FFCP PHASE1:Mm9::chrX:71167178..71167255,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56292,171207|HGNC=|MCL_coexpression_id=155|UniProt=B1AUY9,B1AUY8|association_with_transcript=0bp_to_ENSMUST00000114387,ENSMUST00000114391,ENSMUST00000128329,ENSMUST00000143076,ENSMUST00000149591,ENSMUST00000153929_5end|description=CAGE_peak_1_at_Arhgap4_5end,CAGE_peak_1_at_Naa10_5end|id=chrX:71167178..71167255,-|ontology_enrichment_celltype=CL:0000219!7.50e-08!54;CL:0002320!8.73e-07!46;CL:0000134!8.73e-07!46|ontology_enrichment_celltype_v019_2=CL:0000219,7.50e-08,54;CL:0002320,8.73e-07,46;CL:0000134,8.73e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000949!2.28e-07!72;UBERON:0001007!2.99e-07!128;UBERON:0001555!2.99e-07!128;UBERON:0007026!2.99e-07!128;UBERON:0004921!7.97e-07!126;UBERON:0004185!7.97e-07!126;UBERON:0002384!8.73e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0000949,2.28e-07,72;UBERON:0002384,8.73e-07,46|phase1_expression=57.3332872635162,24.4282785347553,20.0199665331396,10.2837831844322,16.0286633582831,49.3565059420956,59.3376107112635,72.9546777444906,44.348447477775,54.7710991593465,77.2193036697027,96.524312384357,68.6514927024135,76.5802725190417,53.9637814141374,52.4410942539649,46.8706458345858,48.2657112998104,43.053932152202,46.6828616977833,27.2988961384934,97.2058412256667,82.0167337896257,61.4370903526682,63.7757801366733,32.7312219545562,55.5682975045206,62.4866574789078,68.9785012626637,66.2839241268618,93.3485449858833,147.962146916094,154.381261683727,190.178017218526,144.714661495389,149.112476886568,137.814315477099,37.6678467663217,53.9121387721422,29.8408534065065,27.0586484494267,31.4200923080885,26.2175590636823,46.455925832988,46.8361422234157,43.6841270144802,83.7158738452402,72.3843519183082,49.4293911152562,36.5528210259653,75.5926676776958,63.2511283205875,33.0531733933741,41.3456420946466,42.3478186919505,29.5848351441339,25.2149427146106,18.0485232297105,45.1165707716903,48.138179113755,46.2696924559511,85.7276666134904,73.8114680772246,38.6956878431002,38.565788140112,34.8135256323589,61.1184225457546,56.8643091875901,51.5337373173134,56.0274644076516,55.3154648354135,59.1297537715873,51.2415015007743,47.1589576977573,47.3476626830088,43.203282970671,31.9336054898227,26.6866536598042,27.8027825193801,44.3137926773451,47.6650623168554,42.7148963856543,43.5525478442154,41.0816705323126,32.0876320331301,46.5513165048395,45.1318228133156,49.2094536978794,48.4647637332378,54.4870948369924,26.3776684718527,70.5547579124737,42.8381940235883,66.3834925714515,63.6780889098716,47.9388769194149,50.4195468272989,75.3302025795015,86.7685255373582,71.0212544765784,53.9430297744686,21.815501160434,7.64415719119937,7.11066703153331,57.1536348269605,44.8446961890925,47.5192978313896,37.2239447884135,31.3314839213078,42.8997781897344,82.9259861942129,75.2029731430989,65.7254167179767,55.7673770044703,30.5730638552832,40.8416421821445,7.91023896749996,50.754374278889,36.2690326299448,30.5739346400603,38.6472657305689,41.6992717696291,48.4618579167118,30.7419836862124,21.5730108017859,51.3468680969269,140.423325920939,130.178892625569,146.130761134024,31.3062436356079,26.0775343606617,32.7957859014576,25.8998237086492,20.9686675010871,38.6485762880782,25.9586020908412,39.2081550823718,41.427521213161,52.819056512638,31.3558365270846,63.1084148369113,62.9931766147716,54.1987010714101,44.7593308972074,31.5689356062161,38.3060023651701,35.1381467098983,27.6812606690747,77.6044774558232,49.7348990841365,57.0081642291194,68.1698727849758,58.9460168358268,55.3720944770245,47.7414556466429,54.1373205746301,148.869195710406,142.313392634437,116.791198251589,41.2180287345649,45.2635295763516,35.6522881692809,27.4623893278844,29.5146347621106,31.1619568032504,34.8800917125612,29.2418007525585,21.2512923108248,35.8740472811387,29.7143109983162,37.7780652483688,41.374596441369,45.8859740958296,36.5041459028211,39.5345103300559,40.6473218898173,20.4859645449955,52.8901133327089,74.8641759378671,62.0071913867371,60.9543092053501,59.6983232885094,68.0476814165303,62.9646822432571,37.9623249235609,51.3860738738914,42.9783207048461,44.1683367931355,43.4769914275638,43.1433316154026,55.9797549175458,41.0231022903996,80.6088579050597,55.9817711787671,54.0997131230786,55.8004638296161,53.9187914326,35.8394039639528,33.5153646758564,38.5262486226762,35.6387112199921,38.2531208157582,72.0379883821772,70.90916992934,82.1616599573189,75.328807648926,63.9009382373784,62.9472386953808,68.7489799809833,44.3052051674248,34.3726680763075,51.6175456793593,28.7536413054709,40.5633632958669,43.997311909153,53.0415643688935,69.9649912735457,48.2443521363367,31.0385359479896,86.9765580026525,58.9933214720134,63.9938973372459,49.989022885451,43.0491081625466,37.1348079782181,20.8793003207845,31.6846639653444,25.4684393096091,23.9182152986231,29.9869865929801,26.7661721892138,21.5527097286452,19.6028669121054,18.4927932498361,39.8329061145419,51.3242348126802,31.1468144576316,28.7168632150898,82.1314076337144,56.0485458393708,42.9091178406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| ||
|EntrezGene=56292,171207 | |||
|HGNC= | |||
|MCL_coexpression_id=155 | |||
|UniProt=B1AUY9,B1AUY8 | |||
|association_with_transcript=0bp_to_ENSMUST00000114387,ENSMUST00000114391,ENSMUST00000128329,ENSMUST00000143076,ENSMUST00000149591,ENSMUST00000153929_5end | |||
|description=CAGE_peak_1_at_Arhgap4_5end,CAGE_peak_1_at_Naa10_5end | |||
|id=chrX:71167178..71167255,- | |||
|ontology_enrichment_celltype=CL:0000219!7.50e-08!54;CL:0002320!8.73e-07!46;CL:0000134!8.73e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,7.50e-08,54;CL:0002320,8.73e-07,46;CL:0000134,8.73e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000949!2.28e-07!72;UBERON:0001007!2.99e-07!128;UBERON:0001555!2.99e-07!128;UBERON:0007026!2.99e-07!128;UBERON:0004921!7.97e-07!126;UBERON:0004185!7.97e-07!126;UBERON:0002384!8.73e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000949,2.28e-07,72;UBERON:0002384,8.73e-07,46 | |||
|phase1_expression=57.3332872635162,24.4282785347553,20.0199665331396,10.2837831844322,16.0286633582831,49.3565059420956,59.3376107112635,72.9546777444906,44.348447477775,54.7710991593465,77.2193036697027,96.524312384357,68.6514927024135,76.5802725190417,53.9637814141374,52.4410942539649,46.8706458345858,48.2657112998104,43.053932152202,46.6828616977833,27.2988961384934,97.2058412256667,82.0167337896257,61.4370903526682,63.7757801366733,32.7312219545562,55.5682975045206,62.4866574789078,68.9785012626637,66.2839241268618,93.3485449858833,147.962146916094,154.381261683727,190.178017218526,144.714661495389,149.112476886568,137.814315477099,37.6678467663217,53.9121387721422,29.8408534065065,27.0586484494267,31.4200923080885,26.2175590636823,46.455925832988,46.8361422234157,43.6841270144802,83.7158738452402,72.3843519183082,49.4293911152562,36.5528210259653,75.5926676776958,63.2511283205875,33.0531733933741,41.3456420946466,42.3478186919505,29.5848351441339,25.2149427146106,18.0485232297105,45.1165707716903,48.138179113755,46.2696924559511,85.7276666134904,73.8114680772246,38.6956878431002,38.565788140112,34.8135256323589,61.1184225457546,56.8643091875901,51.5337373173134,56.0274644076516,55.3154648354135,59.1297537715873,51.2415015007743,47.1589576977573,47.3476626830088,43.203282970671,31.9336054898227,26.6866536598042,27.8027825193801,44.3137926773451,47.6650623168554,42.7148963856543,43.5525478442154,41.0816705323126,32.0876320331301,46.5513165048395,45.1318228133156,49.2094536978794,48.4647637332378,54.4870948369924,26.3776684718527,70.5547579124737,42.8381940235883,66.3834925714515,63.6780889098716,47.9388769194149,50.4195468272989,75.3302025795015,86.7685255373582,71.0212544765784,53.9430297744686,21.815501160434,7.64415719119937,7.11066703153331,57.1536348269605,44.8446961890925,47.5192978313896,37.2239447884135,31.3314839213078,42.8997781897344,82.9259861942129,75.2029731430989,65.7254167179767,55.7673770044703,30.5730638552832,40.8416421821445,7.91023896749996,50.754374278889,36.2690326299448,30.5739346400603,38.6472657305689,41.6992717696291,48.4618579167118,30.7419836862124,21.5730108017859,51.3468680969269,140.423325920939,130.178892625569,146.130761134024,31.3062436356079,26.0775343606617,32.7957859014576,25.8998237086492,20.9686675010871,38.6485762880782,25.9586020908412,39.2081550823718,41.427521213161,52.819056512638,31.3558365270846,63.1084148369113,62.9931766147716,54.1987010714101,44.7593308972074,31.5689356062161,38.3060023651701,35.1381467098983,27.6812606690747,77.6044774558232,49.7348990841365,57.0081642291194,68.1698727849758,58.9460168358268,55.3720944770245,47.7414556466429,54.1373205746301,148.869195710406,142.313392634437,116.791198251589,41.2180287345649,45.2635295763516,35.6522881692809,27.4623893278844,29.5146347621106,31.1619568032504,34.8800917125612,29.2418007525585,21.2512923108248,35.8740472811387,29.7143109983162,37.7780652483688,41.374596441369,45.8859740958296,36.5041459028211,39.5345103300559,40.6473218898173,20.4859645449955,52.8901133327089,74.8641759378671,62.0071913867371,60.9543092053501,59.6983232885094,68.0476814165303,62.9646822432571,37.9623249235609,51.3860738738914,42.9783207048461,44.1683367931355,43.4769914275638,43.1433316154026,55.9797549175458,41.0231022903996,80.6088579050597,55.9817711787671,54.0997131230786,55.8004638296161,53.9187914326,35.8394039639528,33.5153646758564,38.5262486226762,35.6387112199921,38.2531208157582,72.0379883821772,70.90916992934,82.1616599573189,75.328807648926,63.9009382373784,62.9472386953808,68.7489799809833,44.3052051674248,34.3726680763075,51.6175456793593,28.7536413054709,40.5633632958669,43.997311909153,53.0415643688935,69.9649912735457,48.2443521363367,31.0385359479896,86.9765580026525,58.9933214720134,63.9938973372459,49.989022885451,43.0491081625466,37.1348079782181,20.8793003207845,31.6846639653444,25.4684393096091,23.9182152986231,29.9869865929801,26.7661721892138,21.5527097286452,19.6028669121054,18.4927932498361,39.8329061145419,51.3242348126802,31.1468144576316,28.7168632150898,82.1314076337144,56.0485458393708,42.9091178406109,37.0916807081807,36.8374010123086,27.9593493604486,29.6322236529584,24.9107347094173,31.9800454323167,34.7784470914461,27.6701444562566,28.276275845119,39.1754635174821,54.3100091185128,40.0701920009797,37.283247791793,80.9745343873773,82.7881969288487,84.952919507095,77.5166877796741,74.7113788988355,67.3282973997201,32.8203932323641,47.6229185615532,50.9791251090152,71.4243072934944,74.8472120882491,76.3203020036583,32.0013229408561,65.002054945303,73.8638084399528,59.1570216687195,47.5271826161293,42.8085162244969,38.0108237590899,49.9322516547943,33.7927259611743,15.4637411730589,44.7672648051573,34.6261131177108,44.5641817680699,48.1297140926684,59.6861720015682,52.1968061189295,54.2154356131522,26.1449675834819,55.7039071401,52.2158775946953,45.5578537329491,49.7292726492384,47.9796739300798,44.6117437752719,98.5874893964361,95.4468904847348,95.0815819774436,60.1442489349522,66.7468946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| |||
|short_description=p1@Arhgap4,p1@Naa10 | |||
}} | |||
Revision as of 20:05, 14 September 2013
| Short description: | p1@Arhgap4, p1@Naa10 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Arhgap4_5end, CAGE_peak_1_at_Naa10_5end |
| Coexpression cluster: | MCL_coexpression_mm9:155 |
| Association with transcript: | 0bp_to_ENSMUST00000114387, ENSMUST00000114391, ENSMUST00000128329, ENSMUST00000143076, ENSMUST00000149591, ENSMUST00000153929_5end |
| EntrezGene: | 56292,171207 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 7.50e-08 | 54 |
| connective tissue cell | 8.73e-07 | 46 |
| mesenchymal cell | 8.73e-07 | 46 |
| Ontology term | p-value | n |
|---|---|---|
| endocrine system | 2.28e-07 | 72 |
| connective tissue | 8.73e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
