FFCP PHASE1:Mm9::chr7:148878592..148878602,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=171|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:148878592..148878602,-|id=chr7:148878592..148878602,-|ontology_enrichment_celltype=CL:0000473!2.02e-10!3;CL:0000627!2.02e-10!3;CL:0000682!2.02e-10!3|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-08,6;CL:0000677,3.71e-08,6;CL:0000584,3.71e-08,6;CL:0000075,4.05e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.37e-29!43;UBERON:0005409!1.27e-22!59;UBERON:0000344!6.46e-13!15;UBERON:0001242!1.59e-11!13;UBERON:0000060!1.59e-11!13;UBERON:0001262!1.59e-11!13;UBERON:0004786!1.59e-11!13;UBERON:0000331!3.13e-10!3;UBERON:0002116!3.13e-10!3;UBERON:0001204!3.13e-10!3;UBERON:0001168!3.13e-10!3;UBERON:0001007!3.79e-09!128;UBERON:0001555!3.79e-09!128;UBERON:0007026!3.79e-09!128;UBERON:0004119!6.16e-09!130;UBERON:0000925!6.16e-09!130;UBERON:0006595!6.16e-09!130;UBERON:0004921!2.80e-08!126;UBERON:0004185!2.80e-08!126;UBERON:0001155!2.90e-08!2;UBERON:0000059!2.90e-08!2;UBERON:0004923!1.30e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001155,2.37e-23,2;UBERON:0000059,2.37e-23,2;UBERON:0000160,2.33e-17,31;UBERON:0005409,7.01e-15,47;UBERON:0001153,1.20e-12,1;UBERON:0001045,1.20e-12,1;UBERON:0001242,3.87e-08,13;UBERON:0001262,3.87e-08,13;UBERON:0004786,3.87e-08,13;UBERON:0000344,3.92e-07,15|phase1_expression=0,0.348975407639361,0,0,0,2.51818907867835,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91763712426868,0.57423196411502,0.86152399231815,0.861884930743556,2.28028103347649,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr7:148878592..148878602,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=171 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:148878592..148878602,- | |||
|id=chr7:148878592..148878602,- | |||
|ontology_enrichment_celltype=CL:0000473!2.02e-10!3;CL:0000627!2.02e-10!3;CL:0000682!2.02e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-08,6;CL:0000677,3.71e-08,6;CL:0000584,3.71e-08,6;CL:0000075,4.05e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.37e-29!43;UBERON:0005409!1.27e-22!59;UBERON:0000344!6.46e-13!15;UBERON:0001242!1.59e-11!13;UBERON:0000060!1.59e-11!13;UBERON:0001262!1.59e-11!13;UBERON:0004786!1.59e-11!13;UBERON:0000331!3.13e-10!3;UBERON:0002116!3.13e-10!3;UBERON:0001204!3.13e-10!3;UBERON:0001168!3.13e-10!3;UBERON:0001007!3.79e-09!128;UBERON:0001555!3.79e-09!128;UBERON:0007026!3.79e-09!128;UBERON:0004119!6.16e-09!130;UBERON:0000925!6.16e-09!130;UBERON:0006595!6.16e-09!130;UBERON:0004921!2.80e-08!126;UBERON:0004185!2.80e-08!126;UBERON:0001155!2.90e-08!2;UBERON:0000059!2.90e-08!2;UBERON:0004923!1.30e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,2.37e-23,2;UBERON:0000059,2.37e-23,2;UBERON:0000160,2.33e-17,31;UBERON:0005409,7.01e-15,47;UBERON:0001153,1.20e-12,1;UBERON:0001045,1.20e-12,1;UBERON:0001242,3.87e-08,13;UBERON:0001262,3.87e-08,13;UBERON:0004786,3.87e-08,13;UBERON:0000344,3.92e-07,15 | |||
|phase1_expression=0,0.348975407639361,0,0,0,2.51818907867835,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91763712426868,0.57423196411502,0.86152399231815,0.861884930743556,2.28028103347649,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr7:148878592..148878602,- | |||
}} |
Revision as of 12:20, 14 September 2013
Short description: | p@chr7:148878592..148878602, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148878592..148878602, - |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.71e-08 | 6 |
gut absorptive cell | 3.71e-08 | 6 |
enterocyte | 3.71e-08 | 6 |
columnar/cuboidal epithelial cell | 4.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
colon | 2.37e-23 | 2 |
large intestine | 2.37e-23 | 2 |
intestine | 2.33e-17 | 31 |
gastrointestinal system | 7.01e-15 | 47 |
caecum | 1.20e-12 | 1 |
midgut | 1.20e-12 | 1 |
intestinal mucosa | 3.87e-08 | 13 |
wall of intestine | 3.87e-08 | 13 |
gastrointestinal system mucosa | 3.87e-08 | 13 |
mucosa | 3.92e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.