FFCP PHASE1:Mm9::chr7:149674739..149674755,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16985|HGNC=|MCL_coexpression_id=97|UniProt=|association_with_transcript=-166bp_to_ENSMUST00000126149_5end|description=CAGE_peak_21_at_Lsp1_5end|id=chr7:149674739..149674755,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,6.12e-34,3;CL:0000351,6.12e-34,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,6.12e-34,3;UBERON:0000307,6.12e-34,3;UBERON:0007010,6.12e-34,3;UBERON:0001987,1.09e-22,2;UBERON:0003124,1.09e-22,2;UBERON:0004340,1.09e-22,2;UBERON:0005631,1.73e-15,3;UBERON:0000478,1.73e-15,3;UBERON:0000158,1.73e-15,3;UBERON:0005795,7.16e-12,4;UBERON:0000995,7.16e-12,4;UBERON:0003975,1.09e-09,5|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0,0,0,1.04904482902797,0,0.202475267389826,0,0.788655413395594,1.09691546884591,0,0.0850432901510698,0.496454756004426,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,2.3440060335714,0.523523743973798,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.671130424230945,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0,1.64270195644597,1.27099242518292,0,0,0,0.120625849856312,0,0,0,0,0.512612642393558,0,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0,0.138199973804424,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0.389762468933385,0.179026695667481,0.198681354781265,0.480781798079875,0.443068581523732,0.100966449948148,0.0762068066549998,0.302478555410522,0.292373642219257,0.0962118416403295,0.116876902181569,0,1.33191572024439,6.81825310232015,6.37961542183498,0.386379188064381,0.375364950902364,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p21@Lsp1}} | ||
|EntrezGene=16985 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt= | |||
|association_with_transcript=-166bp_to_ENSMUST00000126149_5end | |||
|description=CAGE_peak_21_at_Lsp1_5end | |||
|id=chr7:149674739..149674755,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.12e-34,3;CL:0000351,6.12e-34,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,6.12e-34,3;UBERON:0000307,6.12e-34,3;UBERON:0007010,6.12e-34,3;UBERON:0001987,1.09e-22,2;UBERON:0003124,1.09e-22,2;UBERON:0004340,1.09e-22,2;UBERON:0005631,1.73e-15,3;UBERON:0000478,1.73e-15,3;UBERON:0000158,1.73e-15,3;UBERON:0005795,7.16e-12,4;UBERON:0000995,7.16e-12,4;UBERON:0003975,1.09e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0,0,0,1.04904482902797,0,0.202475267389826,0,0.788655413395594,1.09691546884591,0,0.0850432901510698,0.496454756004426,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,2.3440060335714,0.523523743973798,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.671130424230945,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0,1.64270195644597,1.27099242518292,0,0,0,0.120625849856312,0,0,0,0,0.512612642393558,0,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0,0.138199973804424,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0.389762468933385,0.179026695667481,0.198681354781265,0.480781798079875,0.443068581523732,0.100966449948148,0.0762068066549998,0.302478555410522,0.292373642219257,0.0962118416403295,0.116876902181569,0,1.33191572024439,6.81825310232015,6.37961542183498,0.386379188064381,0.375364950902364,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p21@Lsp1 | |||
}} |
Revision as of 12:25, 14 September 2013
Short description: | p21@Lsp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Lsp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | -166bp_to_ENSMUST00000126149_5end |
EntrezGene: | Lsp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.12e-34 | 3 |
trophoblast cell | 6.12e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 6.12e-34 | 3 |
blastula | 6.12e-34 | 3 |
cleaving embryo | 6.12e-34 | 3 |
placenta | 1.09e-22 | 2 |
chorion | 1.09e-22 | 2 |
allantois | 1.09e-22 | 2 |
extraembryonic membrane | 1.73e-15 | 3 |
extraembryonic structure | 1.73e-15 | 3 |
membranous layer | 1.73e-15 | 3 |
embryonic uterus | 7.16e-12 | 4 |
uterus | 7.16e-12 | 4 |
internal female genitalia | 1.09e-09 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.