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FFCP PHASE1:Mm9::chrX:130811427..130811507,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=215201|HGNC=|UniProt=Q8BQJ6|association_with_transcript=0bp_to_ENSMUST00000113252,ENSMUST00000145066_5end|description=CAGE_peak_1_at_Trmt2b_5end|id=chrX:130811427..130811507,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.96e-11!193;UBERON:0004120!3.96e-11!193;UBERON:0006603!3.96e-11!193;UBERON:0004921!7.84e-09!126;UBERON:0004185!7.84e-09!126;UBERON:0001007!8.19e-09!128;UBERON:0001555!8.19e-09!128;UBERON:0007026!8.19e-09!128;UBERON:0004535!1.12e-08!23;UBERON:0001009!1.12e-08!23;UBERON:0003914!1.79e-08!47;UBERON:0004119!3.39e-08!130;UBERON:0000925!3.39e-08!130;UBERON:0006595!3.39e-08!130;UBERON:0007100!6.56e-08!18;UBERON:0000948!6.56e-08!18;UBERON:0005498!6.56e-08!18;UBERON:0004140!6.56e-08!18;UBERON:0009881!6.56e-08!18;UBERON:0004141!6.56e-08!18;UBERON:0003084!6.56e-08!18;UBERON:0007005!6.56e-08!18;UBERON:0004139!6.56e-08!18;UBERON:0004291!6.56e-08!18;UBERON:0005409!3.59e-07!59;UBERON:0003104!4.43e-07!131;UBERON:0009142!4.43e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.12e-08,23;UBERON:0001009,1.12e-08,23;UBERON:0003914,1.79e-08,47;UBERON:0004921,2.81e-08,114;UBERON:0001007,3.00e-08,116;UBERON:0001555,3.00e-08,116;UBERON:0007026,3.00e-08,116;UBERON:0007100,6.56e-08,18;UBERON:0000948,6.56e-08,18;UBERON:0005498,6.56e-08,18;UBERON:0004140,6.56e-08,18;UBERON:0009881,6.56e-08,18;UBERON:0004141,6.56e-08,18;UBERON:0003084,6.56e-08,18;UBERON:0007005,6.56e-08,18;UBERON:0004139,6.56e-08,18;UBERON:0004291,6.56e-08,18;UBERON:0004119,1.24e-07,118;UBERON:0000925,1.24e-07,118;UBERON:0006595,1.24e-07,118;UBERON:0005409,4.34e-07,47|phase1_expression=13.1322054625931,13.6100408979351,13.6499771816861,28.1291716515352,26.0465779572101,16.6200479192771,20.5579123724063,37.7040104449403,3.23814060948833,2.80877431586392,4.28044920563762,5.02564601670619,30.816131387617,35.055581370018,16.6554880907831,22.2722794128809,13.9912375625629,45.5842828942653,42.3683599841733,32.2536135366503,18.7095238332354,38.0284343099391,38.1351692142846,30.2385679079539,21.3350631392468,17.2269589234506,17.6612418425221,20.2542958724736,28.1234660795433,24.6989527164732,14.4124831925948,13.9706748161119,20.2971379902908,15.8481681015439,31.4848265528889,29.5897668738116,31.0337421518801,27.6230876286359,24.2213956802378,24.0820922227947,22.9410280332096,28.6879103682547,20.3914348273085,31.2224108579432,35.4819259268301,24.9623582939887,6.25913075478431,12.8634842264463,12.0827400503959,13.8045228342741,20.2980311356776,7.18762821824858,33.0531733933741,19.5847778343063,28.5679729271094,15.1783067261209,16.9054729563866,23.2052441524849,4.24864567805155,3.70293685490423,3.80298842103708,9.4876468979357,9.78224275722253,11.6986963246582,4.94433181283487,12.0781619540837,7.78960287347852,3.84218305321555,7.77672092313582,4.86021377994086,5.67877395648731,11.1403883917483,10.6016899656774,5.14461356702807,4.60058260887535,3.67687514644008,23.1243350098716,20.3022867555448,22.5801603886678,2.50583946687368,4.48289453651807,0.52091337055676,22.3346399201105,28.7008931116157,18.7941844765476,8.54422897873636,10.3931326983345,5.59198337475902,4.01348824665875,13.3005945787943,31.5952292684829,37.858650587181,15.6393406752783,30.2233787317178,27.9403859502498,29.1217476613268,36.9368824946507,28.6322941931137,22.6013824004496,19.4336765980687,14.3660288172214,10.2661181931454,0,0,19.9171757730317,18.2419103142071,16.1767822404731,28.4317860500459,71.2079180029722,55.8142442883741,16.3076207160168,33.4912026143355,29.7493991460315,34.3647620459979,38.4515072333755,41.0929753648039,10.8765785803125,79.9634443767111,48.6535803572431,23.9414937922166,19.654895142975,25.2135131630315,55.9175283654366,29.5708604981663,21.9919042154128,40.3622147229574,23.8432097766781,20.9965955847693,29.480292680951,35.6501721783478,21.9600289352941,4.64921102817598,17.0347833788431,13.5529192385075,30.5448425502553,20.6046404096052,19.1458004038595,31.5993705349636,34.6230179054134,25.0425808504904,18.7373437866293,15.6333431014762,17.1059023315082,21.2493793148358,15.4442853073514,20.1138540847214,14.523767306758,29.4921842642478,15.7364634840975,16.8304411349359,16.8913079197391,20.1660073833369,31.9754336609438,38.6559904839605,36.217656007798,14.3304672109315,30.8973802417823,34.7419674604865,27.8480229407681,41.2180287345649,49.7195247159924,48.436694533013,50.1898839440646,60.0130906829582,64.1751189611494,74.8759302096313,57.9470547023177,49.7420358484142,57.5959474697182,62.5478038141353,64.8550476366846,72.2227937881142,77.5011906977409,74.7529752495271,17.0334858336943,6.07137213037778,52.5365864944239,29.618463466317,24.3148605610167,27.8684006232526,35.8251542475419,35.899667382955,39.5832918043869,39.9473814836374,39.860441169739,40.0218459979346,41.7216446608447,49.3412050662054,42.5021709919682,38.6492345721315,46.4696807230593,39.031689557856,29.9675283505869,22.6212054967263,25.9227792048085,32.3805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|EntrezGene=215201
|HGNC=
|UniProt=Q8BQJ6
|association_with_transcript=0bp_to_ENSMUST00000113252,ENSMUST00000145066_5end
|description=CAGE_peak_1_at_Trmt2b_5end
|id=chrX:130811427..130811507,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!3.96e-11!193;UBERON:0004120!3.96e-11!193;UBERON:0006603!3.96e-11!193;UBERON:0004921!7.84e-09!126;UBERON:0004185!7.84e-09!126;UBERON:0001007!8.19e-09!128;UBERON:0001555!8.19e-09!128;UBERON:0007026!8.19e-09!128;UBERON:0004535!1.12e-08!23;UBERON:0001009!1.12e-08!23;UBERON:0003914!1.79e-08!47;UBERON:0004119!3.39e-08!130;UBERON:0000925!3.39e-08!130;UBERON:0006595!3.39e-08!130;UBERON:0007100!6.56e-08!18;UBERON:0000948!6.56e-08!18;UBERON:0005498!6.56e-08!18;UBERON:0004140!6.56e-08!18;UBERON:0009881!6.56e-08!18;UBERON:0004141!6.56e-08!18;UBERON:0003084!6.56e-08!18;UBERON:0007005!6.56e-08!18;UBERON:0004139!6.56e-08!18;UBERON:0004291!6.56e-08!18;UBERON:0005409!3.59e-07!59;UBERON:0003104!4.43e-07!131;UBERON:0009142!4.43e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.12e-08,23;UBERON:0001009,1.12e-08,23;UBERON:0003914,1.79e-08,47;UBERON:0004921,2.81e-08,114;UBERON:0001007,3.00e-08,116;UBERON:0001555,3.00e-08,116;UBERON:0007026,3.00e-08,116;UBERON:0007100,6.56e-08,18;UBERON:0000948,6.56e-08,18;UBERON:0005498,6.56e-08,18;UBERON:0004140,6.56e-08,18;UBERON:0009881,6.56e-08,18;UBERON:0004141,6.56e-08,18;UBERON:0003084,6.56e-08,18;UBERON:0007005,6.56e-08,18;UBERON:0004139,6.56e-08,18;UBERON:0004291,6.56e-08,18;UBERON:0004119,1.24e-07,118;UBERON:0000925,1.24e-07,118;UBERON:0006595,1.24e-07,118;UBERON:0005409,4.34e-07,47
|phase1_expression=13.1322054625931,13.6100408979351,13.6499771816861,28.1291716515352,26.0465779572101,16.6200479192771,20.5579123724063,37.7040104449403,3.23814060948833,2.80877431586392,4.28044920563762,5.02564601670619,30.816131387617,35.055581370018,16.6554880907831,22.2722794128809,13.9912375625629,45.5842828942653,42.3683599841733,32.2536135366503,18.7095238332354,38.0284343099391,38.1351692142846,30.2385679079539,21.3350631392468,17.2269589234506,17.6612418425221,20.2542958724736,28.1234660795433,24.6989527164732,14.4124831925948,13.9706748161119,20.2971379902908,15.8481681015439,31.4848265528889,29.5897668738116,31.0337421518801,27.6230876286359,24.2213956802378,24.0820922227947,22.9410280332096,28.6879103682547,20.3914348273085,31.2224108579432,35.4819259268301,24.9623582939887,6.25913075478431,12.8634842264463,12.0827400503959,13.8045228342741,20.2980311356776,7.18762821824858,33.0531733933741,19.5847778343063,28.5679729271094,15.1783067261209,16.9054729563866,23.2052441524849,4.24864567805155,3.70293685490423,3.80298842103708,9.4876468979357,9.78224275722253,11.6986963246582,4.94433181283487,12.0781619540837,7.78960287347852,3.84218305321555,7.77672092313582,4.86021377994086,5.67877395648731,11.1403883917483,10.6016899656774,5.14461356702807,4.60058260887535,3.67687514644008,23.1243350098716,20.3022867555448,22.5801603886678,2.50583946687368,4.48289453651807,0.52091337055676,22.3346399201105,28.7008931116157,18.7941844765476,8.54422897873636,10.3931326983345,5.59198337475902,4.01348824665875,13.3005945787943,31.5952292684829,37.858650587181,15.6393406752783,30.2233787317178,27.9403859502498,29.1217476613268,36.9368824946507,28.6322941931137,22.6013824004496,19.4336765980687,14.3660288172214,10.2661181931454,0,0,19.9171757730317,18.2419103142071,16.1767822404731,28.4317860500459,71.2079180029722,55.8142442883741,16.3076207160168,33.4912026143355,29.7493991460315,34.3647620459979,38.4515072333755,41.0929753648039,10.8765785803125,79.9634443767111,48.6535803572431,23.9414937922166,19.654895142975,25.2135131630315,55.9175283654366,29.5708604981663,21.9919042154128,40.3622147229574,23.8432097766781,20.9965955847693,29.480292680951,35.6501721783478,21.9600289352941,4.64921102817598,17.0347833788431,13.5529192385075,30.5448425502553,20.6046404096052,19.1458004038595,31.5993705349636,34.6230179054134,25.0425808504904,18.7373437866293,15.6333431014762,17.1059023315082,21.2493793148358,15.4442853073514,20.1138540847214,14.523767306758,29.4921842642478,15.7364634840975,16.8304411349359,16.8913079197391,20.1660073833369,31.9754336609438,38.6559904839605,36.217656007798,14.3304672109315,30.8973802417823,34.7419674604865,27.8480229407681,41.2180287345649,49.7195247159924,48.436694533013,50.1898839440646,60.0130906829582,64.1751189611494,74.8759302096313,57.9470547023177,49.7420358484142,57.5959474697182,62.5478038141353,64.8550476366846,72.2227937881142,77.5011906977409,74.7529752495271,17.0334858336943,6.07137213037778,52.5365864944239,29.618463466317,24.3148605610167,27.8684006232526,35.8251542475419,35.899667382955,39.5832918043869,39.9473814836374,39.860441169739,40.0218459979346,41.7216446608447,49.3412050662054,42.5021709919682,38.6492345721315,46.4696807230593,39.031689557856,29.9675283505869,22.6212054967263,25.9227792048085,32.380561127405,32.5840178441611,22.5837340046826,38.5110511086727,48.7113488332687,54.6355572887984,46.7675251263624,48.3217782152053,25.5273011745624,17.8868685553015,24.2851081375642,19.2717115319078,20.9824128984603,25.462585178142,24.1664755458681,32.5891805817821,28.0052641451843,34.5043695665651,30.1434167611488,44.3093495822676,38.1394105700139,47.7197119968286,35.7008205808892,31.9623018988226,18.380666941737,23.4669566076517,24.4432923516271,31.9178737672363,34.0037702606886,30.9456733151818,17.1717610114863,29.1625016596453,24.1396511717165,21.0480294627883,27.6929001869597,32.8101465545202,27.7726192476502,27.142431109069,26.1074728232981,30.4893849271802,21.2471294654644,35.3211297973142,32.5848488726325,19.0164536636943,29.2866275557073,16.4064274096453,16.0079885161622,20.8960695800815,19.3564726341567,17.1554979043443,15.5692091933858,20.2405350837447,19.5811424800579,17.392662229647,29.2402397943844,47.4079884595617,22.7923972694087,21.0124177566113,42.0673813579965,25.2215762845929,31.0759214278376,22.6742667723563,31.8742584787468,26.8724722521503,27.6691633149535,21.4495483329624,19.9943551212628,35.2932404600874,31.2876390356458,28.4630243152497,33.0033738394198,55.1512161321137,17.2858650270058,21.2148241403717,15.8609405923378,27.1330557472679,20.8691516594423,21.8850197400821,20.0946866415636,18.0697215209057,12.2862601101016,22.2733682035512,31.1635018059397,26.6416304048244,24.7886121454721,23.635724112621,21.9948805658382,37.8925087618806,32.8202784558602,28.3645662124435,24.3536504196603,29.4459298517842,31.6459007767881,27.8856224550891,23.5641518402718,36.2054055886912,31.908931129794,34.5499934511059,63.0082607889975,25.623215480072,34.7676288786911,30.2414954301044,35.3359220264452,40.8337994205352,42.3474047648337,35.4583325061691,37.6928556457003,46.1429304918783,41.0083946637371,7.32800820289447,22.5769984526408,17.2076830075382,24.8897521080381,27.2527227538013,28.21567295696,27.1095221271692,24.0878111961308,30.1994911946047,17.1524725786464,9.50499020650956,42.3454901641759,26.5570032030115,32.8675062927447,33.9093347972045,33.477992089819,36.9547319893153,33.5345304160713,34.7070388860256,34.4295594323183,32.8451336683049,39.9271693141888,41.322141433655,38.9657958643334,45.815745655175,40.811469050738,4.43971906748129,3.94740969081693,5.70807695637867,56.4113614573996,25.3371341859096,35.1651118593149,22.723048182381,46.6462056752888,6.21227026878773,9.20650473014354,12.6037012956667,6.35856774671644,13.7016503954128,10.5755145634558,12.8254275044043,8.10578165803597,8.60970577069989,17.6038505995619,10.4825221060018,12.369771075432,13.3172212488225,25.7693120092392,19.7036372870303,18.9358813703515,26.6696073361938,27.4026626127729,23.1061830906107,19.7103825175762,27.3757643881459,26.0304351112785,25.2832070168682,25.0338345903039,22.2275264858223,28.1013277857013,21.0909473219637,21.4129234714713,18.1317796353455,21.491042339622,25.7151939289062,28.396128985494,24.3204913746267,26.5983942437161,22.77447006051,24.7920801122612,25.7928441750609,29.2007379696006,22.2718746707213,31.9851094844911,20.5238581354821,18.6173471689815,23.735400503842,21.3812840836633,29.7076180910958,16.4874981439044,29.241451055676,24.0655580534094,26.0152131613627,25.8091960369833,29.2153472881731
|short_description=p1@Trmt2b
}}

Revision as of 19:17, 14 September 2013

Short description:p1@Trmt2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trmt2b_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000113252, ENSMUST00000145066_5end
EntrezGene:Trmt2b
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Trmt2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I328.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.56
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E937.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E430.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A322.27
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A245.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A442.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A632.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H238.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I938.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D130.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.34
GP2+ M cell, pool1.CNhs13228.11845-124H917.23
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I220.25
Ileum epithelium, pool1.CNhs13199.10252-104B928.12
Ileum epithelium, pool2.CNhs13232.10253-104C124.70
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F531.48
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F629.59
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F731.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G827.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H124.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D935.48
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.86
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A128.57
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.18
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.21
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.08
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.58
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D94.01
Mouse Schwann, donor2.CNhs12573.11746-123F913.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.60
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.22
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.12
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A736.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B628.43
accessory axillary lymph node, adult.CNhs10475.1063-29H971.21
adrenal gland, adult.CNhs10508.49-24D755.81
adrenal gland, embryo E14.CNhs11038.406-44C516.31
adrenal gland, embryo E16.CNhs11004.1254-43D633.49
adrenal gland, embryo E17.CNhs11043.1263-45I129.75
adrenal gland, embryo E18.CNhs11026.1262-18F534.36
adrenal gland, neonate N00.CNhs11191.1311-23C138.45
adrenal gland, neonate N25.CNhs11223.1377-27I341.09
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H179.96
bone (os femoris), adult.CNhs10483.56-12G248.65
bone (os femoris), neonate N02.CNhs11227.1985-43F523.94
bone (os femoris), neonate N16.CNhs11225.1525-43A619.65
bone (os femoris), neonate N20.CNhs11195.1350-25C325.21
cecum, adult.CNhs10467.37-13H455.92
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I221.99
colon, adult.CNhs10468.36-18H740.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.48
corpora quadrigemina, adult.CNhs10501.16-22A435.65
corpus striatum, adult.CNhs10487.19-21D821.96
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D517.03
cortex, neonate N30.CNhs11107.1392-42F213.55
diencephalon, adult.CNhs10482.20-12F230.54
diencephalon, neonate N30.CNhs11201.1388-42B220.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.15
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A231.60
epididymis, adult.CNhs10490.58-23B234.62
eyeball, adult.CNhs10484.31-12G425.04
eyeball, embryo E12.CNhs11016.345-16C618.74
eyeball, embryo E14.CNhs10521.399-16E215.63
eyeball, embryo E15.CNhs10593.426-16C917.11
eyeball, embryo E17.CNhs11023.1261-18D421.25
eyeball, neonate N00.CNhs11207.633-15C615.44
eyeball, neonate N01.CNhs11140.1532-43E720.11
eyeball, neonate N02.CNhs11205.1551-44G814.52
eyeball, neonate N16.CNhs11188.777-19A229.49
forelimb, embryo E11.CNhs10596.335-25E215.74
forelimb, embryo E12.CNhs10600.359-14H216.83
forelimb, embryo E13.CNhs10589.384-1E216.89
forelimb, embryo E14.CNhs10577.413-26A820.17
forelimb, embryo E15.CNhs11007.437-20E731.98
forelimb, embryo E17.CNhs10598.1517-43C438.66
forelimb, embryo E18.CNhs11008.1520-43B536.22
gonad, embryo E13.CNhs11044.1564-45I614.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C830.90
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D234.74
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.85
heart, embryo E11.CNhs10586.331-24E941.22
heart, embryo E12.CNhs11015.353-12F549.72
heart, embryo E13.CNhs11013.376-3I948.44
heart, embryo E14.CNhs10597.403-26D450.19
heart, embryo E15.CNhs11017.431-16C860.01
heart, embryo E16.CNhs11021.457-17C664.18
heart, embryo E17.CNhs11025.479-18E574.88
heart, embryo E18.CNhs11030.1283-20G357.95
heart, neonate N00.CNhs11213.639-21E349.74
heart, neonate N03.CNhs11221.1349-25I257.60
heart, neonate N10.CNhs11118.749-24G162.55
heart, neonate N16.CNhs11209.782-15G164.86
heart, neonate N20.CNhs11127.821-26I672.22
heart, neonate N25.CNhs11196.1351-25D377.50
heart, neonate N30.CNhs11202.1390-42D274.75
hippocampus, adult.CNhs10478.13-16E817.03
hippocampus, neonate N00.CNhs11228.627-43G16.07
intestinal mucosa, adult.CNhs10506.860-29I352.54
intestine, adult.CNhs10496.178-9A329.62
intestine, embryo E12.CNhs11019.1251-16I524.31
intestine, embryo E13.CNhs11010.381-16D527.87
intestine, embryo E15.CNhs10602.976-16D835.83
intestine, embryo E16.CNhs10585.463-22H435.90
intestine, embryo E17.CNhs10582.482-18D339.58
intestine, embryo E18.CNhs10526.1289-20F739.95
intestine, neonate N00.CNhs11126.644-26D139.86
intestine, neonate N01.CNhs11192.1322-23E940.02
intestine, neonate N06.CNhs11102.688-20B841.72
intestine, neonate N07.CNhs11095.720-20F249.34
intestine, neonate N10.CNhs11098.755-23A542.50
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E346.47
intestine, neonate N30.CNhs11131.1384-42G139.03
kidney, embryo E14.CNhs10606.411-4I929.97
kidney, embryo E15.CNhs10997.434-16F822.62
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I232.38
kidney, embryo E18.CNhs11001.1288-20C732.58
kidney, neonate N00.CNhs11214.646-21G722.58
kidney, neonate N10.CNhs11206.758-6D538.51
kidney, neonate N20.CNhs11113.832-19I148.71
kidney, neonate N25.CNhs11122.1353-25F354.64
kidney, neonate N30.CNhs11203.1385-42H146.77
liver, adult pregnant day01.CNhs10466.508-5B248.32
liver, embryo E12.CNhs10601.355-15F825.53
liver, embryo E13.CNhs10524.378-3H617.89
liver, embryo E14.CNhs10594.409-16E124.29
liver, embryo E15.CNhs10520.433-16D719.27
liver, embryo E16.CNhs10523.462-17F520.98
liver, embryo E17.CNhs10510.481-18A325.46
liver, embryo E18.CNhs10579.499-43G424.17
liver, neonate N00.CNhs11117.641-24F432.59
liver, neonate N03.CNhs11123.1345-25G228.01
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H230.14
liver, neonate N10.CNhs11115.751-24B944.31
liver, neonate N20.CNhs11220.823-25A338.14
liver, neonate N25.CNhs11198.1368-26H147.72
liver, neonate N30.CNhs11106.1382-42D135.70
lung, adult.CNhs10474.28-22B131.96
lung, embryo E12.CNhs10522.354-16G218.38
lung, embryo E14.CNhs10604.404-26F823.47
lung, embryo E15.CNhs11020.432-17C524.44
lung, embryo E16.CNhs10998.458-17B631.92
lung, embryo E17.CNhs10605.480-44A634.00
lung, embryo E18.CNhs10583.1287-20I630.95
lung, neonate N00.CNhs11224.640-42C617.17
lung, neonate N06.CNhs11212.683-20E529.16
lung, neonate N07.CNhs11111.715-19A324.14
lung, neonate N10.CNhs11219.750-23E621.05
lung, neonate N20.CNhs11109.822-18A427.69
lung, neonate N25.CNhs11119.1359-25C732.81
lung, neonate N30.CNhs11133.1394-42H227.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A126.11
mammary gland, adult lactating day02.CNhs10480.595-22B630.49
mammary gland, adult pregnant day19.CNhs10476.588-5H221.25
medulla oblongata, adult.CNhs10477.17-12C235.32
medulla oblongata, neonate N30.CNhs11200.1396-42A332.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.16
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.39
olfactory brain, adult.CNhs10489.18-22I929.24
ovary, adult.CNhs10507.91-2I747.41
ovary, embryo E18.CNhs11040.505-44H722.79
ovary, neonate N00.CNhs11217.1299-22I421.01
oviduct, adult pregnant day01.CNhs10500.988-6G642.07
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F431.08
pancreas, embryo E15.CNhs11042.1556-45F222.67
pancreas, embryo E16.CNhs11003.460-26E531.87
pancreas, embryo E17.CNhs10599.1558-45G326.87
pancreas, embryo E18.CNhs10580.1535-43I727.67
pancreas, neonate N00.CNhs11105.645-26G921.45
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D835.29
pancreas, neonate N16.CNhs11136.787-43B631.29
pancreas, neonate N25.CNhs11094.1555-45E228.46
pancreas, neonate N30.CNhs11182.1548-44H533.00
pituitary gland, adult.CNhs10493.21-1G855.15
pituitary gland, embryo E12.CNhs11018.346-16E617.29
pituitary gland, embryo E13.CNhs11009.370-44C721.21
pituitary gland, embryo E14.CNhs11037.398-44A515.86
pituitary gland, embryo E15.CNhs10592.427-16B927.13
pituitary gland, embryo E16.CNhs11036.449-43F620.87
pituitary gland, embryo E17.CNhs11039.1265-44F521.89
pituitary gland, neonate N00.CNhs11190.1308-22E920.09
placenta, adult pregnant day10.CNhs10472.539-13I718.07
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F822.27
skin, adult.CNhs10492.30-1C331.16
skin, neonate N00.CNhs11124.650-25G426.64
skin, neonate N03.CNhs11215.662-22H324.79
skin, neonate N06.CNhs11097.693-20I523.64
skin, neonate N10.CNhs11108.762-6C421.99
small intestine, neonate N16.CNhs11114.790-21I137.89
spinal cord, adult.CNhs10505.24-13C932.82
spleen, adult.CNhs10465.25-2G228.36
spleen, embryo E16.CNhs11035.461-43C124.35
spleen, embryo E18.CNhs11011.1271-21F229.45
spleen, neonate N10.CNhs11116.752-24D131.65
spleen, neonate N20.CNhs11112.824-19H127.89
spleen, neonate N25.CNhs11099.1354-25G323.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C636.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D334.55
stomach, adult.CNhs10503.33-1H663.01
stomach, embryo E12.CNhs10588.356-43E325.62
stomach, embryo E15.CNhs10603.1252-16G834.77
stomach, embryo E16.CNhs11022.459-17D430.24
stomach, embryo E17.CNhs11006.1035-18D535.34
stomach, embryo E18.CNhs10999.1286-20C640.83
stomach, neonate N03.CNhs11193.1340-24B842.35
stomach, neonate N07.CNhs11210.718-18A935.46
stomach, neonate N25.CNhs11104.1355-25E437.69
stomach, neonate N30.CNhs11134.1386-42I146.14
submandibular gland, adult.CNhs10469.59-29C141.01
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F522.58
testis, embryo E15.CNhs11034.443-27C517.21
testis, embryo E16.CNhs11033.470-26G524.89
testis, embryo E17.CNhs11029.486-18I527.25
testis, embryo E18.CNhs11027.503-18G528.22
testis, neonate N00.CNhs11189.1300-22B727.11
testis, neonate N07.CNhs11222.726-26I424.09
testis, neonate N10.CNhs11204.763-44D930.20
testis, neonate N20.CNhs11110.839-18H317.15
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B542.35
thymus, embryo E14.CNhs11041.402-44I426.56
thymus, embryo E15.CNhs11005.430-45I232.87
thymus, embryo E16.CNhs11002.456-26C533.91
thymus, embryo E17.CNhs10581.478-18C133.48
thymus, embryo E18.CNhs10595.1273-19G436.95
thymus, neonate N02.CNhs11181.1541-43F833.53
thymus, neonate N03.CNhs11137.2104-43C734.71
thymus, neonate N06.CNhs11197.681-26C434.43
thymus, neonate N07.CNhs11211.713-19D332.85
thymus, neonate N10.CNhs11194.748-24E439.93
thymus, neonate N20.CNhs11186.820-7A241.32
thymus, neonate N25.CNhs11125.1362-25G738.97
thymus, neonate N30.CNhs11132.1393-42G245.82
tongue, adult.CNhs10499.32-1B440.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.71
urinary bladder, adult.CNhs10481.879-12E456.41
uterus, adult pregnant day19.CNhs10497.590-15F525.34
uterus, adult.CNhs10509.92-27E535.17
vagina, adult.CNhs10502.89-27D522.72
vesicular gland, adult.CNhs10491.51-27F846.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I810.48
whole body, embryo E12.CNhs10587.857-27C912.37
whole body, embryo E13.CNhs10512.372-23H213.32
whole body, embryo E14.5.CNhs10578.420-27D225.77
whole body, embryo E14.CNhs10519.395-14B119.70
whole body, embryo E16.CNhs10514.453-14F218.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.40
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.71
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.41
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.49
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G528.40
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.32
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.77
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G524.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.99
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.38
whole body, embryo E17.5.CNhs10513.490-9F929.71
whole body, embryo E17.CNhs10517.475-3I516.49
whole body, embryo E18.CNhs10516.493-3B329.24
whole body, neonate N00.CNhs10525.657-19C224.07
whole body, neonate N01.CNhs10576.659-23C626.02
whole body, neonate N06.CNhs10515.692-21D125.81
whole body, neonate N10.CNhs10518.761-6B429.22





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cardiovascular system1.12e-0823
circulatory system1.12e-0823
epithelial tube1.79e-0847
subdivision of digestive tract2.81e-08114
digestive system3.00e-08116
digestive tract3.00e-08116
primitive gut3.00e-08116
primary circulatory organ6.56e-0818
heart6.56e-0818
primitive heart tube6.56e-0818
primary heart field6.56e-0818
anterior lateral plate mesoderm6.56e-0818
heart tube6.56e-0818
heart primordium6.56e-0818
cardiac mesoderm6.56e-0818
cardiogenic plate6.56e-0818
heart rudiment6.56e-0818
endoderm-derived structure1.24e-07118
endoderm1.24e-07118
presumptive endoderm1.24e-07118
gastrointestinal system4.34e-0747







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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