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FFCP PHASE1:Mm9::chrX:48557952..48557965,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=411|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:48557952..48557965,-|id=chrX:48557952..48557965,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000077!1.26e-16!97;UBERON:0004119!2.01e-16!130;UBERON:0000925!2.01e-16!130;UBERON:0006595!2.01e-16!130;UBERON:0004921!4.42e-16!126;UBERON:0004185!4.42e-16!126;UBERON:0001007!5.17e-16!128;UBERON:0001555!5.17e-16!128;UBERON:0007026!5.17e-16!128;UBERON:0001041!1.07e-15!92;UBERON:0003104!2.32e-12!131;UBERON:0009142!2.32e-12!131;UBERON:0000926!2.34e-10!193;UBERON:0004120!2.34e-10!193;UBERON:0006603!2.34e-10!193;UBERON:0002075!4.48e-09!19;UBERON:0000466!1.09e-07!79;UBERON:0000464!2.03e-07!57;UBERON:0001004!2.44e-07!42;UBERON:0005409!2.51e-07!59;UBERON:0000065!4.73e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.65e-12,118;UBERON:0000925,4.65e-12,118;UBERON:0006595,4.65e-12,118;UBERON:0004921,9.17e-12,114;UBERON:0001007,1.05e-11,116;UBERON:0001555,1.05e-11,116;UBERON:0007026,1.05e-11,116;UBERON:0001041,2.77e-11,80;UBERON:0002075,3.89e-09,19;UBERON:0001004,1.93e-07,42;UBERON:0000077,2.19e-07,35;UBERON:0000065,3.78e-07,41;UBERON:0005177,9.88e-07,79|phase1_expression=0.320297694209588,0,0,1.20985684522732,3.00537437967808,4.02910252588535,6.54115393667472,12.7832090207161,5.20918271961167,8.89445200023575,5.47897498321616,4.46724090373884,14.5520620441525,11.3646523144697,19.9865857089398,21.6648536107114,20.9868563438444,22.8710069884722,23.4465681465813,23.3414308488917,2.89147186513637,6.15603897445489,3.91799683708403,4.15980299262857,6.65286915094793,2.29692785646008,1.29228598847722,1.07735616342945,4.18051522804023,3.02436155711917,3.99114919179548,8.89042942843484,5.53558308826113,0,5.77703239502549,8.14549762256613,6.53341940039581,48.5496691654813,32.8160844699996,55.4935168612226,48.2349820185432,68.987593980803,42.2394007137104,1.1330713617802,0.506884656097573,1.28482726513177,0,0,0,0,0,0,14.9326519391385,9.42970784614748,20.1656279485478,1.02903774414379,2.0057340795713,1.54701627683233,0.202316460859598,0,0,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.841299845405528,0,0.441737081903227,0.367472397644862,0.191690942036473,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0,0.454357159999104,0.0755715601067855,7.8263411949453,2.58127163094416,0.679971333707751,0,1.29955283489534,1.79210754838934,4.21333260395256,17.3838929029619,17.6654483129951,14.4869225549239,0,0,2.54805239706646,14.2213340630666,16.6698101578635,11.4011939463794,9.60496445528088,6.16592950482924,13.7237078333001,2.67195850316685,4.16364784238726,4.26251669636998,3.68984795609694,1.65794904607885,3.29248379979973,0.628332956648377,3.70792451601561,1.87979163995885,46.8843592533433,5.98537344805414,8.17113618303456,14.5462575940567,3.72783522436244,0.292780797011547,0.209446706813455,12.2619386500124,7.0690923458493,5.39912457894067,8.13249453267614,0,0,0,0,0,0.20778804455956,0,4.07357455401265,11.9430691785689,8.08712826987759,9.89076722666428,4.16385417480652,1.37941262660084,3.06105620669094,1.9591626318643,1.56483948048054,1.7935920839879,1.87403449119458,2.06962696591213,4.95806383745537,9.45530400839096,11.4368230706567,9.86380795924087,8.89751197521913,10.447564995665,8.84863186554157,11.7430217422911,10.5331978096985,9.00717674901503,10.2298859782413,4.14251545071004,4.92504725960302,3.96136535214233,6.15536312521547,6.88674811115913,3.23960937063494,5.58081467400979,2.41446061259657,3.03589890154641,1.48103864922132,2.46251196118643,1.13496333364198,0.877199924551994,1.3173006917463,0.939444931322602,0.210289948564127,0.308713837137853,4.95628174475697,6.08236303326152,5.75878276445132,6.96710015581316,6.44337306610467,9.68080918192044,9.33987784148455,10.0819581839656,9.96511029243474,6.42325923423642,6.28338022000674,4.57599885694647,5.45899443933536,11.6846523125049,8.86166004486246,7.96565093017469,1.70701110857774,5.36968009265725,6.76246414038483,5.7022371796688,4.84881217919064,3.57692681440625,3.22506339333712,3.09981310757165,2.82597710114475,1.97435462274881,1.1858105083486,13.1807633515714,11.4004217165658,19.7878658898671,18.2574109249653,15.6765153839071,11.7127891819453,18.4125527968519,6.80967952455149,10.4333337011471,10.0637744569148,7.81495990103857,3.12037673114561,2.77836765741823,2.15276896226295,4.3419916922703,9.79191907883005,4.35830247072115,6.19266910479698,5.60158783058121,11.9692026627136,13.5680068527871,19.7576221935391,6.63454402716516,9.45810864637146,8.858587585951,4.14582398509466,7.53771247692395,8.97961905702657,10.7040303350319,0,1.63171705145613,16.7199852826472,6.62248191131358,0.481651769963376,0,0,1.51482556322624,0,0.780877488593277,0,0,0,0,1.61924280669958,0.292255857911312,0,0,2.2710413633323,3.38324646967785,3.25773918707152,3.62934270539578,26.5490276679926,5.34117399540959,7.55808892411878,19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|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=411
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chrX:48557952..48557965,-
|id=chrX:48557952..48557965,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000077!1.26e-16!97;UBERON:0004119!2.01e-16!130;UBERON:0000925!2.01e-16!130;UBERON:0006595!2.01e-16!130;UBERON:0004921!4.42e-16!126;UBERON:0004185!4.42e-16!126;UBERON:0001007!5.17e-16!128;UBERON:0001555!5.17e-16!128;UBERON:0007026!5.17e-16!128;UBERON:0001041!1.07e-15!92;UBERON:0003104!2.32e-12!131;UBERON:0009142!2.32e-12!131;UBERON:0000926!2.34e-10!193;UBERON:0004120!2.34e-10!193;UBERON:0006603!2.34e-10!193;UBERON:0002075!4.48e-09!19;UBERON:0000466!1.09e-07!79;UBERON:0000464!2.03e-07!57;UBERON:0001004!2.44e-07!42;UBERON:0005409!2.51e-07!59;UBERON:0000065!4.73e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.65e-12,118;UBERON:0000925,4.65e-12,118;UBERON:0006595,4.65e-12,118;UBERON:0004921,9.17e-12,114;UBERON:0001007,1.05e-11,116;UBERON:0001555,1.05e-11,116;UBERON:0007026,1.05e-11,116;UBERON:0001041,2.77e-11,80;UBERON:0002075,3.89e-09,19;UBERON:0001004,1.93e-07,42;UBERON:0000077,2.19e-07,35;UBERON:0000065,3.78e-07,41;UBERON:0005177,9.88e-07,79
|phase1_expression=0.320297694209588,0,0,1.20985684522732,3.00537437967808,4.02910252588535,6.54115393667472,12.7832090207161,5.20918271961167,8.89445200023575,5.47897498321616,4.46724090373884,14.5520620441525,11.3646523144697,19.9865857089398,21.6648536107114,20.9868563438444,22.8710069884722,23.4465681465813,23.3414308488917,2.89147186513637,6.15603897445489,3.91799683708403,4.15980299262857,6.65286915094793,2.29692785646008,1.29228598847722,1.07735616342945,4.18051522804023,3.02436155711917,3.99114919179548,8.89042942843484,5.53558308826113,0,5.77703239502549,8.14549762256613,6.53341940039581,48.5496691654813,32.8160844699996,55.4935168612226,48.2349820185432,68.987593980803,42.2394007137104,1.1330713617802,0.506884656097573,1.28482726513177,0,0,0,0,0,0,14.9326519391385,9.42970784614748,20.1656279485478,1.02903774414379,2.0057340795713,1.54701627683233,0.202316460859598,0,0,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.841299845405528,0,0.441737081903227,0.367472397644862,0.191690942036473,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0,0.454357159999104,0.0755715601067855,7.8263411949453,2.58127163094416,0.679971333707751,0,1.29955283489534,1.79210754838934,4.21333260395256,17.3838929029619,17.6654483129951,14.4869225549239,0,0,2.54805239706646,14.2213340630666,16.6698101578635,11.4011939463794,9.60496445528088,6.16592950482924,13.7237078333001,2.67195850316685,4.16364784238726,4.26251669636998,3.68984795609694,1.65794904607885,3.29248379979973,0.628332956648377,3.70792451601561,1.87979163995885,46.8843592533433,5.98537344805414,8.17113618303456,14.5462575940567,3.72783522436244,0.292780797011547,0.209446706813455,12.2619386500124,7.0690923458493,5.39912457894067,8.13249453267614,0,0,0,0,0,0.20778804455956,0,4.07357455401265,11.9430691785689,8.08712826987759,9.89076722666428,4.16385417480652,1.37941262660084,3.06105620669094,1.9591626318643,1.56483948048054,1.7935920839879,1.87403449119458,2.06962696591213,4.95806383745537,9.45530400839096,11.4368230706567,9.86380795924087,8.89751197521913,10.447564995665,8.84863186554157,11.7430217422911,10.5331978096985,9.00717674901503,10.2298859782413,4.14251545071004,4.92504725960302,3.96136535214233,6.15536312521547,6.88674811115913,3.23960937063494,5.58081467400979,2.41446061259657,3.03589890154641,1.48103864922132,2.46251196118643,1.13496333364198,0.877199924551994,1.3173006917463,0.939444931322602,0.210289948564127,0.308713837137853,4.95628174475697,6.08236303326152,5.75878276445132,6.96710015581316,6.44337306610467,9.68080918192044,9.33987784148455,10.0819581839656,9.96511029243474,6.42325923423642,6.28338022000674,4.57599885694647,5.45899443933536,11.6846523125049,8.86166004486246,7.96565093017469,1.70701110857774,5.36968009265725,6.76246414038483,5.7022371796688,4.84881217919064,3.57692681440625,3.22506339333712,3.09981310757165,2.82597710114475,1.97435462274881,1.1858105083486,13.1807633515714,11.4004217165658,19.7878658898671,18.2574109249653,15.6765153839071,11.7127891819453,18.4125527968519,6.80967952455149,10.4333337011471,10.0637744569148,7.81495990103857,3.12037673114561,2.77836765741823,2.15276896226295,4.3419916922703,9.79191907883005,4.35830247072115,6.19266910479698,5.60158783058121,11.9692026627136,13.5680068527871,19.7576221935391,6.63454402716516,9.45810864637146,8.858587585951,4.14582398509466,7.53771247692395,8.97961905702657,10.7040303350319,0,1.63171705145613,16.7199852826472,6.62248191131358,0.481651769963376,0,0,1.51482556322624,0,0.780877488593277,0,0,0,0,1.61924280669958,0.292255857911312,0,0,2.2710413633323,3.38324646967785,3.25773918707152,3.62934270539578,26.5490276679926,5.34117399540959,7.55808892411878,19.2377181351016,12.1073776081117,11.9899707698132,8.5281336745513,14.9048829085777,12.83390562185,21.8065362975713,24.2462799722497,20.6271086496374,8.17055053809091,4.86164953884538,2.32845630808958,8.3591443662321,10.8177542521787,5.17269571046005,7.0756078858912,2.74018454203139,5.39744928546534,13.3454204644207,1.54369878638473,8.90385765883992,10.0107944551461,7.78036731573211,10.0272768962635,10.1767357841938,11.3677526285642,0.556275906031529,26.9975991660607,7.22354037871279,15.9267293537952,33.9063222608444,31.1662839203937,27.4533807847827,6.79913719975421,8.95689294871411,8.84479832348312,16.2294005062569,5.06137589729817,8.13277868507395,8.4244165841005,7.73626695253534,9.38959024108564,6.33862428008657,7.10819719237889,12.3025292732494,8.16574331738295,10.5627683224777,1.12738587736838,4.48549638131936,2.81279433777066,1.75006069509643,1.6790777052105,3.04121025883401,3.52071715937262,4.6873578543822,7.13043542094834,2.17425708743405,3.74439008135225,13.5884781870117,2.63542779877213,7.39518891586756,10.133824192268,10.2045216530464,10.1327490938445,8.65407236543776,12.4059202826645,9.89471209491847,10.592746125045,9.37683521772617,12.0847772117293,12.2189038883218,12.3889516312463,10.2028672626845,1.77588762699252,0.538283139656854,1.17519231454855,17.7734426509615,3.75364950902364,6.59345847362154,15.4345232936927,5.01572104035363,0,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0,0,3.63255716544618,7.18244772121856,7.68301225893604,8.99494853152688,7.75568701723535,5.69914876195044,8.44537565646138,6.79915688888351,9.62757628775446,6.31743029409494,8.36481689637791,8.11093267960128,5.05664140337365,6.14641463086745,5.16919220600519,5.23923060411381,6.14186927507734,4.43691207066522,4.94503080963968,5.88795680537589,6.17164654293748,6.38912902173615,5.00715998889374,5.23247099876383,5.8347815857505,7.10762706290083,5.85369513192872,7.10288220882176,5.16055632614275,8.41713407486608,4.38949567059444,4.0386837773981,4.50154147486658,5.73266312388074,6.75173138433995,3.74715866906919,7.95367468714389,6.23126056740065,5.7386499620653,5.7353768971074,6.4922993973718
|short_description=p@chrX:48557952..48557965,-
}}

Revision as of 19:52, 14 September 2013

Short description:p@chrX:48557952..48557965, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:48557952..48557965, -
Coexpression cluster:MCL_coexpression_mm9:411
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chrX:48557952..48557965-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.89
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.55
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A222.87
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.45
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G848.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H355.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G948.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H268.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H442.24
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.17
accessory axillary lymph node, adult.CNhs10475.1063-29H913.72
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G246.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H712.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.94
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H29.46
forelimb, embryo E13.CNhs10589.384-1E211.44
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E78.90
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B58.85
gonad, embryo E13.CNhs11044.1564-45I611.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C810.53
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.01
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.23
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C86.89
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E55.58
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H49.68
intestine, embryo E17.CNhs10582.482-18D39.34
intestine, embryo E18.CNhs10526.1289-20F710.08
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B86.28
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E38.86
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G73.58
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F813.18
liver, embryo E13.CNhs10524.378-3H611.40
liver, embryo E14.CNhs10594.409-16E119.79
liver, embryo E15.CNhs10520.433-16D718.26
liver, embryo E16.CNhs10523.462-17F515.68
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G418.41
liver, neonate N00.CNhs11117.641-24F46.81
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B611.97
lung, embryo E17.CNhs10605.480-44A613.57
lung, embryo E18.CNhs10583.1287-20I619.76
lung, neonate N00.CNhs11224.640-42C66.63
lung, neonate N06.CNhs11212.683-20E59.46
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H210.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E519.24
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D714.90
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B621.81
pancreas, neonate N25.CNhs11094.1555-45E224.25
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B910.82
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G313.35
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G410.01
skin, neonate N03.CNhs11215.662-22H37.78
skin, neonate N06.CNhs11097.693-20I510.03
skin, neonate N10.CNhs11108.762-6C410.18
small intestine, neonate N16.CNhs11114.790-21I111.37
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G227.00
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F215.93
spleen, neonate N10.CNhs11116.752-24D133.91
spleen, neonate N20.CNhs11112.824-19H131.17
spleen, neonate N25.CNhs11099.1354-25G327.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.84
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G88.13
stomach, embryo E16.CNhs11022.459-17D48.42
stomach, embryo E17.CNhs11006.1035-18D57.74
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B86.34
stomach, neonate N07.CNhs11210.718-18A97.11
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D97.13
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B513.59
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I27.40
thymus, embryo E16.CNhs11002.456-26C510.13
thymus, embryo E17.CNhs10581.478-18C110.20
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F88.65
thymus, neonate N03.CNhs11137.2104-43C712.41
thymus, neonate N06.CNhs11197.681-26C49.89
thymus, neonate N07.CNhs11211.713-19D310.59
thymus, neonate N10.CNhs11194.748-24E49.38
thymus, neonate N20.CNhs11186.820-7A212.08
thymus, neonate N25.CNhs11125.1362-25G712.22
thymus, neonate N30.CNhs11132.1393-42G212.39
tongue, adult.CNhs10499.32-1B410.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E417.77
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D515.43
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I83.63
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H27.68
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B46.49





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.65e-12118
endoderm4.65e-12118
presumptive endoderm4.65e-12118
subdivision of digestive tract9.17e-12114
digestive system1.05e-11116
digestive tract1.05e-11116
primitive gut1.05e-11116
foregut2.77e-1180
viscus3.89e-0919
respiratory system1.93e-0742
mixed endoderm/mesoderm-derived structure2.19e-0735
respiratory tract3.78e-0741
trunk region element9.88e-0779







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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