FFCP PHASE1:Mm9::chr9:46051125..46051130,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46051125..46051130,+|id=chr9:46051125..46051130,+|ontology_enrichment_celltype=CL:0000239!1.42e-12!6;CL:0000677!1.42e-12!6;CL:0000212!1.42e-12!6;CL:0000584!1.42e-12!6;CL:0000075!1.21e-10!7;CL:0002563!4.55e-08!9;CL:0002251!4.55e-08!9;CL:0000473!1.68e-07!3;CL:0000627!1.68e-07!3;CL:0000682!1.68e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,8.70e-19,6;CL:0000677,8.70e-19,6;CL:0000584,8.70e-19,6;CL:0000075,4.34e-16,7;CL:0000682,7.68e-15,3;CL:0000066,1.28e-13,25;CL:0002563,1.75e-12,9;CL:0002251,1.75e-12,9;CL:0000223,1.09e-07,20;CL:0002076,2.05e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.58e-15!15;UBERON:0000160!3.53e-14!43;UBERON:0001242!1.88e-11!13;UBERON:0000060!1.88e-11!13;UBERON:0001262!1.88e-11!13;UBERON:0004786!1.88e-11!13;UBERON:0005409!5.42e-10!59;UBERON:0004923!5.60e-10!24;UBERON:0003350!4.55e-08!9;UBERON:0004808!4.55e-08!9;UBERON:0001277!4.55e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.06e-22,31;UBERON:0000344,1.58e-18,15;UBERON:0005409,9.01e-14,47;UBERON:0003350,1.75e-12,9;UBERON:0004808,1.75e-12,9;UBERON:0001277,1.75e-12,9;UBERON:0001242,4.50e-12,13;UBERON:0001262,4.50e-12,13;UBERON:0004786,4.50e-12,13;UBERON:0004923,3.38e-11,24;UBERON:0001962,1.63e-10,2;UBERON:0001961,1.63e-10,2;UBERON:0001744,1.63e-10,2;UBERON:0000485,3.49e-10,11;UBERON:0001007,2.10e-08,116;UBERON:0001555,2.10e-08,116;UBERON:0007026,2.10e-08,116;UBERON:0004119,3.25e-08,118;UBERON:0000925,3.25e-08,118;UBERON:0006595,3.25e-08,118;UBERON:0002465,2.81e-07,3|phase1_expression=0,4.53668029931169,8.64498554840118,1.81478526784098,3.50627010962443,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,6.19405058881359,8.6134794617253,6.03066794622705,3.23206849028834,0,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.719885334831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,3.17340679996253,0,0,0,0,0.444756087689741,0.760902504450237,0.949058123089023,2.14108641141214,2.76468729680296,1.79060824837036,1.75467678407208,0,1.94524244887225,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p@chr9:46051125..46051130,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:46051125..46051130,+ | |||
|id=chr9:46051125..46051130,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.42e-12!6;CL:0000677!1.42e-12!6;CL:0000212!1.42e-12!6;CL:0000584!1.42e-12!6;CL:0000075!1.21e-10!7;CL:0002563!4.55e-08!9;CL:0002251!4.55e-08!9;CL:0000473!1.68e-07!3;CL:0000627!1.68e-07!3;CL:0000682!1.68e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.70e-19,6;CL:0000677,8.70e-19,6;CL:0000584,8.70e-19,6;CL:0000075,4.34e-16,7;CL:0000682,7.68e-15,3;CL:0000066,1.28e-13,25;CL:0002563,1.75e-12,9;CL:0002251,1.75e-12,9;CL:0000223,1.09e-07,20;CL:0002076,2.05e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.58e-15!15;UBERON:0000160!3.53e-14!43;UBERON:0001242!1.88e-11!13;UBERON:0000060!1.88e-11!13;UBERON:0001262!1.88e-11!13;UBERON:0004786!1.88e-11!13;UBERON:0005409!5.42e-10!59;UBERON:0004923!5.60e-10!24;UBERON:0003350!4.55e-08!9;UBERON:0004808!4.55e-08!9;UBERON:0001277!4.55e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.06e-22,31;UBERON:0000344,1.58e-18,15;UBERON:0005409,9.01e-14,47;UBERON:0003350,1.75e-12,9;UBERON:0004808,1.75e-12,9;UBERON:0001277,1.75e-12,9;UBERON:0001242,4.50e-12,13;UBERON:0001262,4.50e-12,13;UBERON:0004786,4.50e-12,13;UBERON:0004923,3.38e-11,24;UBERON:0001962,1.63e-10,2;UBERON:0001961,1.63e-10,2;UBERON:0001744,1.63e-10,2;UBERON:0000485,3.49e-10,11;UBERON:0001007,2.10e-08,116;UBERON:0001555,2.10e-08,116;UBERON:0007026,2.10e-08,116;UBERON:0004119,3.25e-08,118;UBERON:0000925,3.25e-08,118;UBERON:0006595,3.25e-08,118;UBERON:0002465,2.81e-07,3 | |||
|phase1_expression=0,4.53668029931169,8.64498554840118,1.81478526784098,3.50627010962443,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,6.19405058881359,8.6134794617253,6.03066794622705,3.23206849028834,0,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.719885334831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,3.17340679996253,0,0,0,0,0.444756087689741,0.760902504450237,0.949058123089023,2.14108641141214,2.76468729680296,1.79060824837036,1.75467678407208,0,1.94524244887225,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr9:46051125..46051130,+ | |||
}} |
Revision as of 18:04, 14 September 2013
Short description: | p@chr9:46051125..46051130, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46051125..46051130, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.70e-19 | 6 |
gut absorptive cell | 8.70e-19 | 6 |
enterocyte | 8.70e-19 | 6 |
columnar/cuboidal epithelial cell | 4.34e-16 | 7 |
M cell of gut | 7.68e-15 | 3 |
epithelial cell | 1.28e-13 | 25 |
intestinal epithelial cell | 1.75e-12 | 9 |
epithelial cell of alimentary canal | 1.75e-12 | 9 |
endodermal cell | 1.09e-07 | 20 |
endo-epithelial cell | 2.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.06e-22 | 31 |
mucosa | 1.58e-18 | 15 |
gastrointestinal system | 9.01e-14 | 47 |
epithelium of mucosa | 1.75e-12 | 9 |
gastrointestinal system epithelium | 1.75e-12 | 9 |
intestinal epithelium | 1.75e-12 | 9 |
intestinal mucosa | 4.50e-12 | 13 |
wall of intestine | 4.50e-12 | 13 |
gastrointestinal system mucosa | 4.50e-12 | 13 |
organ component layer | 3.38e-11 | 24 |
gut-associated lymphoid tissue | 1.63e-10 | 2 |
mucosa-associated lymphoid tissue | 1.63e-10 | 2 |
lymphoid tissue | 1.63e-10 | 2 |
simple columnar epithelium | 3.49e-10 | 11 |
digestive system | 2.10e-08 | 116 |
digestive tract | 2.10e-08 | 116 |
primitive gut | 2.10e-08 | 116 |
endoderm-derived structure | 3.25e-08 | 118 |
endoderm | 3.25e-08 | 118 |
presumptive endoderm | 3.25e-08 | 118 |
lymphoid system | 2.81e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.