FFCP PHASE1:Mm9::chr7:19117743..19117762,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=114868|HGNC=|MCL_coexpression_id=397|UniProt=Q497W1|association_with_transcript=-167bp_to_ENSMUST00000094795,NM_054060,uc009fjm.1_5end|description=CAGE_peak_2_at_Psg25_5end|id=chr7:19117743..19117762,-|ontology_enrichment_celltype=CL:0000473!7.86e-23!3;CL:0000627!7.86e-23!3;CL:0000682!7.86e-23!3;CL:0000239!6.62e-20!6;CL:0000677!6.62e-20!6;CL:0000212!6.62e-20!6;CL:0000584!6.62e-20!6;CL:0000075!4.06e-17!7;CL:0000066!4.68e-14!25;CL:0002563!2.16e-13!9;CL:0002251!2.16e-13!9;CL:0002076!3.82e-08!15|ontology_enrichment_celltype_v019_2=CL:0000682,6.99e-27,3;CL:0000239,1.64e-23,6;CL:0000677,1.64e-23,6;CL:0000584,1.64e-23,6;CL:0000075,3.18e-20,7;CL:0000066,7.27e-17,25;CL:0002563,7.89e-16,9;CL:0002251,7.89e-16,9;CL:0000473,6.24e-12,7;CL:0002076,1.21e-09,15;CL:0000223,2.63e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.92e-24!15;UBERON:0004923!4.36e-19!24;UBERON:0001962!2.05e-16!2;UBERON:0001961!2.05e-16!2;UBERON:0001744!2.05e-16!2;UBERON:0001242!4.09e-14!13;UBERON:0000060!4.09e-14!13;UBERON:0001262!4.09e-14!13;UBERON:0004786!4.09e-14!13;UBERON:0003350!2.16e-13!9;UBERON:0004808!2.16e-13!9;UBERON:0001277!2.16e-13!9;UBERON:0002465!2.91e-11!3;UBERON:0000485!5.18e-11!11;UBERON:0003199!5.23e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.13e-28,15;UBERON:0001962,3.08e-19,2;UBERON:0001961,3.08e-19,2;UBERON:0001744,3.08e-19,2;UBERON:0004923,1.06e-17,24;UBERON:0001242,9.19e-17,13;UBERON:0001262,9.19e-17,13;UBERON:0004786,9.19e-17,13;UBERON:0003350,7.89e-16,9;UBERON:0004808,7.89e-16,9;UBERON:0001277,7.89e-16,9;UBERON:0002465,3.66e-13,3;UBERON:0000485,5.03e-13,11;UBERON:0003199,2.01e-10,1;UBERON:0000160,4.40e-07,31|phase1_expression=0,6.63053274514786,9.09998478779072,0,0,3.52546471014969,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3192271249275,13.0763290208287,5.16808767703518,6.03066794622705,7.32602191132023,0,0,3.10422714917427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Psg25}} | ||
|EntrezGene=114868 | |||
|HGNC= | |||
|MCL_coexpression_id=397 | |||
|UniProt=Q497W1 | |||
|association_with_transcript=-167bp_to_ENSMUST00000094795,NM_054060,uc009fjm.1_5end | |||
|description=CAGE_peak_2_at_Psg25_5end | |||
|id=chr7:19117743..19117762,- | |||
|ontology_enrichment_celltype=CL:0000473!7.86e-23!3;CL:0000627!7.86e-23!3;CL:0000682!7.86e-23!3;CL:0000239!6.62e-20!6;CL:0000677!6.62e-20!6;CL:0000212!6.62e-20!6;CL:0000584!6.62e-20!6;CL:0000075!4.06e-17!7;CL:0000066!4.68e-14!25;CL:0002563!2.16e-13!9;CL:0002251!2.16e-13!9;CL:0002076!3.82e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.99e-27,3;CL:0000239,1.64e-23,6;CL:0000677,1.64e-23,6;CL:0000584,1.64e-23,6;CL:0000075,3.18e-20,7;CL:0000066,7.27e-17,25;CL:0002563,7.89e-16,9;CL:0002251,7.89e-16,9;CL:0000473,6.24e-12,7;CL:0002076,1.21e-09,15;CL:0000223,2.63e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.92e-24!15;UBERON:0004923!4.36e-19!24;UBERON:0001962!2.05e-16!2;UBERON:0001961!2.05e-16!2;UBERON:0001744!2.05e-16!2;UBERON:0001242!4.09e-14!13;UBERON:0000060!4.09e-14!13;UBERON:0001262!4.09e-14!13;UBERON:0004786!4.09e-14!13;UBERON:0003350!2.16e-13!9;UBERON:0004808!2.16e-13!9;UBERON:0001277!2.16e-13!9;UBERON:0002465!2.91e-11!3;UBERON:0000485!5.18e-11!11;UBERON:0003199!5.23e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.13e-28,15;UBERON:0001962,3.08e-19,2;UBERON:0001961,3.08e-19,2;UBERON:0001744,3.08e-19,2;UBERON:0004923,1.06e-17,24;UBERON:0001242,9.19e-17,13;UBERON:0001262,9.19e-17,13;UBERON:0004786,9.19e-17,13;UBERON:0003350,7.89e-16,9;UBERON:0004808,7.89e-16,9;UBERON:0001277,7.89e-16,9;UBERON:0002465,3.66e-13,3;UBERON:0000485,5.03e-13,11;UBERON:0003199,2.01e-10,1;UBERON:0000160,4.40e-07,31 | |||
|phase1_expression=0,6.63053274514786,9.09998478779072,0,0,3.52546471014969,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3192271249275,13.0763290208287,5.16808767703518,6.03066794622705,7.32602191132023,0,0,3.10422714917427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Psg25 | |||
}} |
Revision as of 12:38, 14 September 2013
Short description: | p2@Psg25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Psg25_5end |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | -167bp_to_ENSMUST00000094795, NM_054060, uc009fjm.1_5end |
EntrezGene: | Psg25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.99e-27 | 3 |
brush border epithelial cell | 1.64e-23 | 6 |
gut absorptive cell | 1.64e-23 | 6 |
enterocyte | 1.64e-23 | 6 |
columnar/cuboidal epithelial cell | 3.18e-20 | 7 |
epithelial cell | 7.27e-17 | 25 |
intestinal epithelial cell | 7.89e-16 | 9 |
epithelial cell of alimentary canal | 7.89e-16 | 9 |
defensive cell | 6.24e-12 | 7 |
endo-epithelial cell | 1.21e-09 | 15 |
endodermal cell | 2.63e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.13e-28 | 15 |
gut-associated lymphoid tissue | 3.08e-19 | 2 |
mucosa-associated lymphoid tissue | 3.08e-19 | 2 |
lymphoid tissue | 3.08e-19 | 2 |
organ component layer | 1.06e-17 | 24 |
intestinal mucosa | 9.19e-17 | 13 |
wall of intestine | 9.19e-17 | 13 |
gastrointestinal system mucosa | 9.19e-17 | 13 |
epithelium of mucosa | 7.89e-16 | 9 |
gastrointestinal system epithelium | 7.89e-16 | 9 |
intestinal epithelium | 7.89e-16 | 9 |
lymphoid system | 3.66e-13 | 3 |
simple columnar epithelium | 5.03e-13 | 11 |
egg chamber | 2.01e-10 | 1 |
intestine | 4.40e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.