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FFCP PHASE1:Mm9::chrX:71002408..71002450,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=140571|HGNC=|MCL_coexpression_id=786|UniProt=A2AFF9|association_with_transcript=0bp_to_ENSMUST00000002079,ENSMUST00000146812,ENSMUST00000147127,ENSMUST00000149478,NM_019587_5end|description=CAGE_peak_1_at_Plxnb3_5end|id=chrX:71002408..71002450,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000221,3.46e-10,44;CL:0000133,3.46e-10,44;CL:0002319,1.99e-09,43;CL:0000107,2.50e-09,9;CL:0000540,3.06e-09,33;CL:0000047,3.06e-09,33;CL:0000031,3.06e-09,33;CL:0000404,3.06e-09,33;CL:0000393,6.98e-07,39;CL:0000211,6.98e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.88e-20!102;UBERON:0000924!5.88e-20!102;UBERON:0006601!5.88e-20!102;UBERON:0000073!6.43e-17!75;UBERON:0001016!6.43e-17!75;UBERON:0001017!8.46e-16!73;UBERON:0005743!8.46e-16!73;UBERON:0002346!2.29e-13!71;UBERON:0003075!2.29e-13!71;UBERON:0007284!2.29e-13!71;UBERON:0000033!1.67e-10!63;UBERON:0001049!8.55e-10!52;UBERON:0005068!8.55e-10!52;UBERON:0006241!8.55e-10!52;UBERON:0007135!8.55e-10!52;UBERON:0000955!3.28e-09!50;UBERON:0006238!3.28e-09!50;UBERON:0002616!9.81e-09!49;UBERON:0000010!1.40e-07!11;UBERON:0002021!7.28e-07!10;UBERON:0000411!7.28e-07!10;UBERON:0001950!7.28e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.60e-24,75;UBERON:0004121,1.70e-22,95;UBERON:0000924,1.70e-22,95;UBERON:0006601,1.70e-22,95;UBERON:0001017,3.48e-22,73;UBERON:0010371,9.80e-14,73;UBERON:0000073,1.78e-13,54;UBERON:0002346,2.35e-12,64;UBERON:0003075,2.35e-12,64;UBERON:0007284,2.35e-12,64;UBERON:0001049,4.66e-12,52;UBERON:0005068,4.66e-12,52;UBERON:0006241,4.66e-12,52;UBERON:0007135,4.66e-12,52;UBERON:0000010,4.29e-11,11;UBERON:0010314,3.17e-10,92;UBERON:0002021,5.75e-10,10;UBERON:0000411,5.75e-10,10;UBERON:0001950,5.75e-10,10;UBERON:0000955,1.70e-09,47;UBERON:0006238,1.70e-09,47;UBERON:0002410,2.50e-09,9;UBERON:0002616,7.64e-09,46;UBERON:0002020,8.34e-09,34;UBERON:0003076,2.12e-07,12;UBERON:0003057,2.12e-07,12;UBERON:0003080,9.82e-07,40|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,14.3808053048834,7.68436610643109,0.103689612308478,0,0,21.7094748146891,23.1911967999194,0.122490799214954,0.0958454710182364,0,9.91042928994498,17.2377906415003,14.5926206593431,0,0.0914876436024097,0,22.3346399201105,5.06486349028512,16.9606055032259,6.77645746589436,5.83723891276322,0.372798891650601,2.57469057332826,26.5256175974817,0,0,0,0,0,0,0.561777680527007,0,0,0,20.9856695467254,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.29688427812965,1.21439728736295,1.21786191324856,2.53677046981664,1.20578112442098,1.29347577849275,0.502666365318702,0,0.289198713839823,0,1.45590164952668,1.10420759230197,0.969750506270444,0,12.296793474485,16.127396424636,0,0,0,0,29.2091746839404,25.1625331550245,0.251308704225729,11.4724051326902,12.0186264945255,36.5706958424826,33.0972176658226,0.203678727700633,0.124406970610093,0,0.841767423545896,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.896796041993948,1.40552586839593,6.98499100995342,0,0,1.05570674498369,1.09597866213787,1.39023624612799,2.43776516565517,1.23469281844766,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.56748166682099,0.438599962275997,0.219550115291051,0.134206418760372,15.3511662451813,0.205809224758569,0,0,0.213288250535234,0,0.515469845288373,0.605050573870028,0.889512175379481,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.596869416123452,0.58489226135736,0,0,0,0,0.456994050438915,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0,48.3257275863254,54.1517992055979,0,2.01976741763498,2.52406575533005,1.95219372148319,20.2497993868831,14.5770966751057,35.4249891791007,27.4584234865167,4.45291771842384,3.79932615284705,9.48690667071656,9.96096080907602,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0,0,0,0.885905678642318,1.22974059177571,1.55056975900933,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.857348140126369,0.177340233642274,0.535106452806212,0.822745103010605,3.04464949114599,0,0,0.661585194164886,0.49465875882444,0.968786560175433,1.20625849856312,1.43246812803764,2.29797259643086,0,62.8591773815628,0,0,0.185194527369712,0,0,0,0,0,0,0,0,2.43983360552218,1.29606408986162,0.627264888043406,1.52853794622324,0.809186078308924,1.81837602595739,1.04702376793612,0.777689839750757,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0.295379054349154,0,0.0762068066549998,0,0.292373642219257,0,0,1.81384306892169,0,0,0,0.965947970160952,0,0,1.50057865355346,0,6.7770221114048,11.0478056761722,12.0308057822273,8.59265911718438,8.22099023724771,6.7985450765073,11.4753825039407,4.05289082901798,5.43770890781046,7.7664046762773,0.103787347584177,0.399024873401031,0.682934423016537,0.729320151204882,0,0.367687016900028,1.33348036680969,0.824140228955577,1.92551525755089,0.505394423527595,1.01391719956096,0.754505365544305,0.749132059759059,1.40855335290712,1.14870937911227,0.476293691283074,0.927074607558844,0.77163688185482,0.824171801606613,1.17759136107518,0.342869252385415,1.24233064311536,0.476872379894642,1.0174249164263,0.941093804153306,0.761531471025089,1.28049581010941,0.789209134313529,0.950628796921032,1.12228454331548,0.949080144993393,1.37906275325789,1.22769312950907,0.77468420592983,0.578719832943424,0.999242311751784,1.87145286756327,1.71896843238639,2.86932498103265,5.29419405886837,4.86922454802885|short_description=p1@Plxnb3}}
|EntrezGene=140571
|HGNC=
|MCL_coexpression_id=786
|UniProt=A2AFF9
|association_with_transcript=0bp_to_ENSMUST00000002079,ENSMUST00000146812,ENSMUST00000147127,ENSMUST00000149478,NM_019587_5end
|description=CAGE_peak_1_at_Plxnb3_5end
|id=chrX:71002408..71002450,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000221,3.46e-10,44;CL:0000133,3.46e-10,44;CL:0002319,1.99e-09,43;CL:0000107,2.50e-09,9;CL:0000540,3.06e-09,33;CL:0000047,3.06e-09,33;CL:0000031,3.06e-09,33;CL:0000404,3.06e-09,33;CL:0000393,6.98e-07,39;CL:0000211,6.98e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.88e-20!102;UBERON:0000924!5.88e-20!102;UBERON:0006601!5.88e-20!102;UBERON:0000073!6.43e-17!75;UBERON:0001016!6.43e-17!75;UBERON:0001017!8.46e-16!73;UBERON:0005743!8.46e-16!73;UBERON:0002346!2.29e-13!71;UBERON:0003075!2.29e-13!71;UBERON:0007284!2.29e-13!71;UBERON:0000033!1.67e-10!63;UBERON:0001049!8.55e-10!52;UBERON:0005068!8.55e-10!52;UBERON:0006241!8.55e-10!52;UBERON:0007135!8.55e-10!52;UBERON:0000955!3.28e-09!50;UBERON:0006238!3.28e-09!50;UBERON:0002616!9.81e-09!49;UBERON:0000010!1.40e-07!11;UBERON:0002021!7.28e-07!10;UBERON:0000411!7.28e-07!10;UBERON:0001950!7.28e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.60e-24,75;UBERON:0004121,1.70e-22,95;UBERON:0000924,1.70e-22,95;UBERON:0006601,1.70e-22,95;UBERON:0001017,3.48e-22,73;UBERON:0010371,9.80e-14,73;UBERON:0000073,1.78e-13,54;UBERON:0002346,2.35e-12,64;UBERON:0003075,2.35e-12,64;UBERON:0007284,2.35e-12,64;UBERON:0001049,4.66e-12,52;UBERON:0005068,4.66e-12,52;UBERON:0006241,4.66e-12,52;UBERON:0007135,4.66e-12,52;UBERON:0000010,4.29e-11,11;UBERON:0010314,3.17e-10,92;UBERON:0002021,5.75e-10,10;UBERON:0000411,5.75e-10,10;UBERON:0001950,5.75e-10,10;UBERON:0000955,1.70e-09,47;UBERON:0006238,1.70e-09,47;UBERON:0002410,2.50e-09,9;UBERON:0002616,7.64e-09,46;UBERON:0002020,8.34e-09,34;UBERON:0003076,2.12e-07,12;UBERON:0003057,2.12e-07,12;UBERON:0003080,9.82e-07,40
|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,14.3808053048834,7.68436610643109,0.103689612308478,0,0,21.7094748146891,23.1911967999194,0.122490799214954,0.0958454710182364,0,9.91042928994498,17.2377906415003,14.5926206593431,0,0.0914876436024097,0,22.3346399201105,5.06486349028512,16.9606055032259,6.77645746589436,5.83723891276322,0.372798891650601,2.57469057332826,26.5256175974817,0,0,0,0,0,0,0.561777680527007,0,0,0,20.9856695467254,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.29688427812965,1.21439728736295,1.21786191324856,2.53677046981664,1.20578112442098,1.29347577849275,0.502666365318702,0,0.289198713839823,0,1.45590164952668,1.10420759230197,0.969750506270444,0,12.296793474485,16.127396424636,0,0,0,0,29.2091746839404,25.1625331550245,0.251308704225729,11.4724051326902,12.0186264945255,36.5706958424826,33.0972176658226,0.203678727700633,0.124406970610093,0,0.841767423545896,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.896796041993948,1.40552586839593,6.98499100995342,0,0,1.05570674498369,1.09597866213787,1.39023624612799,2.43776516565517,1.23469281844766,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.56748166682099,0.438599962275997,0.219550115291051,0.134206418760372,15.3511662451813,0.205809224758569,0,0,0.213288250535234,0,0.515469845288373,0.605050573870028,0.889512175379481,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.596869416123452,0.58489226135736,0,0,0,0,0.456994050438915,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0,48.3257275863254,54.1517992055979,0,2.01976741763498,2.52406575533005,1.95219372148319,20.2497993868831,14.5770966751057,35.4249891791007,27.4584234865167,4.45291771842384,3.79932615284705,9.48690667071656,9.96096080907602,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0,0,0,0.885905678642318,1.22974059177571,1.55056975900933,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.857348140126369,0.177340233642274,0.535106452806212,0.822745103010605,3.04464949114599,0,0,0.661585194164886,0.49465875882444,0.968786560175433,1.20625849856312,1.43246812803764,2.29797259643086,0,62.8591773815628,0,0,0.185194527369712,0,0,0,0,0,0,0,0,2.43983360552218,1.29606408986162,0.627264888043406,1.52853794622324,0.809186078308924,1.81837602595739,1.04702376793612,0.777689839750757,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0.295379054349154,0,0.0762068066549998,0,0.292373642219257,0,0,1.81384306892169,0,0,0,0.965947970160952,0,0,1.50057865355346,0,6.7770221114048,11.0478056761722,12.0308057822273,8.59265911718438,8.22099023724771,6.7985450765073,11.4753825039407,4.05289082901798,5.43770890781046,7.7664046762773,0.103787347584177,0.399024873401031,0.682934423016537,0.729320151204882,0,0.367687016900028,1.33348036680969,0.824140228955577,1.92551525755089,0.505394423527595,1.01391719956096,0.754505365544305,0.749132059759059,1.40855335290712,1.14870937911227,0.476293691283074,0.927074607558844,0.77163688185482,0.824171801606613,1.17759136107518,0.342869252385415,1.24233064311536,0.476872379894642,1.0174249164263,0.941093804153306,0.761531471025089,1.28049581010941,0.789209134313529,0.950628796921032,1.12228454331548,0.949080144993393,1.37906275325789,1.22769312950907,0.77468420592983,0.578719832943424,0.999242311751784,1.87145286756327,1.71896843238639,2.86932498103265,5.29419405886837,4.86922454802885
|short_description=p1@Plxnb3
}}

Revision as of 20:04, 14 September 2013

Short description:p1@Plxnb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plxnb3_5end
Coexpression cluster:MCL_coexpression_mm9:786
Association with transcript: 0bp_to_ENSMUST00000002079, ENSMUST00000146812, ENSMUST00000147127, ENSMUST00000149478, NM_019587_5end
EntrezGene:Plxnb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plxnb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.19
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D92.57
Mouse Schwann, donor2.CNhs12573.11746-123F926.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I216.13
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A429.21
corpus striatum, adult.CNhs10487.19-21D825.16
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F236.57
diencephalon, neonate N30.CNhs11201.1388-42B233.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C248.33
medulla oblongata, neonate N30.CNhs11200.1396-42A354.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D835.42
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C962.86
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.46e-1044
neurectodermal cell3.46e-1044
neural cell1.99e-0943
autonomic neuron2.50e-099
neuron3.06e-0933
neuronal stem cell3.06e-0933
neuroblast3.06e-0933
electrically signaling cell3.06e-0933
electrically responsive cell6.98e-0739
electrically active cell6.98e-0739







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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