FFCP PHASE1:Mm9::chrX:45460027..45460041,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:45460027..45460041,+|id=chrX:45460027..45460041,+|ontology_enrichment_celltype=CL:0000239!1.11e-11!6;CL:0000677!1.11e-11!6;CL:0000212!1.11e-11!6;CL:0000584!1.11e-11!6;CL:0000075!7.08e-10!7;CL:0002563!1.80e-07!9;CL:0002251!1.80e-07!9;CL:0000473!3.96e-07!3;CL:0000627!3.96e-07!3;CL:0000682!3.96e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,4.44e-14,3;CL:0000239,7.35e-12,6;CL:0000677,7.35e-12,6;CL:0000584,7.35e-12,6;CL:0000075,3.48e-10,7;CL:0002563,6.04e-08,9;CL:0002251,6.04e-08,9;CL:0000066,6.98e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.13e-14!15;UBERON:0001242!2.08e-11!13;UBERON:0000060!2.08e-11!13;UBERON:0001262!2.08e-11!13;UBERON:0004786!2.08e-11!13;UBERON:0000160!3.35e-08!43;UBERON:0005409!3.98e-08!59;UBERON:0004923!5.70e-08!24;UBERON:0003350!1.80e-07!9;UBERON:0004808!1.80e-07!9;UBERON:0001277!1.80e-07!9;UBERON:0000331!2.41e-07!3;UBERON:0002116!2.41e-07!3;UBERON:0001204!2.41e-07!3;UBERON:0001168!2.41e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.96e-22,15;UBERON:0000160,1.51e-21,31;UBERON:0002108,2.41e-18,4;UBERON:0001242,3.73e-16,13;UBERON:0001262,3.73e-16,13;UBERON:0004786,3.73e-16,13;UBERON:0000331,1.47e-14,3;UBERON:0002116,1.47e-14,3;UBERON:0001204,1.47e-14,3;UBERON:0001168,1.47e-14,3;UBERON:0005409,1.81e-13,47;UBERON:0004923,2.01e-13,24;UBERON:0001962,7.61e-09,2;UBERON:0001961,7.61e-09,2;UBERON:0001744,7.61e-09,2;UBERON:0003350,6.04e-08,9;UBERON:0004808,6.04e-08,9;UBERON:0001277,6.04e-08,9;UBERON:0001007,9.05e-07,116;UBERON:0001555,9.05e-07,116;UBERON:0007026,9.05e-07,116|phase1_expression=0,42.574999732002,31.8499467572675,8.46899791659124,9.01612313903425,0.671517087647559,0.467225281191051,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,3.89995777814189,57.997428375617,18.9535278309993,22.1935369666466,93.1114755336232,77.1212197065388,44.5678326417162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0.148442139064825,0,0,0,0,0,0.376999773989026,0,0,0,0,0.220841518460394,0,0,0,0,9.70736809792647,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74529061544512,0,0,0,0,5.39291645192533,12.1037307929829,17.5244320463843,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,5.44152920676507,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chrX:45460027..45460041,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:45460027..45460041,+ | |||
|id=chrX:45460027..45460041,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.11e-11!6;CL:0000677!1.11e-11!6;CL:0000212!1.11e-11!6;CL:0000584!1.11e-11!6;CL:0000075!7.08e-10!7;CL:0002563!1.80e-07!9;CL:0002251!1.80e-07!9;CL:0000473!3.96e-07!3;CL:0000627!3.96e-07!3;CL:0000682!3.96e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.44e-14,3;CL:0000239,7.35e-12,6;CL:0000677,7.35e-12,6;CL:0000584,7.35e-12,6;CL:0000075,3.48e-10,7;CL:0002563,6.04e-08,9;CL:0002251,6.04e-08,9;CL:0000066,6.98e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.13e-14!15;UBERON:0001242!2.08e-11!13;UBERON:0000060!2.08e-11!13;UBERON:0001262!2.08e-11!13;UBERON:0004786!2.08e-11!13;UBERON:0000160!3.35e-08!43;UBERON:0005409!3.98e-08!59;UBERON:0004923!5.70e-08!24;UBERON:0003350!1.80e-07!9;UBERON:0004808!1.80e-07!9;UBERON:0001277!1.80e-07!9;UBERON:0000331!2.41e-07!3;UBERON:0002116!2.41e-07!3;UBERON:0001204!2.41e-07!3;UBERON:0001168!2.41e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.96e-22,15;UBERON:0000160,1.51e-21,31;UBERON:0002108,2.41e-18,4;UBERON:0001242,3.73e-16,13;UBERON:0001262,3.73e-16,13;UBERON:0004786,3.73e-16,13;UBERON:0000331,1.47e-14,3;UBERON:0002116,1.47e-14,3;UBERON:0001204,1.47e-14,3;UBERON:0001168,1.47e-14,3;UBERON:0005409,1.81e-13,47;UBERON:0004923,2.01e-13,24;UBERON:0001962,7.61e-09,2;UBERON:0001961,7.61e-09,2;UBERON:0001744,7.61e-09,2;UBERON:0003350,6.04e-08,9;UBERON:0004808,6.04e-08,9;UBERON:0001277,6.04e-08,9;UBERON:0001007,9.05e-07,116;UBERON:0001555,9.05e-07,116;UBERON:0007026,9.05e-07,116 | |||
|phase1_expression=0,42.574999732002,31.8499467572675,8.46899791659124,9.01612313903425,0.671517087647559,0.467225281191051,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,3.89995777814189,57.997428375617,18.9535278309993,22.1935369666466,93.1114755336232,77.1212197065388,44.5678326417162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0.148442139064825,0,0,0,0,0,0.376999773989026,0,0,0,0,0.220841518460394,0,0,0,0,9.70736809792647,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74529061544512,0,0,0,0,5.39291645192533,12.1037307929829,17.5244320463843,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,5.44152920676507,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chrX:45460027..45460041,+ | |||
}} |
Revision as of 19:49, 14 September 2013
Short description: | p@chrX:45460027..45460041, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:45460027..45460041, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.44e-14 | 3 |
brush border epithelial cell | 7.35e-12 | 6 |
gut absorptive cell | 7.35e-12 | 6 |
enterocyte | 7.35e-12 | 6 |
columnar/cuboidal epithelial cell | 3.48e-10 | 7 |
intestinal epithelial cell | 6.04e-08 | 9 |
epithelial cell of alimentary canal | 6.04e-08 | 9 |
epithelial cell | 6.98e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.96e-22 | 15 |
intestine | 1.51e-21 | 31 |
small intestine | 2.41e-18 | 4 |
intestinal mucosa | 3.73e-16 | 13 |
wall of intestine | 3.73e-16 | 13 |
gastrointestinal system mucosa | 3.73e-16 | 13 |
ileal mucosa | 1.47e-14 | 3 |
ileum | 1.47e-14 | 3 |
mucosa of small intestine | 1.47e-14 | 3 |
wall of small intestine | 1.47e-14 | 3 |
gastrointestinal system | 1.81e-13 | 47 |
organ component layer | 2.01e-13 | 24 |
gut-associated lymphoid tissue | 7.61e-09 | 2 |
mucosa-associated lymphoid tissue | 7.61e-09 | 2 |
lymphoid tissue | 7.61e-09 | 2 |
epithelium of mucosa | 6.04e-08 | 9 |
gastrointestinal system epithelium | 6.04e-08 | 9 |
intestinal epithelium | 6.04e-08 | 9 |
digestive system | 9.05e-07 | 116 |
digestive tract | 9.05e-07 | 116 |
primitive gut | 9.05e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.