Personal tools

MCL coexpression mm9:1262: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.00716152415259905,0.914026096033529,0.900042609085841,0.784334817520911,0.862801219676613,0.740256440222263,0.680304606765466,-0.383679920861558,-0.305063607452322,-0.278944177763586,-0.460212082121093,-0.444681711491826,-0.371700201560301,-0.350000913014471,-0.235811843643312,-0.298786692953997,-0.292866015839729,-0.331668130331267,-0.301480378255063,-0.314664928340788,0.205025411153994,-0.155701318062605,-0.220020692240563,0.717190303269987,0.734954324063741,0.764183111754593,0.792804788359235,0.757270157733699,0.665384011926445,0.63523522676649,0.621823812000694,-0.346518466607764,-0.311848529234325,-0.207795567054509,0.377980493028441,0.3654249247892,0.433091698473147,-0.210445952770617,-0.302688550929958,-0.286996552203614,-0.249390658911861,-0.247365138407137,-0.311556147542969,-0.0958662818612314,-0.113049479839669,-0.10279113575159,-0.0462555228490027,-0.20466853629588,-0.0971197606088417,-0.0893877337412401,-0.14355642425479,-0.153722934389675,-0.423043691129146,-0.26795794726671,-0.359420569980665,0.063233854348636,-0.0263716738915067,0.138907658002555,-0.0787372096854474,-0.123307046311984,-0.0729073216426802,-0.0949424220469712,-0.150512463482103,-0.112696436799444,-0.124766393335872,-0.140659680583895,-0.110146110207784,-0.0746894846061541,-0.213486632970143,-0.167483864829036,-0.201654543569083,-0.21182402527764,-0.177701636833576,-0.21708325804802,-0.210004978608775,-0.213030775866586,-0.12410644073362,-0.0746324063015164,-0.101738396596158,-0.103357427928427,-0.111653221948749,-0.110483619422582,-0.126517868661099,-0.178433249544618,-0.187968006839898,-0.218052317279968,-0.227039378815392,-0.145780133251575,-0.250604425853461,-0.170602536112584,0.427938750023827,0.233923352852482,0.252586867905842,0.295974141946325,0.305934443873881,0.309251265201242,0.273871902938239,-0.29728897422253,-0.3457755559934,-0.355950984088453,0.0780642600037074,-0.252288374821035,-0.270546246539812,-0.215382554841073,0.634687191506974,0.554886596769372,0.522300403851259,0.324018143744122,-0.140746517654264,-0.112674777867106,-0.111157790635725,-0.0968327732836207,-0.0727492750207274,-0.124916365675078,-0.0752237507079505,-0.0764679065257295,0.52833171922482,-0.00165926045921433,-0.189849774951322,-0.106869602908495,-0.160365544755564,-0.106889184617307,0.712392465295632,-0.0497213349465562,-0.0257707162203782,0.658373247834387,-0.253952751959377,-0.34976162743637,-0.302156671925001,-0.139887009140567,-0.13603237528666,-0.190154870486737,-0.187079052336577,-0.140731720569617,-0.0882996860004839,-0.129309098914901,0.0423315825321207,-0.00486299231318806,0.161237297331713,0.392618717013698,-0.130612956679521,-0.162541485787147,-0.0224955331073398,0.16122608510044,0.0446201152399381,-0.0507424419778201,-0.0133403946395462,0.345789466903387,-0.148304540335943,-0.032718612451806,-0.0508777668617743,0.100334970273284,0.504597869873182,0.775505465805971,0.796440425202268,-0.0806602649517228,-0.323427509411602,-0.368030208303576,-0.306266846040546,0.139859887251055,0.14016230488471,0.17763494515095,0.203835479830198,0.266376307364104,0.264245101367565,0.238110553057985,0.30112402968807,0.335326235376099,0.343086882063225,0.355661356833869,0.536907315326088,0.507586455499676,0.443601192952385,0.497299753026614,-0.176786057336504,-0.147126643162771,0.749484515246455,0.532946243634036,-0.0846634755050431,0.0397935372611342,0.227189515722557,0.295139314518828,0.360386992237911,0.390018097531044,0.579992238777398,0.451218380068985,0.472832730537711,0.503367760037448,0.472104844506887,0.537335133195905,0.612046836941507,0.659776505756241,-0.0285177592695801,0.0485045166173848,0.0597333518914126,0.156592953929222,0.112252199818767,0.222658675448552,0.298544618065426,0.288590355055135,0.211463610307014,0.284297469300063,0.265967393722151,-0.107432745721401,-0.189829877267731,-0.147641035615408,-0.138247498075143,-0.0514922394008672,0.00560255529711188,0.12331532936527,0.0205309354108839,0.0640520845717273,0.227334378132259,0.214089822874466,0.255375928662635,0.25285819787308,0.298926436256971,0.270174992156258,0.55035539509181,-0.0224001701651172,0.095260933861706,0.175094263400366,0.263099440827642,0.367378035267265,0.469356235749472,0.529843259272478,0.386372360384067,0.38192695148359,0.461088867213696,0.551356104939771,0.453697312540536,0.490587915206454,-0.460212082121093,-0.336890340079106,0.384564086098865,0.263853299436633,-0.0789231265035362,-0.0907330444369468,-0.206645587011865,-0.0439471346360376,-0.164235120519115,-0.176768266025257,-0.222635587498503,-0.249233395488142,-0.21939248344338,-0.212734336135916,-0.161848649614838,-0.161731245910303,-0.150795485600134,-0.0202823874905363,0.140158379985393,-0.0172231975413003,0.102803853375671,0.215661887264808,0.276259576984808,0.0821333336443157,0.106673797514179,0.183414256594467,0.21713808495713,0.232014908800245,0.383340914693842,0.151756582093967,0.0590875704568563,0.28764361600556,0.302741699224492,0.316366880433991,0.0652457553442279,-0.0816856067605679,0.0108196190601255,-0.0298668390412776,-0.0247133158924192,0.00972270617193568,-0.040447640578117,0.0347759325183716,0.543785229393731,0.539889513677656,0.450798538125209,1.16116491834547,0.827803042809902,0.866916112856457,1.05319356293759,1.07780262509676,0.534799109657133,-0.131694479418721,-0.126690106987328,0.0636778476604756,-0.110287034862026,-0.157662323238125,-0.221093182130914,-0.147365323923562,-0.172111101203421,-0.17432246666032,-0.129470933127827,0.732239722502877,0.0112762889436823,0.300083811221016,0.508179437638855,0.735278627596237,0.756404691315875,0.706299970565692,0.752382499931323,0.819033607522066,0.617857282016484,0.654486474495626,-0.235105076630824,-0.04049308432285,-0.0905417369509574,-0.0851829384961045,-0.159082559552632,-0.0957337159213293,-0.0904445727736962,-0.0846381520195773,-0.16296306690046,-0.278328431062579,-0.152288193380055,0.120593326105231,0.186312514742065,0.17958497238889,0.0995644501093729,0.0299318644764992,0.0660569163520669,0.112530360150534,0.0637261350466441,0.0583209802673611,0.0641088395058462,0.0173591937426192,0.0811334735848837,0.00346959035100917,0.0232878006752056,1.18536855983483,0.408595493639538,0.406579516008844,0.484323921654439,0.422941689931172,0.204889472249703,0.566046877677153,1.44048448061597,0.283582696460641,-0.195630996562861,-0.216280081436712,-0.223808085409524,-0.17084951682974,-0.24521660360507,-0.155870239865025,-0.224450502902991,-0.127175236945023,-0.196292632379111,-0.191751758219624,-0.149390377524077,-0.0659498049032263,-0.0644687086484124,0.264245545045146,0.0321156937035594,0.261532862740581,0.240318374286093,0.205786990409176,0.19081403884333,0.183609138090717,0.196648126497303,0.216873181919508,0.255305241115098,0.252310204659036,0.255744096649098,0.225153818443171,0.2260295685151,0.183950662764058,0.28603697591514,0.232223458442168,0.263398760782513,0.235971762866461,0.219037539623061,0.247942424612646,0.274841604727903,0.187784197243881,0.31100406277218,0.212898258015687,0.222000333455746,0.257270693083712,0.284926866430723,0.264077233839061,0.217838341788109,0.243094426472151,0.479880945570981,0.539227675022224,0.468690086360634,0.504920680277644,0.248201579660433,0.375557108892339,-0.0314067249584216|coexpression_dpi_cluster_scores_median=-0.0198268518530237,0.920585828438166,0.922752461530118,0.804485126926918,0.908385664425124,0.746778530241298,0.623857883990087,-0.217950678491984,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.212517521008318,-0.191697647861394,-0.240137415382933,0.119600166652134,-0.155521526711251,-0.240137415382933,0.701191970745046,0.677220792808682,0.742335516936393,0.776395576327875,0.736725153252418,0.711936128134013,0.73176791225019,0.642151389658586,-0.240137415382933,-0.240137415382933,-0.227356618284766,0.496095161831794,0.423419438643149,0.382881232663313,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.175334842386598,-0.175334842386598,-0.240137415382933,-0.137617842644005,-0.141545353997321,-0.132830373932042,-0.129324140186858,-0.217975526008878,-0.0919725134184687,-0.129324140186858,-0.142376308401711,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.0776986795398701,-0.0549010220858722,0.131450661993713,-0.0881125515819026,-0.175334842386598,-0.0952997500553407,-0.138538295074745,-0.175334842386598,-0.175334842386598,-0.175334842386598,-0.175334842386598,-0.129324140186858,-0.075902329194989,-0.175334842386598,-0.187302984648618,-0.175334842386598,-0.18975982433978,-0.175334842386598,-0.219229972743627,-0.220262756837789,-0.240137415382933,-0.175334842386598,-0.0671781963465788,-0.118151432155133,-0.151068906341518,-0.175334842386598,-0.129324140186858,-0.148437030305588,-0.175334842386598,-0.1864168798403,-0.240137415382933,-0.240137415382933,-0.164787902116234,-0.171742138176584,-0.175334842386598,0.404583215629433,0.180415934839945,0.112106508629704,0.248408113281217,0.199445338769371,0.201308353336487,0.233508720501727,-0.175334842386598,-0.194172978028544,-0.178617976839354,-0.0162214477426912,-0.240137415382933,-0.240137415382933,-0.240137415382933,0.572525718573479,0.485945258042863,0.453951370769885,0.232482911856434,-0.129324140186858,-0.0692150207758583,-0.140596010606484,-0.0941856497532625,-0.101978537391335,-0.167234088416318,-0.0926846177176406,-0.0743691769046451,0.402400646590239,-0.024551191615151,-0.175334842386598,-0.11171078108007,-0.15857372450663,-0.175334842386598,0.642258977003258,-0.146140923465252,-0.125928483317172,0.710891633883785,-0.193491332785725,-0.240137415382933,-0.240137415382933,-0.175334842386598,-0.157252321063203,-0.20013705598172,-0.209519816026876,-0.175334842386598,-0.126641911701263,-0.162795768319376,0.0636014477111035,-5.0588454492349e-05,0.141549954152652,0.338601943689909,-0.0801664428717428,-0.19520214307638,-0.0643876359006902,0.132491304844176,0.0398373867159628,-0.0593171878596141,-0.0217393551154453,0.258832069241384,-0.175334842386598,-0.0099306099408814,-0.0746678953065383,0.0901266774511424,0.448626745604023,0.752684005772194,0.811900187704007,-0.0853004777632387,-0.240137415382933,-0.240137415382933,-0.240137415382933,0.0637444806365524,0.0892300250870512,0.113223990184959,0.227056367451181,0.178121086355448,0.185987063776396,0.187547046071879,0.303681181560299,0.284236188183268,0.247944460726776,0.326113680572283,0.396801165460276,0.497453899306835,0.301446625637166,0.387267632133966,-0.161431941189861,-0.165680471227215,0.806781599209025,0.530911478438324,-0.124755836728141,-0.0386300107581644,0.130608221992949,0.188293483360658,0.288337244805419,0.304683897503011,0.515720982415206,0.372152042611556,0.442181261064378,0.444907676256208,0.381180126504746,0.566471867065386,0.621294149942634,0.739721357947007,-0.0296911669233193,0.0505263665458092,-0.0203554172495935,0.119457745055927,0.0466943579572459,0.14862881795967,0.15326117779605,0.150739838931044,0.0603081543317025,0.182409983291868,0.282972000049241,-0.0537051271300292,-0.162936311735049,-0.105420546699343,-0.0892165767418503,-0.0102083448848794,0.0445650643405942,0.0319077184255381,-0.0640674744171904,-0.0239633739271783,-0.0048221344303605,0.158872239325447,0.218277172326552,0.25227259056144,0.224760158285396,0.174674359821242,0.504560430623549,-0.0218640564736512,-0.0284054027504019,0.156623272124193,0.231722560461129,0.358826849071854,0.488681114939715,0.511720813088214,0.434318278027052,0.444943524782936,0.42664942315475,0.533282803433681,0.45923275701501,0.460197667210777,-0.240137415382933,-0.175334842386598,0.427299666022287,0.196735275849094,-0.103568744219176,-0.117507360026028,-0.211357013977445,-0.113143509364275,-0.175334842386598,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.1435931367864,-0.175334842386598,-0.146693384210405,-0.140434701637182,0.00613437409871199,0.114158909261812,-0.0730789176417773,0.148085215279635,0.177845476264964,0.221264583164276,0.00268313438675545,0.0120062030426716,0.133090725187906,0.0957550125596351,0.116655880803817,0.317139585118335,0.029157873720627,-0.054864121349282,0.192934941235588,0.270698300777922,0.316480647540455,0.0280547862721368,-0.0815486398691048,0.0339892002425856,0.0361165096807075,-0.0145146059381631,-0.0109398566008345,-0.0077569261395522,0.0571470675541463,0.383978664518621,0.517593565090744,0.372704996935639,1.08657167584142,0.926556806273809,0.831720967769939,0.965993948563245,1.00538739504271,0.580800164567107,-0.114059280266138,-0.175334842386598,0.0632227951055158,-0.10177274195192,-0.175334842386598,-0.191840913572451,-0.175334842386598,-0.169071606938007,-0.14831485736199,-0.122402602583398,0.599887123448222,-0.063568118992255,0.270067573972014,0.388933673611529,0.591750264531017,0.588922689640916,0.609287854963744,0.660279622820615,0.712360073802192,0.662426097200418,0.595724930701997,-0.240137415382933,0.006929229461651,-0.0950699822825386,-0.0671280384441624,-0.171658747645425,-0.108681758013683,-0.0900490973583706,-0.077924908538822,-0.159090733376814,-0.193149340601192,-0.142756427107856,0.0839067852626093,0.168479372864245,0.141533504662295,0.0987869022330217,-0.0229286363443702,0.0205491698487861,0.0879396441048117,0.0519794131587637,0.0637577707296392,0.0971243194500538,0.0893752725090167,0.067898696873131,-0.0360437937295593,0.0192343502234256,1.11395189838526,0.207262534424231,0.226411491392869,0.341182242751011,0.320260939004637,0.128132115900737,0.516319831678465,1.33665785958974,0.174051082780672,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.177523596796265,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.175334842386598,-0.240137415382933,-0.175334842386598,-0.130785136292497,-0.0440077981091531,-0.0428852287306459,0.247150997186447,0.0227275181120705,0.166390590631588,0.21836423440359,0.145758048853463,0.1389841764365,0.120988519381056,0.171698459346593,0.0952269929706773,0.169831911942491,0.223235411803346,0.199820431553009,0.136104995018444,0.13890704471775,0.186360799310577,0.215748745080422,0.239393894504259,0.142797834790366,0.148796282226608,0.217409061299879,0.126700440038274,0.272125605105827,0.13616248616725,0.296083672072442,0.186081505011691,0.163939647524799,0.251716359060513,0.302458342432962,0.236630372146254,0.119094643253457,0.168958108537154,0.456492782791374,0.570049847918029,0.491410404133286,0.496632279563482,0.297494686954519,0.281118035844483,-0.0325109564746449|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0004119!1.92e-14!118;UBERON:0000925!1.92e-14!118;UBERON:0006595!1.92e-14!118;UBERON:0001007!1.14e-13!116;UBERON:0001555!1.14e-13!116;UBERON:0007026!1.14e-13!116;UBERON:0000160!9.38e-13!31;UBERON:0004921!1.03e-12!114;UBERON:0005409!1.49e-12!47;UBERON:0000344!1.68e-09!15;UBERON:0001242!2.15e-08!13;UBERON:0000060!2.15e-08!13;UBERON:0001262!2.15e-08!13;UBERON:0004786!2.15e-08!13|tfbs_overrepresentation_for_novel_motifs=0.491922,0.217198,0.464605,0.535892,0.346849,0.550971,0.645383,0.247459,1.31693,2.04718,1.46067,0.632897,0.247704,0.6581,0.364314,0,0.856992,0.338549,0.232269,0.442204,0.426133,1.17476,0.657163,0.345236,0.472505,0.686615,0.223823,0.572827,1.02135,1.0231,0.558142,0.960397,0.892985,0.204204,0.956447,0.0363535,0.326478,0.629145,0.303703,0.752287,0.342638,0.56353,0.327433,0.366415,0.659176,0.524258,0.77511,0.589246,0.594982,0.397446,0.839084,0.714419,0.517905,1.10437,1.12205,0.66551,0.406788,0.619643,0.614918,0.663395,0.939962,0.724164,0.742129,0.827522,0.677043,0.869046,1.2599,1.61148,0.935192,1.46355,1.1311,0.253541,0.11437,1.156,0.599223,0.57254,0.589776,0.763395,0.922432,0.430551,0.254777,0.874787,0.722675,0.676326,1.03903,1.17421,0.0610418,0.181203,0.780154,1.77427,1.33021,1.04409,0.973447,0.35304,1.47187,0.281222,0.244935,0.976308,0.775372,0.160254,0.326561,0.960112,1.08669,0.839694,0.838613,0.563071,0.8998,0.585058,0.435642,0.428007,0.484547,1.0885,0.431734,0.605144,1.33732,0.340765,1.87959,0.53982,0.858327,0.322606,1.16147,0.805995,0.688501,0.762461,1.39185,0.926209,0.65384,0.966541,1.25836,0.356163,1.06946,2.25421,1.2285,0.679647,1.35909,0.106956,0.500709,0.564999,1.30952,2.14327,1.74232,1.26465,0.700956,0.971067,0.831964,0.564002,0.778321,2.10357,0.503174,1.64681,0.540361,0.667976,1.10596,0.783181,0.678689,1.18867,0.71546,0.376898,0.48935,0.500417,1.31911,1.03816,0.926663,0.482185,0.82857,0.671017,0.325308,0.63125,0.895201|tfbs_overrepresentation_jaspar=MA0003.1;1.03722,MA0004.1;0.536396,MA0006.1;0.359699,MA0007.1;0.52077,MA0009.1;0.987341,MA0014.1;1.71935,MA0017.1;0.387481,MA0019.1;0.800946,MA0024.1;0.942716,MA0025.1;1.22395,MA0027.1;2.64231,MA0028.1;0.370592,MA0029.1;0.920529,MA0030.1;0.927235,MA0031.1;0.890871,MA0038.1;0.686534,MA0040.1;1.00009,MA0041.1;0.457338,MA0042.1;0.443591,MA0043.1;1.08567,MA0046.1;1.02391,MA0048.1;0.161427,MA0050.1;0.57678,MA0051.1;0.695779,MA0052.1;1.00829,MA0055.1;0.212634,MA0056.1;0,MA0057.1;0.457693,MA0058.1;0.436487,MA0059.1;0.449345,MA0060.1;0.275911,MA0061.1;0.307097,MA0063.1;0,MA0066.1;0.675169,MA0067.1;1.33603,MA0068.1;0.153907,MA0069.1;1.00864,MA0070.1;0.998765,MA0071.1;0.575909,MA0072.1;0.990133,MA0073.1;0.0960184,MA0074.1;0.638014,MA0076.1;0.407465,MA0077.1;0.968053,MA0078.1;0.729877,MA0081.1;0.473489,MA0083.1;1.08487,MA0084.1;1.66561,MA0087.1;1.04109,MA0088.1;0.358337,MA0089.1;0,MA0090.1;1.25093,MA0091.1;0.55008,MA0092.1;0.501022,MA0093.1;0.379257,MA0095.1;0,MA0098.1;0,MA0100.1;0.626021,MA0101.1;0.458688,MA0103.1;1.03097,MA0105.1;0.199622,MA0106.1;0.737893,MA0107.1;0.392331,MA0108.2;0.824407,MA0109.1;0,MA0111.1;0.515457,MA0113.1;0.708789,MA0114.1;0.304661,MA0115.1;1.08851,MA0116.1;0.944657,MA0117.1;1.05576,MA0119.1;0.459301,MA0122.1;1.07591,MA0124.1;1.28237,MA0125.1;1.20757,MA0130.1;0,MA0131.1;0.796279,MA0132.1;0,MA0133.1;0,MA0135.1;1.1226,MA0136.1;0.658622,MA0139.1;0.243463,MA0140.1;0.625902,MA0141.1;0.419361,MA0142.1;0.876028,MA0143.1;0.725672,MA0144.1;0.307873,MA0145.1;0.761789,MA0146.1;1.41218,MA0147.1;0.320675,MA0148.1;0.553294,MA0149.1;0.464445,MA0062.2;0.204999,MA0035.2;0.630778,MA0039.2;1.39094,MA0138.2;0.788113,MA0002.2;0.246463,MA0137.2;0.416331,MA0104.2;0.261255,MA0047.2;0.685741,MA0112.2;1.24549,MA0065.2;0.763394,MA0150.1;0.520653,MA0151.1;0,MA0152.1;0.685852,MA0153.1;1.13945,MA0154.1;1.49271,MA0155.1;0.822245,MA0156.1;0.406559,MA0157.1;0.843181,MA0158.1;0,MA0159.1;1.58527,MA0160.1;0.556423,MA0161.1;0,MA0162.1;1.53386,MA0163.1;1.4645,MA0164.1;0.658997,MA0080.2;1.01893,MA0018.2;0.669032,MA0099.2;0.781628,MA0079.2;2.41728,MA0102.2;1.7182,MA0258.1;0.290587,MA0259.1;0.309517,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=0.00716152415259905,0.914026096033529,0.900042609085841,0.784334817520911,0.862801219676613,0.740256440222263,0.680304606765466,-0.383679920861558,-0.305063607452322,-0.278944177763586,-0.460212082121093,-0.444681711491826,-0.371700201560301,-0.350000913014471,-0.235811843643312,-0.298786692953997,-0.292866015839729,-0.331668130331267,-0.301480378255063,-0.314664928340788,0.205025411153994,-0.155701318062605,-0.220020692240563,0.717190303269987,0.734954324063741,0.764183111754593,0.792804788359235,0.757270157733699,0.665384011926445,0.63523522676649,0.621823812000694,-0.346518466607764,-0.311848529234325,-0.207795567054509,0.377980493028441,0.3654249247892,0.433091698473147,-0.210445952770617,-0.302688550929958,-0.286996552203614,-0.249390658911861,-0.247365138407137,-0.311556147542969,-0.0958662818612314,-0.113049479839669,-0.10279113575159,-0.0462555228490027,-0.20466853629588,-0.0971197606088417,-0.0893877337412401,-0.14355642425479,-0.153722934389675,-0.423043691129146,-0.26795794726671,-0.359420569980665,0.063233854348636,-0.0263716738915067,0.138907658002555,-0.0787372096854474,-0.123307046311984,-0.0729073216426802,-0.0949424220469712,-0.150512463482103,-0.112696436799444,-0.124766393335872,-0.140659680583895,-0.110146110207784,-0.0746894846061541,-0.213486632970143,-0.167483864829036,-0.201654543569083,-0.21182402527764,-0.177701636833576,-0.21708325804802,-0.210004978608775,-0.213030775866586,-0.12410644073362,-0.0746324063015164,-0.101738396596158,-0.103357427928427,-0.111653221948749,-0.110483619422582,-0.126517868661099,-0.178433249544618,-0.187968006839898,-0.218052317279968,-0.227039378815392,-0.145780133251575,-0.250604425853461,-0.170602536112584,0.427938750023827,0.233923352852482,0.252586867905842,0.295974141946325,0.305934443873881,0.309251265201242,0.273871902938239,-0.29728897422253,-0.3457755559934,-0.355950984088453,0.0780642600037074,-0.252288374821035,-0.270546246539812,-0.215382554841073,0.634687191506974,0.554886596769372,0.522300403851259,0.324018143744122,-0.140746517654264,-0.112674777867106,-0.111157790635725,-0.0968327732836207,-0.0727492750207274,-0.124916365675078,-0.0752237507079505,-0.0764679065257295,0.52833171922482,-0.00165926045921433,-0.189849774951322,-0.106869602908495,-0.160365544755564,-0.106889184617307,0.712392465295632,-0.0497213349465562,-0.0257707162203782,0.658373247834387,-0.253952751959377,-0.34976162743637,-0.302156671925001,-0.139887009140567,-0.13603237528666,-0.190154870486737,-0.187079052336577,-0.140731720569617,-0.0882996860004839,-0.129309098914901,0.0423315825321207,-0.00486299231318806,0.161237297331713,0.392618717013698,-0.130612956679521,-0.162541485787147,-0.0224955331073398,0.16122608510044,0.0446201152399381,-0.0507424419778201,-0.0133403946395462,0.345789466903387,-0.148304540335943,-0.032718612451806,-0.0508777668617743,0.100334970273284,0.504597869873182,0.775505465805971,0.796440425202268,-0.0806602649517228,-0.323427509411602,-0.368030208303576,-0.306266846040546,0.139859887251055,0.14016230488471,0.17763494515095,0.203835479830198,0.266376307364104,0.264245101367565,0.238110553057985,0.30112402968807,0.335326235376099,0.343086882063225,0.355661356833869,0.536907315326088,0.507586455499676,0.443601192952385,0.497299753026614,-0.176786057336504,-0.147126643162771,0.749484515246455,0.532946243634036,-0.0846634755050431,0.0397935372611342,0.227189515722557,0.295139314518828,0.360386992237911,0.390018097531044,0.579992238777398,0.451218380068985,0.472832730537711,0.503367760037448,0.472104844506887,0.537335133195905,0.612046836941507,0.659776505756241,-0.0285177592695801,0.0485045166173848,0.0597333518914126,0.156592953929222,0.112252199818767,0.222658675448552,0.298544618065426,0.288590355055135,0.211463610307014,0.284297469300063,0.265967393722151,-0.107432745721401,-0.189829877267731,-0.147641035615408,-0.138247498075143,-0.0514922394008672,0.00560255529711188,0.12331532936527,0.0205309354108839,0.0640520845717273,0.227334378132259,0.214089822874466,0.255375928662635,0.25285819787308,0.298926436256971,0.270174992156258,0.55035539509181,-0.0224001701651172,0.095260933861706,0.175094263400366,0.263099440827642,0.367378035267265,0.469356235749472,0.529843259272478,0.386372360384067,0.38192695148359,0.461088867213696,0.551356104939771,0.453697312540536,0.490587915206454,-0.460212082121093,-0.336890340079106,0.384564086098865,0.263853299436633,-0.0789231265035362,-0.0907330444369468,-0.206645587011865,-0.0439471346360376,-0.164235120519115,-0.176768266025257,-0.222635587498503,-0.249233395488142,-0.21939248344338,-0.212734336135916,-0.161848649614838,-0.161731245910303,-0.150795485600134,-0.0202823874905363,0.140158379985393,-0.0172231975413003,0.102803853375671,0.215661887264808,0.276259576984808,0.0821333336443157,0.106673797514179,0.183414256594467,0.21713808495713,0.232014908800245,0.383340914693842,0.151756582093967,0.0590875704568563,0.28764361600556,0.302741699224492,0.316366880433991,0.0652457553442279,-0.0816856067605679,0.0108196190601255,-0.0298668390412776,-0.0247133158924192,0.00972270617193568,-0.040447640578117,0.0347759325183716,0.543785229393731,0.539889513677656,0.450798538125209,1.16116491834547,0.827803042809902,0.866916112856457,1.05319356293759,1.07780262509676,0.534799109657133,-0.131694479418721,-0.126690106987328,0.0636778476604756,-0.110287034862026,-0.157662323238125,-0.221093182130914,-0.147365323923562,-0.172111101203421,-0.17432246666032,-0.129470933127827,0.732239722502877,0.0112762889436823,0.300083811221016,0.508179437638855,0.735278627596237,0.756404691315875,0.706299970565692,0.752382499931323,0.819033607522066,0.617857282016484,0.654486474495626,-0.235105076630824,-0.04049308432285,-0.0905417369509574,-0.0851829384961045,-0.159082559552632,-0.0957337159213293,-0.0904445727736962,-0.0846381520195773,-0.16296306690046,-0.278328431062579,-0.152288193380055,0.120593326105231,0.186312514742065,0.17958497238889,0.0995644501093729,0.0299318644764992,0.0660569163520669,0.112530360150534,0.0637261350466441,0.0583209802673611,0.0641088395058462,0.0173591937426192,0.0811334735848837,0.00346959035100917,0.0232878006752056,1.18536855983483,0.408595493639538,0.406579516008844,0.484323921654439,0.422941689931172,0.204889472249703,0.566046877677153,1.44048448061597,0.283582696460641,-0.195630996562861,-0.216280081436712,-0.223808085409524,-0.17084951682974,-0.24521660360507,-0.155870239865025,-0.224450502902991,-0.127175236945023,-0.196292632379111,-0.191751758219624,-0.149390377524077,-0.0659498049032263,-0.0644687086484124,0.264245545045146,0.0321156937035594,0.261532862740581,0.240318374286093,0.205786990409176,0.19081403884333,0.183609138090717,0.196648126497303,0.216873181919508,0.255305241115098,0.252310204659036,0.255744096649098,0.225153818443171,0.2260295685151,0.183950662764058,0.28603697591514,0.232223458442168,0.263398760782513,0.235971762866461,0.219037539623061,0.247942424612646,0.274841604727903,0.187784197243881,0.31100406277218,0.212898258015687,0.222000333455746,0.257270693083712,0.284926866430723,0.264077233839061,0.217838341788109,0.243094426472151,0.479880945570981,0.539227675022224,0.468690086360634,0.504920680277644,0.248201579660433,0.375557108892339,-0.0314067249584216
|coexpression_dpi_cluster_scores_median=-0.0198268518530237,0.920585828438166,0.922752461530118,0.804485126926918,0.908385664425124,0.746778530241298,0.623857883990087,-0.217950678491984,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.212517521008318,-0.191697647861394,-0.240137415382933,0.119600166652134,-0.155521526711251,-0.240137415382933,0.701191970745046,0.677220792808682,0.742335516936393,0.776395576327875,0.736725153252418,0.711936128134013,0.73176791225019,0.642151389658586,-0.240137415382933,-0.240137415382933,-0.227356618284766,0.496095161831794,0.423419438643149,0.382881232663313,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.175334842386598,-0.175334842386598,-0.240137415382933,-0.137617842644005,-0.141545353997321,-0.132830373932042,-0.129324140186858,-0.217975526008878,-0.0919725134184687,-0.129324140186858,-0.142376308401711,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.0776986795398701,-0.0549010220858722,0.131450661993713,-0.0881125515819026,-0.175334842386598,-0.0952997500553407,-0.138538295074745,-0.175334842386598,-0.175334842386598,-0.175334842386598,-0.175334842386598,-0.129324140186858,-0.075902329194989,-0.175334842386598,-0.187302984648618,-0.175334842386598,-0.18975982433978,-0.175334842386598,-0.219229972743627,-0.220262756837789,-0.240137415382933,-0.175334842386598,-0.0671781963465788,-0.118151432155133,-0.151068906341518,-0.175334842386598,-0.129324140186858,-0.148437030305588,-0.175334842386598,-0.1864168798403,-0.240137415382933,-0.240137415382933,-0.164787902116234,-0.171742138176584,-0.175334842386598,0.404583215629433,0.180415934839945,0.112106508629704,0.248408113281217,0.199445338769371,0.201308353336487,0.233508720501727,-0.175334842386598,-0.194172978028544,-0.178617976839354,-0.0162214477426912,-0.240137415382933,-0.240137415382933,-0.240137415382933,0.572525718573479,0.485945258042863,0.453951370769885,0.232482911856434,-0.129324140186858,-0.0692150207758583,-0.140596010606484,-0.0941856497532625,-0.101978537391335,-0.167234088416318,-0.0926846177176406,-0.0743691769046451,0.402400646590239,-0.024551191615151,-0.175334842386598,-0.11171078108007,-0.15857372450663,-0.175334842386598,0.642258977003258,-0.146140923465252,-0.125928483317172,0.710891633883785,-0.193491332785725,-0.240137415382933,-0.240137415382933,-0.175334842386598,-0.157252321063203,-0.20013705598172,-0.209519816026876,-0.175334842386598,-0.126641911701263,-0.162795768319376,0.0636014477111035,-5.0588454492349e-05,0.141549954152652,0.338601943689909,-0.0801664428717428,-0.19520214307638,-0.0643876359006902,0.132491304844176,0.0398373867159628,-0.0593171878596141,-0.0217393551154453,0.258832069241384,-0.175334842386598,-0.0099306099408814,-0.0746678953065383,0.0901266774511424,0.448626745604023,0.752684005772194,0.811900187704007,-0.0853004777632387,-0.240137415382933,-0.240137415382933,-0.240137415382933,0.0637444806365524,0.0892300250870512,0.113223990184959,0.227056367451181,0.178121086355448,0.185987063776396,0.187547046071879,0.303681181560299,0.284236188183268,0.247944460726776,0.326113680572283,0.396801165460276,0.497453899306835,0.301446625637166,0.387267632133966,-0.161431941189861,-0.165680471227215,0.806781599209025,0.530911478438324,-0.124755836728141,-0.0386300107581644,0.130608221992949,0.188293483360658,0.288337244805419,0.304683897503011,0.515720982415206,0.372152042611556,0.442181261064378,0.444907676256208,0.381180126504746,0.566471867065386,0.621294149942634,0.739721357947007,-0.0296911669233193,0.0505263665458092,-0.0203554172495935,0.119457745055927,0.0466943579572459,0.14862881795967,0.15326117779605,0.150739838931044,0.0603081543317025,0.182409983291868,0.282972000049241,-0.0537051271300292,-0.162936311735049,-0.105420546699343,-0.0892165767418503,-0.0102083448848794,0.0445650643405942,0.0319077184255381,-0.0640674744171904,-0.0239633739271783,-0.0048221344303605,0.158872239325447,0.218277172326552,0.25227259056144,0.224760158285396,0.174674359821242,0.504560430623549,-0.0218640564736512,-0.0284054027504019,0.156623272124193,0.231722560461129,0.358826849071854,0.488681114939715,0.511720813088214,0.434318278027052,0.444943524782936,0.42664942315475,0.533282803433681,0.45923275701501,0.460197667210777,-0.240137415382933,-0.175334842386598,0.427299666022287,0.196735275849094,-0.103568744219176,-0.117507360026028,-0.211357013977445,-0.113143509364275,-0.175334842386598,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.1435931367864,-0.175334842386598,-0.146693384210405,-0.140434701637182,0.00613437409871199,0.114158909261812,-0.0730789176417773,0.148085215279635,0.177845476264964,0.221264583164276,0.00268313438675545,0.0120062030426716,0.133090725187906,0.0957550125596351,0.116655880803817,0.317139585118335,0.029157873720627,-0.054864121349282,0.192934941235588,0.270698300777922,0.316480647540455,0.0280547862721368,-0.0815486398691048,0.0339892002425856,0.0361165096807075,-0.0145146059381631,-0.0109398566008345,-0.0077569261395522,0.0571470675541463,0.383978664518621,0.517593565090744,0.372704996935639,1.08657167584142,0.926556806273809,0.831720967769939,0.965993948563245,1.00538739504271,0.580800164567107,-0.114059280266138,-0.175334842386598,0.0632227951055158,-0.10177274195192,-0.175334842386598,-0.191840913572451,-0.175334842386598,-0.169071606938007,-0.14831485736199,-0.122402602583398,0.599887123448222,-0.063568118992255,0.270067573972014,0.388933673611529,0.591750264531017,0.588922689640916,0.609287854963744,0.660279622820615,0.712360073802192,0.662426097200418,0.595724930701997,-0.240137415382933,0.006929229461651,-0.0950699822825386,-0.0671280384441624,-0.171658747645425,-0.108681758013683,-0.0900490973583706,-0.077924908538822,-0.159090733376814,-0.193149340601192,-0.142756427107856,0.0839067852626093,0.168479372864245,0.141533504662295,0.0987869022330217,-0.0229286363443702,0.0205491698487861,0.0879396441048117,0.0519794131587637,0.0637577707296392,0.0971243194500538,0.0893752725090167,0.067898696873131,-0.0360437937295593,0.0192343502234256,1.11395189838526,0.207262534424231,0.226411491392869,0.341182242751011,0.320260939004637,0.128132115900737,0.516319831678465,1.33665785958974,0.174051082780672,-0.175334842386598,-0.240137415382933,-0.240137415382933,-0.177523596796265,-0.240137415382933,-0.240137415382933,-0.240137415382933,-0.175334842386598,-0.240137415382933,-0.175334842386598,-0.130785136292497,-0.0440077981091531,-0.0428852287306459,0.247150997186447,0.0227275181120705,0.166390590631588,0.21836423440359,0.145758048853463,0.1389841764365,0.120988519381056,0.171698459346593,0.0952269929706773,0.169831911942491,0.223235411803346,0.199820431553009,0.136104995018444,0.13890704471775,0.186360799310577,0.215748745080422,0.239393894504259,0.142797834790366,0.148796282226608,0.217409061299879,0.126700440038274,0.272125605105827,0.13616248616725,0.296083672072442,0.186081505011691,0.163939647524799,0.251716359060513,0.302458342432962,0.236630372146254,0.119094643253457,0.168958108537154,0.456492782791374,0.570049847918029,0.491410404133286,0.496632279563482,0.297494686954519,0.281118035844483,-0.0325109564746449
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0004119!1.92e-14!118;UBERON:0000925!1.92e-14!118;UBERON:0006595!1.92e-14!118;UBERON:0001007!1.14e-13!116;UBERON:0001555!1.14e-13!116;UBERON:0007026!1.14e-13!116;UBERON:0000160!9.38e-13!31;UBERON:0004921!1.03e-12!114;UBERON:0005409!1.49e-12!47;UBERON:0000344!1.68e-09!15;UBERON:0001242!2.15e-08!13;UBERON:0000060!2.15e-08!13;UBERON:0001262!2.15e-08!13;UBERON:0004786!2.15e-08!13
|tfbs_overrepresentation_for_novel_motifs=0.491922,0.217198,0.464605,0.535892,0.346849,0.550971,0.645383,0.247459,1.31693,2.04718,1.46067,0.632897,0.247704,0.6581,0.364314,0,0.856992,0.338549,0.232269,0.442204,0.426133,1.17476,0.657163,0.345236,0.472505,0.686615,0.223823,0.572827,1.02135,1.0231,0.558142,0.960397,0.892985,0.204204,0.956447,0.0363535,0.326478,0.629145,0.303703,0.752287,0.342638,0.56353,0.327433,0.366415,0.659176,0.524258,0.77511,0.589246,0.594982,0.397446,0.839084,0.714419,0.517905,1.10437,1.12205,0.66551,0.406788,0.619643,0.614918,0.663395,0.939962,0.724164,0.742129,0.827522,0.677043,0.869046,1.2599,1.61148,0.935192,1.46355,1.1311,0.253541,0.11437,1.156,0.599223,0.57254,0.589776,0.763395,0.922432,0.430551,0.254777,0.874787,0.722675,0.676326,1.03903,1.17421,0.0610418,0.181203,0.780154,1.77427,1.33021,1.04409,0.973447,0.35304,1.47187,0.281222,0.244935,0.976308,0.775372,0.160254,0.326561,0.960112,1.08669,0.839694,0.838613,0.563071,0.8998,0.585058,0.435642,0.428007,0.484547,1.0885,0.431734,0.605144,1.33732,0.340765,1.87959,0.53982,0.858327,0.322606,1.16147,0.805995,0.688501,0.762461,1.39185,0.926209,0.65384,0.966541,1.25836,0.356163,1.06946,2.25421,1.2285,0.679647,1.35909,0.106956,0.500709,0.564999,1.30952,2.14327,1.74232,1.26465,0.700956,0.971067,0.831964,0.564002,0.778321,2.10357,0.503174,1.64681,0.540361,0.667976,1.10596,0.783181,0.678689,1.18867,0.71546,0.376898,0.48935,0.500417,1.31911,1.03816,0.926663,0.482185,0.82857,0.671017,0.325308,0.63125,0.895201
}}

Latest revision as of 16:39, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr11:100247493..100247519,+p@chr11:100247493..100247519
+
Mm9::chr11:100259054..100259106,-p1@Jup
Mm9::chr11:103224745..103224772,-p4@Arhgap27
Mm9::chr13:38243280..38243291,+p3@Dsp
Mm9::chr13:38243302..38243313,+p6@Dsp
Mm9::chr17:47573565..47573588,+p1@AI661453


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
endoderm-derived structure1.92e-14118
endoderm1.92e-14118
presumptive endoderm1.92e-14118
digestive system1.14e-13116
digestive tract1.14e-13116
primitive gut1.14e-13116
intestine9.38e-1331
subdivision of digestive tract1.03e-12114
gastrointestinal system1.49e-1247
mucosa1.68e-0915
intestinal mucosa2.15e-0813
anatomical wall2.15e-0813
wall of intestine2.15e-0813
gastrointestinal system mucosa2.15e-0813


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.11.03722
MA0004.10.536396
MA0006.10.359699
MA0007.10.52077
MA0009.10.987341
MA0014.11.71935
MA0017.10.387481
MA0019.10.800946
MA0024.10.942716
MA0025.11.22395
MA0027.12.64231
MA0028.10.370592
MA0029.10.920529
MA0030.10.927235
MA0031.10.890871
MA0038.10.686534
MA0040.11.00009
MA0041.10.457338
MA0042.10.443591
MA0043.11.08567
MA0046.11.02391
MA0048.10.161427
MA0050.10.57678
MA0051.10.695779
MA0052.11.00829
MA0055.10.212634
MA0056.10
MA0057.10.457693
MA0058.10.436487
MA0059.10.449345
MA0060.10.275911
MA0061.10.307097
MA0063.10
MA0066.10.675169
MA0067.11.33603
MA0068.10.153907
MA0069.11.00864
MA0070.10.998765
MA0071.10.575909
MA0072.10.990133
MA0073.10.0960184
MA0074.10.638014
MA0076.10.407465
MA0077.10.968053
MA0078.10.729877
MA0081.10.473489
MA0083.11.08487
MA0084.11.66561
MA0087.11.04109
MA0088.10.358337
MA0089.10
MA0090.11.25093
MA0091.10.55008
MA0092.10.501022
MA0093.10.379257
MA0095.10
MA0098.10
MA0100.10.626021
MA0101.10.458688
MA0103.11.03097
MA0105.10.199622
MA0106.10.737893
MA0107.10.392331
MA0108.20.824407
MA0109.10
MA0111.10.515457
MA0113.10.708789
MA0114.10.304661
MA0115.11.08851
MA0116.10.944657
MA0117.11.05576
MA0119.10.459301
MA0122.11.07591
MA0124.11.28237
MA0125.11.20757
MA0130.10
MA0131.10.796279
MA0132.10
MA0133.10
MA0135.11.1226
MA0136.10.658622
MA0139.10.243463
MA0140.10.625902
MA0141.10.419361
MA0142.10.876028
MA0143.10.725672
MA0144.10.307873
MA0145.10.761789
MA0146.11.41218
MA0147.10.320675
MA0148.10.553294
MA0149.10.464445
MA0062.20.204999
MA0035.20.630778
MA0039.21.39094
MA0138.20.788113
MA0002.20.246463
MA0137.20.416331
MA0104.20.261255
MA0047.20.685741
MA0112.21.24549
MA0065.20.763394
MA0150.10.520653
MA0151.10
MA0152.10.685852
MA0153.11.13945
MA0154.11.49271
MA0155.10.822245
MA0156.10.406559
MA0157.10.843181
MA0158.10
MA0159.11.58527
MA0160.10.556423
MA0161.10
MA0162.11.53386
MA0163.11.4645
MA0164.10.658997
MA0080.21.01893
MA0018.20.669032
MA0099.20.781628
MA0079.22.41728
MA0102.21.7182
MA0258.10.290587
MA0259.10.309517
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:1262&oldid=3073261"