FFCP PHASE1:Mm9::chr9:46049601..46049682,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46049601..46049682,-|id=chr9:46049601..46049682,-|ontology_enrichment_celltype=CL:0000239!1.76e-08!6;CL:0000677!1.76e-08!6;CL:0000212!1.76e-08!6;CL:0000584!1.76e-08!6;CL:0000075!4.47e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,8.75e-14,6;CL:0000677,8.75e-14,6;CL:0000584,8.75e-14,6;CL:0000075,1.06e-11,7;CL:0000066,4.74e-09,25;CL:0002563,6.44e-09,9;CL:0002251,6.44e-09,9;CL:0000682,6.91e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.31e-14!43;UBERON:0005409!8.92e-13!59;UBERON:0000344!3.31e-11!15;UBERON:0004923!5.50e-09!24;UBERON:0001242!7.29e-09!13;UBERON:0000060!7.29e-09!13;UBERON:0001262!7.29e-09!13;UBERON:0004786!7.29e-09!13;UBERON:0004119!2.81e-08!130;UBERON:0000925!2.81e-08!130;UBERON:0006595!2.81e-08!130;UBERON:0001007!1.76e-07!128;UBERON:0001555!1.76e-07!128;UBERON:0007026!1.76e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.19e-37,31;UBERON:0005409,2.07e-24,47;UBERON:0000344,1.16e-19,15;UBERON:0001242,1.86e-15,13;UBERON:0001262,1.86e-15,13;UBERON:0004786,1.86e-15,13;UBERON:0004923,2.79e-13,24;UBERON:0001007,1.05e-12,116;UBERON:0001555,1.05e-12,116;UBERON:0007026,1.05e-12,116;UBERON:0004119,2.31e-12,118;UBERON:0000925,2.31e-12,118;UBERON:0006595,2.31e-12,118;UBERON:0004921,9.94e-11,114;UBERON:0003350,6.44e-09,9;UBERON:0004808,6.44e-09,9;UBERON:0001277,6.44e-09,9;UBERON:0002108,2.02e-08,4;UBERON:0000485,3.78e-07,11|phase1_expression=0,65.9563520438392,118.299802241279,19.0552453123303,36.064492556137,8.89760141133016,15.4184342793047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.1178632277407,99.793037264219,52.8293406985819,30.1533397311352,33.3980410663128,1.33016393619462,1.51218077855958,7.31710685162506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4390540123558,3.2382191498269,0,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0,0,0,0,0,0,0,12.6069433544531,0,0,0,0,0,0,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,34.6939722132988,34.9074747995878,0,0,0.128867461322093,1.4117846723634,4.22518283305254,20.1639163679313,37.0132668004719,84.4905637734176,67.106500749672,32.0319919986253,45.0367041245168,11.6846523125049,26.5849801345874,20.3124098719455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,2.74561413188081,2.87536413054709,1.11642284300551,0,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,13.1798429515793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0,26.5247561333164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,3.49380101993884,0.539457385539283,0.495920734352016,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.758091635291392,0,0.377252682772152,0.749132059759059,0.256100609619477,0.34461281373368,0,0.927074607558844,0.77163688185482,0.412085900803307,1.03039244094078,1.71434626192708,0.70990322463735,0.476872379894642,1.16277133305863,0.470546902076653,0.676916863133412,0.914639864363863,0.263069711437843,0.814824683075171,0.561142271657738,0.355905054372522,0.689531376628944,0,0.154936841185966,0.192906610981141,0,0.701794825336225,1.07435527024149,0,0,0|short_description=p@chr9:46049601..46049682,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:46049601..46049682,- | |||
|id=chr9:46049601..46049682,- | |||
|ontology_enrichment_celltype=CL:0000239!1.76e-08!6;CL:0000677!1.76e-08!6;CL:0000212!1.76e-08!6;CL:0000584!1.76e-08!6;CL:0000075!4.47e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.75e-14,6;CL:0000677,8.75e-14,6;CL:0000584,8.75e-14,6;CL:0000075,1.06e-11,7;CL:0000066,4.74e-09,25;CL:0002563,6.44e-09,9;CL:0002251,6.44e-09,9;CL:0000682,6.91e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.31e-14!43;UBERON:0005409!8.92e-13!59;UBERON:0000344!3.31e-11!15;UBERON:0004923!5.50e-09!24;UBERON:0001242!7.29e-09!13;UBERON:0000060!7.29e-09!13;UBERON:0001262!7.29e-09!13;UBERON:0004786!7.29e-09!13;UBERON:0004119!2.81e-08!130;UBERON:0000925!2.81e-08!130;UBERON:0006595!2.81e-08!130;UBERON:0001007!1.76e-07!128;UBERON:0001555!1.76e-07!128;UBERON:0007026!1.76e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.19e-37,31;UBERON:0005409,2.07e-24,47;UBERON:0000344,1.16e-19,15;UBERON:0001242,1.86e-15,13;UBERON:0001262,1.86e-15,13;UBERON:0004786,1.86e-15,13;UBERON:0004923,2.79e-13,24;UBERON:0001007,1.05e-12,116;UBERON:0001555,1.05e-12,116;UBERON:0007026,1.05e-12,116;UBERON:0004119,2.31e-12,118;UBERON:0000925,2.31e-12,118;UBERON:0006595,2.31e-12,118;UBERON:0004921,9.94e-11,114;UBERON:0003350,6.44e-09,9;UBERON:0004808,6.44e-09,9;UBERON:0001277,6.44e-09,9;UBERON:0002108,2.02e-08,4;UBERON:0000485,3.78e-07,11 | |||
|phase1_expression=0,65.9563520438392,118.299802241279,19.0552453123303,36.064492556137,8.89760141133016,15.4184342793047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.1178632277407,99.793037264219,52.8293406985819,30.1533397311352,33.3980410663128,1.33016393619462,1.51218077855958,7.31710685162506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4390540123558,3.2382191498269,0,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0,0,0,0,0,0,0,12.6069433544531,0,0,0,0,0,0,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,34.6939722132988,34.9074747995878,0,0,0.128867461322093,1.4117846723634,4.22518283305254,20.1639163679313,37.0132668004719,84.4905637734176,67.106500749672,32.0319919986253,45.0367041245168,11.6846523125049,26.5849801345874,20.3124098719455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,2.74561413188081,2.87536413054709,1.11642284300551,0,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,13.1798429515793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0,26.5247561333164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,3.49380101993884,0.539457385539283,0.495920734352016,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.758091635291392,0,0.377252682772152,0.749132059759059,0.256100609619477,0.34461281373368,0,0.927074607558844,0.77163688185482,0.412085900803307,1.03039244094078,1.71434626192708,0.70990322463735,0.476872379894642,1.16277133305863,0.470546902076653,0.676916863133412,0.914639864363863,0.263069711437843,0.814824683075171,0.561142271657738,0.355905054372522,0.689531376628944,0,0.154936841185966,0.192906610981141,0,0.701794825336225,1.07435527024149,0,0,0 | |||
|short_description=p@chr9:46049601..46049682,- | |||
}} |
Revision as of 18:04, 14 September 2013
Short description: | p@chr9:46049601..46049682, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46049601..46049682, - |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.75e-14 | 6 |
gut absorptive cell | 8.75e-14 | 6 |
enterocyte | 8.75e-14 | 6 |
columnar/cuboidal epithelial cell | 1.06e-11 | 7 |
epithelial cell | 4.74e-09 | 25 |
intestinal epithelial cell | 6.44e-09 | 9 |
epithelial cell of alimentary canal | 6.44e-09 | 9 |
M cell of gut | 6.91e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.19e-37 | 31 |
gastrointestinal system | 2.07e-24 | 47 |
mucosa | 1.16e-19 | 15 |
intestinal mucosa | 1.86e-15 | 13 |
wall of intestine | 1.86e-15 | 13 |
gastrointestinal system mucosa | 1.86e-15 | 13 |
organ component layer | 2.79e-13 | 24 |
digestive system | 1.05e-12 | 116 |
digestive tract | 1.05e-12 | 116 |
primitive gut | 1.05e-12 | 116 |
endoderm-derived structure | 2.31e-12 | 118 |
endoderm | 2.31e-12 | 118 |
presumptive endoderm | 2.31e-12 | 118 |
subdivision of digestive tract | 9.94e-11 | 114 |
epithelium of mucosa | 6.44e-09 | 9 |
gastrointestinal system epithelium | 6.44e-09 | 9 |
intestinal epithelium | 6.44e-09 | 9 |
small intestine | 2.02e-08 | 4 |
simple columnar epithelium | 3.78e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.