FFCP PHASE1:Mm9::chr7:88092651..88092663,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56529|HGNC=|UniProt=Q9R0P6,D3Z569,D3YWT0|association_with_transcript=2bp_to_ENSMUST00000026818,ENSMUST00000117383,ENSMUST00000119980_5end|description=CAGE_peak_4_at_Sec11a_5end|id=chr7:88092651..88092663,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003929!7.48e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.59e-07,55|phase1_expression=0.80074423552397,0.348975407639361,0.909998478779072,2.11724947914781,0,0.503637815735669,1.40167584357315,2.06597317506522,0.84473233291,0.70219357896598,1.02730780935303,0.797721589953364,2.56801094896809,4.54586092578786,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,1.02051948181284,1.48936426801328,1.30599894569468,0.95995453676044,1.37645568640302,1.14846392823004,0.86152399231815,1.29282739611533,0.570070258369122,1.51218077855958,0.221730510655305,0.635030673459631,0,0,2.02196133825892,1.16364251750945,3.06254034393554,0.837063261473815,0.7813353445238,0,0,1.36609096991689,0.971020706062307,0.881277725829041,0.405507724878058,0.550640256485045,0.782391344348039,0.436050312760893,0.439372365468944,0.194429899074283,0.699932108126813,0,0.671130424230945,0,1.34437519656986,1.54355661621568,0,1.03134418455488,0.809265843438391,0,1.26766280701236,0.338844532069132,0,1.3498495759221,0.988866362566974,0.7104801149461,0.299600110518405,0,0.829516898467821,0.675029691658453,0.420649922702764,0.285650984403804,1.54607978666129,0.734944795289724,0.670918297127655,0,0,0.255374676170375,0.614426133024974,0.791317726381163,1.00636407962651,0.52091337055676,0.837548997004143,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0.559198337475902,0.454357159999104,0.68014404096107,0.869593466105033,2.58127163094416,2.03991400112325,1.61910957491345,1.94932925234301,1.79210754838934,0.280888840263504,0.511290967734173,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,0.865964164044856,1.26679932737549,0,0.79928715803342,1.03575153458869,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,1.05829836422134,0.376999773989026,4.44950941921873,0.722996784599558,0,0.161766849947409,0.883366073841574,0.969750506270444,1.86391761218122,0,0.209446706813455,0.255457055208591,1.31796636956512,1.19980546198682,0.889491589511453,0.149790639404823,0.915001205637253,1.50785222535437,0.521472960576829,1.02286182932132,0.83115217823824,0.486723789203273,0.407357455401265,0.746441823660558,0.252722758433675,0,1.04096354370163,0.689706313300419,0.540186389416048,0.753524089178575,0.680364991513279,0.2562274405697,0.374806898238915,1.29351685369508,1.07783996466421,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.796137067273973,0.702213187313235,1.02939162845886,1.70498099637356,0.828503090142008,0.703578179943289,0.720248245844059,0.473489471170421,1.96764231747404,0.925602677324269,0.697601834251224,0.268273401399619,0.934122738937356,0.822799249567402,0.656669856316381,0.891756905004413,0.730999937126662,0.219550115291051,0.268412837520744,0.630869845692382,0.720332286654991,0.991256348951394,0.793351699990633,0.639864751605702,1.16118335930219,1.41754207454303,0.403367049246685,1.33426826306922,1.14135375667535,0.474529061544512,0.823494773620054,0.251335208800269,0.795825888164603,0.779856348476481,0.898819408654221,0.864552199498777,1.59313018603494,0.379335801906163,0.913988100877831,0,0.407302655690628,0.775809948670503,0.420814919341911,0.316182685621286,0.885660887877613,0.470996183524124,0.246794327843601,1.77871576252289,1.00107063429656,0.589676985339609,0.899448449539415,1.01430060694251,0.482354319504834,0.50925170356284,0.863088412352432,0.972811360650212,0.549122826376163,1.43768206527355,1.86070473834252,0.312037673114561,1.01031551178845,0.538192240565737,0.964887042726734,0,0.947457058852424,0.325929952884052,0.678980343100753,0.234690248288502,0.502518772325447,0.714130922658041,0.780534591431195,0.788175720530955,0.44292937929755,1.11618338060241,0,0.690739927463582,0.723245292907558,1.50791283939272,0,0,1.10374698521893,0.80275294993896,0.468846746368813,0,1.00988370881749,1.26203287766503,0.390438744296638,0.646270193198397,1.43381278771531,0.445597348164788,0.849229592366497,0.809621403349789,0.584511715822624,0,0.642642632843614,1.13552068166615,0.712262414669021,1.14020871547503,1.48473110675282,0,0.728341908464944,1.81394134178851,1.32023555829129,0.590603785761546,0.307435147943927,1.03371317267288,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,1.08036656418786,1.16422815404479,1.07168517515796,1.59606210278046,0.713475270408282,0.822745103010605,0.913394847343798,1.17335854031855,1.48282449604674,0.661585194164886,0.32977250588296,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,0.582961673259701,0.556275906031529,0.3417417615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| ||
|EntrezGene=56529 | |||
|HGNC= | |||
|UniProt=Q9R0P6,D3Z569,D3YWT0 | |||
|association_with_transcript=2bp_to_ENSMUST00000026818,ENSMUST00000117383,ENSMUST00000119980_5end | |||
|description=CAGE_peak_4_at_Sec11a_5end | |||
|id=chr7:88092651..88092663,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!7.48e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.59e-07,55 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0.909998478779072,2.11724947914781,0,0.503637815735669,1.40167584357315,2.06597317506522,0.84473233291,0.70219357896598,1.02730780935303,0.797721589953364,2.56801094896809,4.54586092578786,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,1.02051948181284,1.48936426801328,1.30599894569468,0.95995453676044,1.37645568640302,1.14846392823004,0.86152399231815,1.29282739611533,0.570070258369122,1.51218077855958,0.221730510655305,0.635030673459631,0,0,2.02196133825892,1.16364251750945,3.06254034393554,0.837063261473815,0.7813353445238,0,0,1.36609096991689,0.971020706062307,0.881277725829041,0.405507724878058,0.550640256485045,0.782391344348039,0.436050312760893,0.439372365468944,0.194429899074283,0.699932108126813,0,0.671130424230945,0,1.34437519656986,1.54355661621568,0,1.03134418455488,0.809265843438391,0,1.26766280701236,0.338844532069132,0,1.3498495759221,0.988866362566974,0.7104801149461,0.299600110518405,0,0.829516898467821,0.675029691658453,0.420649922702764,0.285650984403804,1.54607978666129,0.734944795289724,0.670918297127655,0,0,0.255374676170375,0.614426133024974,0.791317726381163,1.00636407962651,0.52091337055676,0.837548997004143,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0.559198337475902,0.454357159999104,0.68014404096107,0.869593466105033,2.58127163094416,2.03991400112325,1.61910957491345,1.94932925234301,1.79210754838934,0.280888840263504,0.511290967734173,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,0.865964164044856,1.26679932737549,0,0.79928715803342,1.03575153458869,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,1.05829836422134,0.376999773989026,4.44950941921873,0.722996784599558,0,0.161766849947409,0.883366073841574,0.969750506270444,1.86391761218122,0,0.209446706813455,0.255457055208591,1.31796636956512,1.19980546198682,0.889491589511453,0.149790639404823,0.915001205637253,1.50785222535437,0.521472960576829,1.02286182932132,0.83115217823824,0.486723789203273,0.407357455401265,0.746441823660558,0.252722758433675,0,1.04096354370163,0.689706313300419,0.540186389416048,0.753524089178575,0.680364991513279,0.2562274405697,0.374806898238915,1.29351685369508,1.07783996466421,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.796137067273973,0.702213187313235,1.02939162845886,1.70498099637356,0.828503090142008,0.703578179943289,0.720248245844059,0.473489471170421,1.96764231747404,0.925602677324269,0.697601834251224,0.268273401399619,0.934122738937356,0.822799249567402,0.656669856316381,0.891756905004413,0.730999937126662,0.219550115291051,0.268412837520744,0.630869845692382,0.720332286654991,0.991256348951394,0.793351699990633,0.639864751605702,1.16118335930219,1.41754207454303,0.403367049246685,1.33426826306922,1.14135375667535,0.474529061544512,0.823494773620054,0.251335208800269,0.795825888164603,0.779856348476481,0.898819408654221,0.864552199498777,1.59313018603494,0.379335801906163,0.913988100877831,0,0.407302655690628,0.775809948670503,0.420814919341911,0.316182685621286,0.885660887877613,0.470996183524124,0.246794327843601,1.77871576252289,1.00107063429656,0.589676985339609,0.899448449539415,1.01430060694251,0.482354319504834,0.50925170356284,0.863088412352432,0.972811360650212,0.549122826376163,1.43768206527355,1.86070473834252,0.312037673114561,1.01031551178845,0.538192240565737,0.964887042726734,0,0.947457058852424,0.325929952884052,0.678980343100753,0.234690248288502,0.502518772325447,0.714130922658041,0.780534591431195,0.788175720530955,0.44292937929755,1.11618338060241,0,0.690739927463582,0.723245292907558,1.50791283939272,0,0,1.10374698521893,0.80275294993896,0.468846746368813,0,1.00988370881749,1.26203287766503,0.390438744296638,0.646270193198397,1.43381278771531,0.445597348164788,0.849229592366497,0.809621403349789,0.584511715822624,0,0.642642632843614,1.13552068166615,0.712262414669021,1.14020871547503,1.48473110675282,0,0.728341908464944,1.81394134178851,1.32023555829129,0.590603785761546,0.307435147943927,1.03371317267288,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,1.08036656418786,1.16422815404479,1.07168517515796,1.59606210278046,0.713475270408282,0.822745103010605,0.913394847343798,1.17335854031855,1.48282449604674,0.661585194164886,0.32977250588296,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,0.582961673259701,0.556275906031529,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0.136694227721025,0.686334519619568,0.849892149969277,0.979660166265606,1.10559979043539,0,1.10717597753397,0.609958401380546,0.216010681643603,0,0.436725127492355,0.539457385539283,0.909188012978695,1.57053565190418,1.16653475962614,1.86401793926078,2.25477175473676,1.04661582230785,0.330916980914195,0.777804753376191,0.387479470433193,1.01373675294467,0.234714477291508,0.651021924219751,1.36317147753424,1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| |||
|short_description=p4@Sec11a | |||
}} | |||
Revision as of 14:20, 14 September 2013
| Short description: | p4@Sec11a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Sec11a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 2bp_to_ENSMUST00000026818, ENSMUST00000117383, ENSMUST00000119980_5end |
| EntrezGene: | Sec11a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gut epithelium | 1.59e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
