FFCP PHASE1:Mm9::chrX:133654667..133654672,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13984|HGNC=|MCL_coexpression_id=241|UniProt=A2AG22|association_with_transcript=37bp_to_ENSMUST00000113066_5end|description=CAGE_peak_1_at_Esx1_5end|id=chrX:133654667..133654672,-|ontology_enrichment_celltype=CL:0000764!5.18e-14!3;CL:0000765!5.18e-14!3;CL:0000038!5.18e-14!3;CL:0000547!5.18e-14!3;CL:0000349!4.25e-13!3;CL:0000351!4.25e-13!3|ontology_enrichment_celltype_v019_2=CL:0000764,1.42e-20,3;CL:0000765,1.42e-20,3;CL:0000038,1.42e-20,3;CL:0000547,1.42e-20,3;CL:0000349,3.54e-19,3;CL:0000351,3.54e-19,3;CL:0000050,3.22e-07,9|ontology_enrichment_disease=DOID:2531!5.18e-14!3;DOID:0060083!5.18e-14!3;DOID:1240!5.18e-14!3;DOID:0050686!3.23e-07!6|ontology_enrichment_disease_v019_2=DOID:2531,1.42e-20,3;DOID:0060083,1.42e-20,3;DOID:1240,1.42e-20,3;DOID:0050686,1.39e-10,6|ontology_enrichment_uberon=UBERON:0003133!3.83e-22!24;UBERON:0004176!4.63e-22!17;UBERON:0009196!4.63e-22!17;UBERON:0009117!4.63e-22!17;UBERON:0000991!9.45e-21!18;UBERON:0005564!9.45e-21!18;UBERON:0005156!2.75e-20!26;UBERON:0000990!2.75e-20!26;UBERON:0000473!1.52e-17!14;UBERON:0003135!2.63e-16!15;UBERON:0003101!3.19e-15!16;UBERON:0000079!3.19e-15!16;UBERON:0000358!4.25e-13!3;UBERON:0000307!4.25e-13!3;UBERON:0005631!8.95e-13!3;UBERON:0000478!8.95e-13!3;UBERON:0000158!8.95e-13!3;UBERON:0002323!2.70e-09!37;UBERON:0004458!2.70e-09!37;UBERON:0001987!3.91e-09!2;UBERON:0003124!3.91e-09!2;UBERON:0004340!3.91e-09!2;UBERON:0003886!5.22e-09!38;UBERON:0002553!9.75e-09!39;UBERON:0003134!3.95e-08!8;UBERON:0000474!3.07e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.54e-19,3;UBERON:0000307,3.54e-19,3;UBERON:0007010,3.54e-19,3;UBERON:0005631,1.11e-18,3;UBERON:0000478,1.11e-18,3;UBERON:0000158,1.11e-18,3;UBERON:0001987,4.00e-13,2;UBERON:0003124,4.00e-13,2;UBERON:0004340,4.00e-13,2;UBERON:0003133,3.22e-09,24;UBERON:0005156,1.75e-08,26;UBERON:0000990,1.75e-08,26;UBERON:0000473,1.20e-07,14;UBERON:0000305,3.16e-07,1;UBERON:0003135,3.79e-07,15;UBERON:0005795,5.23e-07,4;UBERON:0000995,5.23e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,187.334048670591,150.69087295822,47.5445043046316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,1.97755974187499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,6.35496212591461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0572610568411,0,0,0,0.129159823477731,0.337912250981556,0.938857909166032,0.651021924219751,53.3734063126868,19.8098979077325,16.9937703692141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.5475224147182,2.78112955489375,13.7665385418544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Esx1}} | ||
|EntrezGene=13984 | |||
|HGNC= | |||
|MCL_coexpression_id=241 | |||
|UniProt=A2AG22 | |||
|association_with_transcript=37bp_to_ENSMUST00000113066_5end | |||
|description=CAGE_peak_1_at_Esx1_5end | |||
|id=chrX:133654667..133654672,- | |||
|ontology_enrichment_celltype=CL:0000764!5.18e-14!3;CL:0000765!5.18e-14!3;CL:0000038!5.18e-14!3;CL:0000547!5.18e-14!3;CL:0000349!4.25e-13!3;CL:0000351!4.25e-13!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.42e-20,3;CL:0000765,1.42e-20,3;CL:0000038,1.42e-20,3;CL:0000547,1.42e-20,3;CL:0000349,3.54e-19,3;CL:0000351,3.54e-19,3;CL:0000050,3.22e-07,9 | |||
|ontology_enrichment_disease=DOID:2531!5.18e-14!3;DOID:0060083!5.18e-14!3;DOID:1240!5.18e-14!3;DOID:0050686!3.23e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.42e-20,3;DOID:0060083,1.42e-20,3;DOID:1240,1.42e-20,3;DOID:0050686,1.39e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0003133!3.83e-22!24;UBERON:0004176!4.63e-22!17;UBERON:0009196!4.63e-22!17;UBERON:0009117!4.63e-22!17;UBERON:0000991!9.45e-21!18;UBERON:0005564!9.45e-21!18;UBERON:0005156!2.75e-20!26;UBERON:0000990!2.75e-20!26;UBERON:0000473!1.52e-17!14;UBERON:0003135!2.63e-16!15;UBERON:0003101!3.19e-15!16;UBERON:0000079!3.19e-15!16;UBERON:0000358!4.25e-13!3;UBERON:0000307!4.25e-13!3;UBERON:0005631!8.95e-13!3;UBERON:0000478!8.95e-13!3;UBERON:0000158!8.95e-13!3;UBERON:0002323!2.70e-09!37;UBERON:0004458!2.70e-09!37;UBERON:0001987!3.91e-09!2;UBERON:0003124!3.91e-09!2;UBERON:0004340!3.91e-09!2;UBERON:0003886!5.22e-09!38;UBERON:0002553!9.75e-09!39;UBERON:0003134!3.95e-08!8;UBERON:0000474!3.07e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.54e-19,3;UBERON:0000307,3.54e-19,3;UBERON:0007010,3.54e-19,3;UBERON:0005631,1.11e-18,3;UBERON:0000478,1.11e-18,3;UBERON:0000158,1.11e-18,3;UBERON:0001987,4.00e-13,2;UBERON:0003124,4.00e-13,2;UBERON:0004340,4.00e-13,2;UBERON:0003133,3.22e-09,24;UBERON:0005156,1.75e-08,26;UBERON:0000990,1.75e-08,26;UBERON:0000473,1.20e-07,14;UBERON:0000305,3.16e-07,1;UBERON:0003135,3.79e-07,15;UBERON:0005795,5.23e-07,4;UBERON:0000995,5.23e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,187.334048670591,150.69087295822,47.5445043046316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,1.97755974187499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,6.35496212591461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0572610568411,0,0,0,0.129159823477731,0.337912250981556,0.938857909166032,0.651021924219751,53.3734063126868,19.8098979077325,16.9937703692141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.5475224147182,2.78112955489375,13.7665385418544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Esx1 | |||
}} |
Revision as of 19:22, 14 September 2013
Short description: | p1@Esx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Esx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:241 |
Association with transcript: | 37bp_to_ENSMUST00000113066_5end |
EntrezGene: | Esx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.42e-20 | 3 |
erythroblast | 1.42e-20 | 3 |
erythroid progenitor cell | 1.42e-20 | 3 |
proerythroblast | 1.42e-20 | 3 |
extraembryonic cell | 3.54e-19 | 3 |
trophoblast cell | 3.54e-19 | 3 |
megakaryocyte-erythroid progenitor cell | 3.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 3.54e-19 | 3 |
blastula | 3.54e-19 | 3 |
cleaving embryo | 3.54e-19 | 3 |
extraembryonic membrane | 1.11e-18 | 3 |
extraembryonic structure | 1.11e-18 | 3 |
membranous layer | 1.11e-18 | 3 |
placenta | 4.00e-13 | 2 |
chorion | 4.00e-13 | 2 |
allantois | 4.00e-13 | 2 |
reproductive organ | 3.22e-09 | 24 |
reproductive structure | 1.75e-08 | 26 |
reproductive system | 1.75e-08 | 26 |
testis | 1.20e-07 | 14 |
amnion | 3.16e-07 | 1 |
male reproductive organ | 3.79e-07 | 15 |
embryonic uterus | 5.23e-07 | 4 |
uterus | 5.23e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.42e-20 | 3 |
immune system cancer | 1.42e-20 | 3 |
leukemia | 1.42e-20 | 3 |
organ system cancer | 1.39e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.