FFCP PHASE1:Mm9::chr9:65270587..65270598,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330962|HGNC=|UniProt=Q80WK2|association_with_transcript=-7bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end|description=CAGE_peak_9_at_Ostb_5end|id=chr9:65270587..65270598,-|ontology_enrichment_celltype=CL:0000239!2.53e-09!6;CL:0000677!2.53e-09!6;CL:0000212!2.53e-09!6;CL:0000584!2.53e-09!6;CL:0000075!7.70e-08!7|ontology_enrichment_celltype_v019_2=CL:0000682,8.28e-12,3;CL:0000239,1.77e-09,6;CL:0000677,1.77e-09,6;CL:0000584,1.77e-09,6;CL:0000075,3.91e-08,7;CL:0000066,5.69e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.20e-16!43;UBERON:0000344!1.06e-13!15;UBERON:0005409!3.64e-11!59;UBERON:0001242!5.11e-11!13;UBERON:0000060!5.11e-11!13;UBERON:0001262!5.11e-11!13;UBERON:0004786!5.11e-11!13;UBERON:0004923!7.10e-09!24;UBERON:0001007!3.35e-08!128;UBERON:0001555!3.35e-08!128;UBERON:0007026!3.35e-08!128;UBERON:0004119!6.40e-08!130;UBERON:0000925!6.40e-08!130;UBERON:0006595!6.40e-08!130;UBERON:0004921!5.22e-07!126;UBERON:0004185!5.22e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.92e-22,31;UBERON:0000344,5.34e-18,15;UBERON:0002108,6.94e-15,4;UBERON:0005409,8.24e-14,47;UBERON:0004923,2.23e-13,24;UBERON:0001242,8.21e-13,13;UBERON:0001262,8.21e-13,13;UBERON:0004786,8.21e-13,13;UBERON:0000331,5.06e-12,3;UBERON:0002116,5.06e-12,3;UBERON:0001204,5.06e-12,3;UBERON:0001168,5.06e-12,3;UBERON:0001007,3.05e-09,116;UBERON:0001555,3.05e-09,116;UBERON:0007026,3.05e-09,116;UBERON:0004119,5.11e-09,118;UBERON:0000925,5.11e-09,118;UBERON:0006595,5.11e-09,118;UBERON:0001962,5.52e-08,2;UBERON:0001961,5.52e-08,2;UBERON:0001744,5.52e-08,2;UBERON:0004921,2.75e-07,114|phase1_expression=0,15.0059425284925,10.0099832665698,0.60492842261366,1.00179145989269,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.67982572424835,5.73523202667925,13.7815671387605,11.630573896295,8.61884930743556,19.0023419456374,7.56090389279792,39.2463003859889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,2.03991400112325,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,28.6746162571874,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0,0.201683524623343,0.667134131534611,2.85338439168839,0.949058123089023,3.95277491337626,1.00534083520108,0.994782360205754,1.75467678407208,7.19055526923377,1.29682829924817,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0.757736633841335,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0,1.07435527024149,0,0,0|short_description=p9@Ostb}} | ||
|EntrezGene=330962 | |||
|HGNC= | |||
|UniProt=Q80WK2 | |||
|association_with_transcript=-7bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | |||
|description=CAGE_peak_9_at_Ostb_5end | |||
|id=chr9:65270587..65270598,- | |||
|ontology_enrichment_celltype=CL:0000239!2.53e-09!6;CL:0000677!2.53e-09!6;CL:0000212!2.53e-09!6;CL:0000584!2.53e-09!6;CL:0000075!7.70e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.28e-12,3;CL:0000239,1.77e-09,6;CL:0000677,1.77e-09,6;CL:0000584,1.77e-09,6;CL:0000075,3.91e-08,7;CL:0000066,5.69e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.20e-16!43;UBERON:0000344!1.06e-13!15;UBERON:0005409!3.64e-11!59;UBERON:0001242!5.11e-11!13;UBERON:0000060!5.11e-11!13;UBERON:0001262!5.11e-11!13;UBERON:0004786!5.11e-11!13;UBERON:0004923!7.10e-09!24;UBERON:0001007!3.35e-08!128;UBERON:0001555!3.35e-08!128;UBERON:0007026!3.35e-08!128;UBERON:0004119!6.40e-08!130;UBERON:0000925!6.40e-08!130;UBERON:0006595!6.40e-08!130;UBERON:0004921!5.22e-07!126;UBERON:0004185!5.22e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.92e-22,31;UBERON:0000344,5.34e-18,15;UBERON:0002108,6.94e-15,4;UBERON:0005409,8.24e-14,47;UBERON:0004923,2.23e-13,24;UBERON:0001242,8.21e-13,13;UBERON:0001262,8.21e-13,13;UBERON:0004786,8.21e-13,13;UBERON:0000331,5.06e-12,3;UBERON:0002116,5.06e-12,3;UBERON:0001204,5.06e-12,3;UBERON:0001168,5.06e-12,3;UBERON:0001007,3.05e-09,116;UBERON:0001555,3.05e-09,116;UBERON:0007026,3.05e-09,116;UBERON:0004119,5.11e-09,118;UBERON:0000925,5.11e-09,118;UBERON:0006595,5.11e-09,118;UBERON:0001962,5.52e-08,2;UBERON:0001961,5.52e-08,2;UBERON:0001744,5.52e-08,2;UBERON:0004921,2.75e-07,114 | |||
|phase1_expression=0,15.0059425284925,10.0099832665698,0.60492842261366,1.00179145989269,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.67982572424835,5.73523202667925,13.7815671387605,11.630573896295,8.61884930743556,19.0023419456374,7.56090389279792,39.2463003859889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,2.03991400112325,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,28.6746162571874,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0,0.201683524623343,0.667134131534611,2.85338439168839,0.949058123089023,3.95277491337626,1.00534083520108,0.994782360205754,1.75467678407208,7.19055526923377,1.29682829924817,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0.757736633841335,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0,1.07435527024149,0,0,0 | |||
|short_description=p9@Ostb | |||
}} |
Revision as of 18:32, 14 September 2013
Short description: | p9@Ostb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ostb_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENSMUST00000065894, NM_178933, uc009qdg.1_5end |
EntrezGene: | Ostb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.28e-12 | 3 |
brush border epithelial cell | 1.77e-09 | 6 |
gut absorptive cell | 1.77e-09 | 6 |
enterocyte | 1.77e-09 | 6 |
columnar/cuboidal epithelial cell | 3.91e-08 | 7 |
epithelial cell | 5.69e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.92e-22 | 31 |
mucosa | 5.34e-18 | 15 |
small intestine | 6.94e-15 | 4 |
gastrointestinal system | 8.24e-14 | 47 |
organ component layer | 2.23e-13 | 24 |
intestinal mucosa | 8.21e-13 | 13 |
wall of intestine | 8.21e-13 | 13 |
gastrointestinal system mucosa | 8.21e-13 | 13 |
ileal mucosa | 5.06e-12 | 3 |
ileum | 5.06e-12 | 3 |
mucosa of small intestine | 5.06e-12 | 3 |
wall of small intestine | 5.06e-12 | 3 |
digestive system | 3.05e-09 | 116 |
digestive tract | 3.05e-09 | 116 |
primitive gut | 3.05e-09 | 116 |
endoderm-derived structure | 5.11e-09 | 118 |
endoderm | 5.11e-09 | 118 |
presumptive endoderm | 5.11e-09 | 118 |
gut-associated lymphoid tissue | 5.52e-08 | 2 |
mucosa-associated lymphoid tissue | 5.52e-08 | 2 |
lymphoid tissue | 5.52e-08 | 2 |
subdivision of digestive tract | 2.75e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.