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G545.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G545.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G555.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G547.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G549.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G548.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G547.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G546.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G545.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G549.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G549.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G554.81
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G548.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G552.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G552.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G549.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G557.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G559.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G555.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G556.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G548.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G549.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G554.99
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G557.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G549.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G554.84
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G558.57
whole body, embryo E17.5.CNhs10513.490-9F949.00
whole body, embryo E17.CNhs10517.475-3I535.47
whole body, embryo E18.CNhs10516.493-3B341.17
whole body, neonate N00.CNhs10525.657-19C244.48
whole body, neonate N01.CNhs10576.659-23C650.69
whole body, neonate N06.CNhs10515.692-21D141.25
whole body, neonate N10.CNhs10518.761-6B452.87





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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